Array 1 50600-49564 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAZ01000012.1 Fibrobacter sp. UWB12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================================================================================================================================== ================== 50599 32 100.0 39 ................................ AAGACTTTTCAACCAAGAATGCATCGCACATTGTTTTAA 50528 32 100.0 43 ................................ AAGACTTATCTTTATTATGACGATATATCTTATCGATAATAAT 50453 32 100.0 45 ................................ AAGACAAGATATTTCCGGTAAAGGCCCGAATCGCACATTGGCAGC 50376 32 100.0 43 ................................ AAGACTGATATCTATTTCTTTCCACTCTTTCTCCTTTTTAGCC 50301 32 96.9 41 .....................A.......... AAGACGTCTCATATCTCTTTACGAGAAGTTCATGTTTTCTA 50228 32 93.8 218 ...........AT................... CAGCCTTACGGCTGCCAAGTGAGCGGCTCAGACATGCCCGTGCAAGCACGGTCGCGCCATTCGCCTTGTACACTTGTAAGACTTGGAGAAGGCATAAGAGCAGAAAGCGTACTAAAGTGTCATCCTGAGCGAAGTCGAAGGATCTAGAGCATTATGGACTCTCACAAGAGAGATTAAGACAACGGATTTGCACCGCCGTTGAACATAGACATCATGGC 49977 32 96.9 202 .....................A.......... CAGCCTTACGGCTGCCTGCTTGTCGGCTCGGAAATGGTCCCGCAAGCGGTCCCGCTTCGCTCGCCTCTGTCGCATAAGACTTGGAAAAGCGAATACCAAACAATGTTCTAAACGAAGTGAAGAATCCAGTTACTATAAAACACTCTCGAAAGAGAGATTAAGACCAAATGACAGGATACTCTTTTATCCCAAATAGACGTGC 49742 32 96.9 40 .....................A.......... AAGACCATGAAGGGCACTGTACTTGAATAAATTGTCTGCC 49670 32 100.0 43 ................................ AAGACACGTCCTGGCCGTGAGCAGCAGCCATATCCTGCTGGAG 49595 32 93.8 0 ...........AT................... | ========== ====== ====== ====== ================================ ========================================================================================================================================================================================================================== ================== 10 32 97.8 79 CCCTGAAAAGCGATACTCTCGCAAGAGAGATT # Left flank : ATTCTGTCTGCGAGTATGCCGCTCCGTTTTTGGATTGGCTTGCGGCAAATGTGGCCAATGGCGATGTCGTGTGGGTGCAGGGCGAATGGGGCGTAACGGTGAGCGTGCTAGACTGGTGCCGAGCACGTGGGGTGCGTTGTGTTTATGCGACGACCAAACGCGAGGCGACCGAAGTCCATTCCGCTGCGGGCGTGCAAATGACGCACGTCTTTGTGCATGTACGATTCAGGGATTATCCAGTGCCGTAATGCGGTTTATAAGCCGTTGAGGCCGAAAAAAGAGTATATTTATAGAGCCTAGTACGGGATACCGGGCTGCAAATTGACATTGTTGCAGACAACATTCGTGTTACCATGTCGAAATTGAGCTAAAAACGCCATTTTCGACCGTTTTTCAGGGCAATGCAAAATAATGGTTACAAATAATTTAGTGCTTGGATGGGCAGTTGTTACTTTTACCCCTCTGGAAGCCTTGATTTTCAAGGGTTCTGGAAGGGTACT # Right flank : GCAGCCTTACGGCTGCCAAGTGAGCGGCTCAGACATGCCCGTGCGAGCACGGCCGCGAAAAACAAGCATAGTCTAAAAAACACGAATAAAATTATTATCTTTAAAAAGAGGATTCTTCAAATGCTTTGGCCTACATTAAAAATAACACGCGCACGATACAGCCTACTAGCCGAAAAGCCAGAGCGTTTTTCTCAATTTCCAGAAGCCTGCATACGCGGGGCAATGGGCTACTATCTGAATGATTTAATTTGTTCATCAAATGATTCCCATTACCATTCTCAAAAAGAACAAGCCATATGCCTCTATGAATTGTTAATCGGACCATACGGCGACAAACAGGATGAACCTAAAAAAGCCACACCACCAAGACTATCAACAATTTTCATAAAACGCAACAATGCCAATAAACATTTATTCGAATTGGAATTTACCACATTCGGAAACAATCAAGACTTGCTGAATTTATTTTATCAGATATTAGTCGATTTAGGCAAAGAGGG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-3, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTGAAAAGCGATACTCTCGCAAGAGAGATT # Alternate repeat : CCCTGAAAAGCGATACTCTCGAAAGAGAGATT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 62737-61825 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAZ01000012.1 Fibrobacter sp. UWB12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================================================================================================================================== ================== 62736 36 100.0 37 .................................... GATACCATCGCCAGTGGTACCATTCGAGAATTCTGTA 62663 36 100.0 38 .................................... ATGTGACCCCATTCGAAGAAGCCGTCCGGATCACTCTG 62589 36 100.0 37 .................................... TAATAGCAGATGCGACAATAATTATAATGCCGTAAGC 62516 36 100.0 40 .................................... TTTGTACGTACGGGTACATTCGTCTACGAACGATTCAACA 62440 36 100.0 37 .................................... ATAAGATCTTCTTCGGCAAGAAGCTGAAAATGATTCG 62367 36 86.1 187 ....................A.........GGCA.. CTTCGGTTGCGTGCTTATCGATTTGGAAATGGGCTTGCGAGTAACTCCGCTTCGCTTGCCTTGGTCGCAATAGATTTGGAAATGAGTCATCTTGAGCGAAATTAAAAGATTAGGGTTTTGTCGGGACTCTTGAAAAAAGAGATTAAGACAAATGCGGACCATTGTAGAAAATGACATCCTTCGGTTT 62144 35 77.8 97 ..A........T.GT...A........A...G.-.. CTGTCGGATACCTGCTTATCGGATCGCAAATTGTTCCGCTTCTCTCGCCTCGGTCGCAGTAAGGCGGAAATGTGTCATCCTGAGCGAAGTCGAAGAA C,T [62112,62138] 62010 36 80.6 36 T..AG.G..TT.......T................. ATGTTTTCTTCAGCTTCGACTGCCTTGTACTTGGAG GG [61996] 61936 36 80.6 39 ....C.....TT........G..T..G........G TTTTTCCTGTTTCCATGGTTAATCAGCTGGCGATGATGC T [61932] 61860 36 86.1 0 T..........T......T.............C..T | ========== ====== ====== ====== ==================================== =========================================================================================================================================================================================== ================== 10 36 91.1 61 CCTGAAAAGCGATACTCTCGCAAGAGAGATTAAGAC # Left flank : TGCCTTTCAACCGGGTTTCGTGTGCAAAAATCGGTATTCGAGTCGTTCATGGAGCATTCGCAGCTAGAACGATTTGAGGAAAATGCGGAACGGATCATCGACCCTGAAACGGATTCAGTCCGCCTTTACCCCATTGATTCGCAGGCGGATGTTGGAATACGGATTGTTGGGATTGGGCACCGCATAGAAAATCCTGCTTACAAAGTGCTTTAACAAGCCATAATTCCCCCGCCTTTGTAAAACTCCTTGCGAAGGTAAGGGACCCCTTGGAGCAAAAAAGTGTATATTTATTGCGTCTAGTACGGGATACGAGACTGTAATTTGACATTATTGCAGACAACATTCGTGTTACCATGTCGAAATTGAGCTAAAAACGCCATTTTCGACCGTTTTTCAGGGCAATGCAAAATAATGGTTACAAACAATTCAGTGCTTGGATGGGCAGTTGTTACTTTTACCCCTCTGGAAGCCTTGATTTTCAAGGGTTCTGGAAGGGTACC # Right flank : GCACCGAGCATGTTGTTAACGAATGCATAACGGTTGCTTTCCGCAAGCCCGTTCTCACTCGAGTGGTGGCAATAAATGTTTGTCTGTAACAATGTGTTTTAACCAAAATTTTTTATAGAAAATTCTTGACAATCGCAATCGAATAAGTTATATTTAACTCCATTACCCAATAGATGGTAATGAAAGGATTTTCAATGTTTATAAAAAGCAAAAAACAAACGAAATGGGAAGGTCTTCGCGACTGATTTCTTTGTTGTGCTTAAAAAAGCCTGCTAAGTGACGGACGCGAATGTGCGCCCGTTTTTTTTATTCCTTAAACACGGCGTTTTGACGTTGTAAAATATTCACTTAGAACGAGGCTTTTATGTTTATTATCGCTGCAGTTATTTTGTCCGAAATATTCGATCTCTAACCAACCTCAACCAACATACAACATAAACATCAGGAGTAAAACATGATTCCATTAATACCGATGATTGTTGCAGCAGAGATTATTTCTG # Questionable array : NO Score: 3.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:-2.34, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGAAAAGCGATACTCTCGCAAGAGAGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //