Array 1 181984-180796 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL987999.1 Fusobacterium varium ATCC 27725 supercont2.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 181983 29 100.0 36 ............................. TGGGCCACATACTTGTAGAGGTGTAAGGAAGTCTAT 181918 29 100.0 36 ............................. TATAGTCCACAGAATTAAAAATCATTTCGTTAATGT 181853 29 100.0 36 ............................. GGTGTAAAAATAATTTTTAAAGGAGATAATAAATGA 181788 29 100.0 35 ............................. ATATAGCTCACTTAAATCAGTTGCTATACTTAACT 181724 29 100.0 34 ............................. AGTTTCTCATACTTATCTCTTAATATATTGCCTG 181661 29 100.0 34 ............................. CAGTAGTATAACTATATTCATAAATACATTCATA 181598 29 100.0 36 ............................. ATTAAAAGAAATTCTAAAATTGAATCTAACACTGCT 181533 29 100.0 36 ............................. GACACAGGACTTAAAAGTATTAGAAAGACTAAGAAA 181468 29 100.0 35 ............................. TATAAGTTAATTCAGTATCTCTTTTCTTGACCAAT 181404 29 100.0 35 ............................. TCTACTGCTCCTGTCATACTGTAAAACGATAAATA 181340 29 100.0 36 ............................. TTATATATATAATCCTTTAGGTCCTTTATATTTAGT 181275 29 100.0 36 ............................. ACACTTTTAAGAACCTTTAACATTTCAGCATTTTCT 181210 29 100.0 36 ............................. TATAATAACTCCTTATATTTCAGCTTTTTTCGGAGT 181145 29 100.0 36 ............................. CATCTAAACCAGCTTAAAACTATAAGAGGTATTCCT 181080 29 100.0 35 ............................. ATACAAAGTAGTATTTGAATAGAAATATTATATAA 181016 29 100.0 35 ............................. GCAAATCCTACACATAAAAAAATGTGTAGGGTTTT 180952 29 100.0 36 ............................. AATAATTGAAAATGCAGATAATGGAAGAGATGTAGT 180887 29 100.0 34 ............................. ACCTCTAGTTGATTCGATATATCAATTGCTCCAA 180824 29 79.3 0 A.......TC....GAT............ | ========== ====== ====== ====== ============================= ==================================== ================== 19 29 98.9 35 CTTGAATAGTAACTTGGAAGTTTTTAAAT # Left flank : GAATTGTATTCTCCCTTTTCTCTCATCTCTCTAAAAGTAGTTATTCCTATTATTGGTTTCAATTATTTTTCCTCCTCAACATCTCTTTGTTCTATTACATTCTACTATATAATATACTCTCTAGCGAAAGTTTTTACAATACAGAATTGAAAAATAATCTCAATATATATTTTCACATATAGCTCAATTTTGAAATATTTCATATTATTTTAATAAAAACAAACAAATTTTTCTAAACTTTTTAAATTTTTATTAATATAGTTAGGCAATTACAATATAAGAATTTTGTTATATAAAAAATAAATTACTTGTATATTCCTACAACATTATAATTTTTATTTTCCAAGTTAAAAATTGTATTTTTTACAATAGCATTCTTTAAGATTATTTATTTCAACATCAGTAATTTATAGTATATTTGTTGGAATTTTTTTACTTAATATGTTATAATTTGTACATTAGCAAGCAATAAAATATTAAGAAAGTTTAAATTTATGACC # Right flank : ATACTTTTCCATCAAATTCTTTCTCAGCAGTAAGATTGAATCTCAACTCATAAGTTTTCTCCCTTTTTCAAATAAAAAAGAGAAGAACTGGATATTAGCTCATGACATTTTGCTATATCTTCAACTTCTCTAAAATTTCAAATTCTTATTTTATTACATTCTTAATGTTAATTATTTATTATTAATTACTTATCGAATAAAATATCAAGCTCCATTAATAAGTCATTATATCTTTTTAATTCATGATTTTTTACTGGAATTAATAGATTATAAATACAATGCTGAAACACATCTGCATCTTTTAGTAATTCATCATATTCTGAATCTATCCTTTCCTTATTACTATGGTTGTGAATGGCTGTACAGATTATATCAATTTCTGTAGAAGTTGCCACCTGTAATTTTCTAATATTTTACGAGCCATAATTGCTCCTTTTTGTCCATGATCTTTTGAATATTCAAATTTATAAGTGTATATATCATGTAACATTCCAGCCATA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAATAGTAACTTGGAAGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1088375-1089183 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL987995.1 Fusobacterium varium ATCC 27725 supercont2.1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1088375 29 100.0 37 ............................. TGGTTCTGGTATAAACTTAGTAAGACAGTTTAATAAT 1088441 29 100.0 36 ............................. AATGCTTTAGTTCCTACATTAAAAGCAAAACTAACA 1088506 29 100.0 37 ............................. TAAAAAAGCTTCTTTTAAAAGCTCTTGTTGTTTTCCT 1088572 29 100.0 36 ............................. AAAATATTTTGATAAATTTAAAAATTAGTGTAAATA 1088637 29 100.0 35 ............................. TCTAATAAAAGTGAAAAAATAGATGAATTGTTTCT 1088701 29 100.0 35 ............................. TCTAATAAAAGTGAAAAAATAGATGAATTGTTTCT 1088765 29 100.0 36 ............................. TCTTTATATTTTTGCACTTAAAATGCACTTAAAAAA 1088830 29 100.0 36 ............................. TCTTTATATTTTTGCACTTAAAATGCACTTAAAAAA 1088895 29 100.0 36 ............................. TTTAAAGATGTTCCAGCCATACTTCCTTTTATTCCA 1088960 29 100.0 36 ............................. TTAAAATTTTAAGTTTATATAGAACCTATAGTCATT 1089025 29 100.0 37 ............................. TTGTATTCCTCATAAACTTTATCAAAATGTTCACCTG 1089091 29 100.0 35 ............................. ATATTTAAAAAATAGCTCTCTCTCCTCTTATCAAA 1089155 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 13 29 100.0 36 GTTGAATAGTAACTTGGTAGTTTTTAAAT # Left flank : ATGTGGCTGGGAAGTTTTATTGCTAAGTATATTTATATGAGAATAAAGTTTTTTATAAATAGAATAGGAAGTAAAGGAGAGCAAAAAGAATATAAGATTATAAAAATGATTATAGATCAGAAAAGATATTTTAAAAAACCTGGAAGCAAATATTATATTAATTTTTATTATTTAATTGCTGATGTAAATGGAGAAGAGGTAAAATTCCTTATAGAAAAGGAGTTTTATGATAAGTATTTGGGAAAAAAGAGTATGAATATTAACATAAAAAAAGGATCACTTGGAATTTTTTATGGAATAAATTTAGTAGATTTAGAAACTAAATAAATTTTCCAAGTAAAAAATAGTACAATTTTTTCTAAGCTAGATTTCAAAGTAAATTGAGAAAGAAAAAGTTGTTTGATAAAAATTTTGATGAACTTGGAAAAATAAAGATAAAATTTTGGTAAAATTATGGTTTAAAGATGAAAAAATAAAAAATGAAGTTTAGTTTGATGAGG # Right flank : TAGCAAAGTCGAGAGTCTTTATATGATTGATTTTACAGTTGAATAGTAACTTATAATAAAAATTTTAAAATGATAGGAGATGATAATCTAAATAAAAAAATTCTTTTAAAAAAATTAAAAATTTTAAATTAATGACTATTATTTATTAAAAAATGAGGTATAATTAATATTAAGTATTAAAAAGGAGGGATGAAATGGAAAGTTGGGTTTTAGAATTAAAAGTTTTTTTATTGGAAGATATAGAATCACATAGTGCTATAGAAAAAATAGCAGCTCTCATAGATTCTACTTTTGATAAGAGTGAATATTGGAAAAAATATCATAAAGATAAAAAAGTAAAAGAATATTGTTTTAATTCTTTCTATCCGGTAAAAGTCAATGCCCAAAAATACAATGCTGGAGAAATATATACAGTTCAGATACGAACTATCTCTAAGGAATTGAAAGAGCATTTTATGAAATATTTGAAAGACAATATAACAAAAGAATTAAAAGGGCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACTTGGTAGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 1098293-1099876 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL987995.1 Fusobacterium varium ATCC 27725 supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1098293 29 100.0 35 ............................. TTGAACAATAGAAGTACTGATCTTCCTAATTTCTA 1098357 29 100.0 36 ............................. GGGTTATGTACTACTAAGTCAGGAGCAATGGAAGGT 1098422 29 100.0 36 ............................. GGCATATCCTCTATCTTATTTAGTTTATCTAACTTA 1098487 29 100.0 36 ............................. AGGTATTCTAATAAAGAAGTTAGAACATTTAGATAT 1098552 29 100.0 36 ............................. AGAAAAAATATTATCAGTTCCAGATAAGATGTTTAG 1098617 29 100.0 36 ............................. AAAATATACTGAGCCACATTCAATATTTTTTCCATA 1098682 29 100.0 36 ............................. TTTTTAGGTGTTGCAGGGTATAGAGGTGTAAATGTA 1098747 29 100.0 36 ............................. TGAAATTTAAAGTAAAAATTAAAGAAACTCAATTAG 1098812 29 100.0 36 ............................. ATTTGAAAATCATTATGAAAATGTAAGTCATGAAAA 1098877 29 100.0 37 ............................. TAAAAATATAACTTATAGTCCAGAAGCTTATTTACTA 1098943 29 100.0 37 ............................. TCTCCCTGTTCTATAAGAATATTTTTTCTTATGTCCA 1099009 29 100.0 35 ............................. TATGTAAATTCATATTTTTTTAAAGATGCATGGAT 1099073 29 100.0 36 ............................. AAAAGGAGAAATAAAGCTAAGAAAAAAAAGAACAGA 1099138 29 100.0 36 ............................. TACAGCTTTCTAGCCATTATTATTTCTTTGTATGCT 1099203 29 100.0 35 ............................. TTTTGAAATTTTAGGTTCATTTCTTCTGTAGTCAA 1099267 29 100.0 35 ............................. ATTCAGATATAAAAGTACCAGCTCTGAAAGTTTGA 1099331 29 100.0 35 ............................. TTTTACCCCCTTAACTTTAAAAATGCAATTAATTT 1099395 29 100.0 36 ............................. CCATTAATAAAATCCATTACTGCACTATCTATTTTA 1099460 29 100.0 36 ............................. ATTCTTATTTTGTCTAATATTTTATATCCTGTAATC 1099525 29 100.0 36 ............................. ATTCTTATTTTGTCTAATATTTTATATCCTGTAATC 1099590 29 100.0 35 ............................. GGAATTAATAAAACAAAATGGTTCATGTGCAGGTG 1099654 29 100.0 36 ............................. AAAAGTATTATTTTTTCTAACTTCATTTTTCAAATT 1099719 29 100.0 36 ............................. ACCAACTTATAAAATTATATTTCTTGCTAGGAAAAA 1099784 29 100.0 35 ............................. CATATATAACTACTGCTACTGCTATTTGTTACAAA 1099848 29 96.6 0 ..............C.............. | ========== ====== ====== ====== ============================= ===================================== ================== 25 29 99.9 36 GTTGAATAGTAACTTAGAAGTTTTTAAAT # Left flank : GAAAATAAGGAATTTATTCCATTTTATATGAAGGAAAAGATGTAAATGAAAGGTAAAAACTATAACTATGTATTTCTTTTTTACGATATAAATGAAAAAAGAGTAAATAAAGTTTTTAAAATTTGTAAGAAGTATTTAAGTCACCACCAAAGATCTGTATTTCGTGGAGAAATAACACCTAGCAATTTAATAAAAATGCGATTAGAATTAAAAGATGTTATTGACAAAAAGGAAGATTTTATAAGCATTGTAAAATTGATAAGTGAGCATTATTTCGATGAAGAGATAATAGGAACACCTTGGAAAGATGACGAAAATATATTTATATGATTTCCAAGTCCAAAAGCTAATAATTTTATCAAATAATTATTTTAAAAGGGATTGAGAAGAAAAAATTTATTTGATAAAAATTCTAGTAAGCTTGGAAAAATAGAAAGAAAATCCTGATAAAATCATAGTTGAAGATATTAATTAATAATAACGAGCTTGATTTGATGAGT # Right flank : TAGAAAATATTATATCGTTGCACATGTGCAATGATATGATAGAATATAAATTTATTAACTAAATATAAAAAACAGGCTAAGAATTTTTCAGCCTGTTGTTATGATATTAGCAGTTCCTAAAAATTGATTTTTAAAGAATAAGTATAAAATATCAGTATCTAAAGGATTGTATTTAACAATAACTTTTTTTCCTTCCAATGTGGTTAAAAAATTATTTGTATAGATAAAATTATTAAATCTTAAAGAAGACTTACTTATTTTTCTGCTGGCTTCCTGAAGAAAGACATCAAATTCACGAACGTTTGAAATATTTTCTACCATTCCATATTTGAGTGTAAAGTCATATTTTTGATTATCTAAATAGATATATGAATCAAGAAAACTTTTCAAATTCTGATATGAAAGATTTTTATTATTTTGGTAATAAAATTTTTCTATATCTTCTTCTAGAAAAGAGATAAACTTTTTAATTTCTTCATTCTCACTAAAATATTCAGTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACTTAGAAGTTTTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //