Array 1 182602-179952 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCOV01000019.1 Klebsiella pneumoniae strain COL-Kpn95 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182601 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182540 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182479 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182418 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182356 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182295 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182234 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182173 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182112 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182051 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181990 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181929 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181868 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181807 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181746 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181685 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181624 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181563 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181502 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181441 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181380 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181319 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181258 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181197 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181136 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181075 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 181014 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180953 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180892 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180831 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180770 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180709 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180648 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180587 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180526 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180465 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180404 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180343 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180282 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180221 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180160 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180099 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180038 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179980 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //