Array 1 47200-48358 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABACJ020000029.1 Faecalicatena sp. AGMB00832 Contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 47200 32 100.0 33 ................................ ATATCTCATGCCTCCTAAACTTTAATTTATTTC 47265 32 100.0 33 ................................ ACAACAACTCCTCTGCATTTTTTTGTGATCGTT 47330 32 100.0 35 ................................ CATTGTTTATCGTCCTGGCTGGAGATATTATCTCC 47397 32 100.0 32 ................................ GTATCCTAGGGGCGGCACTCGATAATGTAACC 47461 32 100.0 35 ................................ TACTATTATTCCATCTTGCTTTACAGATACTGCAA 47528 32 100.0 34 ................................ GTCAGATAGCCCGGAGAACGCTTTCGCAGATTTT 47594 32 100.0 34 ................................ CGGTGACACTGGATGGAATAGAGTGTACCTTGAC 47660 32 100.0 35 ................................ TCCCTTTTGACCCAAACGTCTCCCGTCTGGAAATC 47727 32 100.0 34 ................................ CACCTCCCTTACGCAGGAATCCATCGGACTATAT 47793 32 100.0 34 ................................ TTCTGGTTGGATGTCCTGTAACGCCCCAGAATCA 47859 32 100.0 34 ................................ TTCGACATTGTTGACGCATCGTTCGCACAGACAG 47925 32 100.0 35 ................................ CTGGAGCCACTCGTTAAGAATATTAAATCCCAGGT 47992 32 100.0 38 ................................ TTGTACAAATAGCTCATCTTTAGTAACAAGAAGTGACC 48062 32 100.0 33 ................................ AAACCAAAATCTTGATGATGGTGCACCAGCAAA 48127 32 100.0 35 ................................ AACCGTCTTATCCGTGCGATTCTCAAATTCTACGG 48194 32 100.0 35 ................................ TTATTAAATACATCATCAGCAATTCTCTCTACCTC 48261 32 100.0 33 ................................ GAAAATGCTCCCGCGAAAGACTCCTCGATTTTA 48326 32 93.8 0 ........C..................T.... | T [48356] ========== ====== ====== ====== ================================ ====================================== ================== 18 32 99.7 34 GTCGTTCCTCTCGCGGGAACGTGGATTGAAAT # Left flank : CACCGCAGCAGGCACTAATACGAGAGATTAAAGAGGAATTAGATGCCGATATCGAGGTTGGTGACCTGCTTAAGACAATTGAATATGATTATCCGAAATTTCATTTATCCATGGATTGTTTCTGGGCCAGGATCATAGCAGGAAAATTAATACTGAAAGAAGCAGAGGCAGCCAGGTGGTTAGGAAAAGACGAATTGGATTTGGTACGATGGCTTCCAGCAGACTTGTATATCATTGACTTGATAAAAGAGATTTTGTAGTGACTTCAAGGAATTTAAAAATCTATTCTAAAATGGGGGAAGAAGCTTCGGATGAGCTTTTGCTATTATAGTGCGAATAGGAAGCACACATGAAAATCCCGGGAGATTCGCACCAAAAAAATTGCATAAAAACTATAGATTTTATTGAAAATAAGTTTTAAAATAAGAATATATCTAAAGGATTTGTGAAATGGTACAAAATATTTTGCTGTTTTACAATAGAATTTAGATATGTTTGCT # Right flank : TGTACCAGACAGTGTAAAAAATCTCAAAATCAGTTCTTCTTCACGAGAGTGAAAGAACAGACCAGACCGAAAAATAGGGGGGATGAAGTCGTATATGGATTATTTAGCACATATCAGTGAGGACAAGCAGCGTGAGCAAAGTGTAAAAGCGCATTTAGAAGGTGTCGCAACGTATGCGGAGGAATTTGCAGCAGAATTTGGTTATGGTGACTGGGGATTTTGCTGCGGTATGCTCCACGATGTAGGAAAATACACAGCAAAGTTTCAGAGCCGTATCCGCGGAAGTGAGGTAAAGGTCGATCATGCTACAGCAGGAGCACAACTGTGTCAGAAGTTGAGTAAAGAAAAGGGTGGTTTTTATACAGCGCTTGCCTATTGTATTGCTGGTCATCATGCAGGTCTCCCGGATACGGGAGGAAGTGCTGACACTGGAGACAGAGGAACATTCATAGGAAGAATGAAGAAGAACACAGAAGACTATGAAACATACAAAGAGGAAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCTCTCGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 2 56113-57137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABACJ020000029.1 Faecalicatena sp. AGMB00832 Contig_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 56113 32 100.0 33 ................................ TGCGATATTCTTGATATATGTACAATCCGTATA 56178 32 100.0 33 ................................ ATACTGTCTTACATCCAGCTCATAATAACTCAT 56243 32 100.0 35 ................................ TTATGAAATAATTATAGATGGGAAAAAAACAAAAG 56310 32 100.0 33 ................................ TAAGGACATTTACCTGTGATCTTGATCCGGATG 56375 32 100.0 34 ................................ TAATTTTGAACAGCTCAATAATATAAATGTTCTG 56441 32 100.0 34 ................................ CGTTAAATTAAATTGCGATTTAGTTGAAAATTAA 56507 32 100.0 34 ................................ CTTTGAACTGCACCTTGTAAATAAGGAATTTAAA 56573 32 100.0 33 ................................ GTAATCCATGATCCGCTTAATATATAATTCCCG 56638 32 100.0 35 ................................ TACTGTATCAAATTCTTTTTCCATCCTGTGGAAGT 56705 32 100.0 34 ................................ TTTTGTTTATGCCATCAACAGTTAACTTTTCCCC 56771 32 100.0 37 ................................ TGTGCATATTTTACCCATTCCTCACGTGCAAGGGCAC 56840 32 100.0 35 ................................ TGCGTCAAGAGGTCCTTATTAAAAAGTCCTATATC 56907 32 100.0 34 ................................ GCAGCATTTGGTGTGCATACTTCGCTCTCCCACC 56973 32 100.0 35 ................................ TTTAGTGCAGCAGAAATTGCGCAGCTGGCTGACGG 57040 32 87.5 34 A..........T........A......A.... TATTATATGAATCTTCTGATTAACTTACAGCCTC 57106 32 75.0 0 ...A.......TT.A.A....CA....A.... | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 97.7 34 GTCGTTCCCTTCGCGGGAACGTGGATTGAAAT # Left flank : GGAAGTGAGCCCCATACTTATATATCGGGAGGAGATACGATGCTAGTATTCATTACATACGATGTCAACACAGAATCAGCAGGCGGTAAAACCAGACTCAGGAAAGTAGCCAAACAATGTGTTAATTATGGGAGACGTGTACAGAACTCGGTTTTTGAGTGTATCCTGGATAATGCACAGTGTGTCATGTTGAAATCTATTTTGACGGAAATAATAGATGAAGAGGTGGATAGCCTGAGATTTTACTATTTAGGGAATAAGTATAAGACCAAGGTGGAACATGTTGGAGTCGATCGGGGAATTGCAGTGGATGAACCTCTGATTTTGTAGTGCGAATGTGAAGCACACATGAAAACCCCGGGGGATTCGCACCAGAAAAATTGCAAAAAAACTATAGATAATATTAGAAATAAGTTTTAAAATGAGAATATGTCTAAAAGATTTTGTGAGATGGCACAAAAGGTGGTGCTATTTTGCTGGAAAATTTGGATATGTTTGCT # Right flank : TCAAAATCCCCCTCAAATCCCAAATAGGTATCCTTCTGATTCCCCTCACGGAATCATAGACCATCAGCAAATCGTAATCATCATGGTTTGTTTTTATTACTAGAGTAAGTTGCAAAAATAAGGCAGTAATACACGGCTTTGCAGCGAAATGAAATAATTGATTGATGTAGATCCCTTATCGAATATTTCCTACCAATAGGTCAGTAACAAGCTATGCTCTTGAGATGACAACATCCCTCTGCCATAGTTTTATTACATGGGTAAATGTGGACAGATACTTAGAGGATAAGATTATAGTGCAGTAGAGAACATAGGTATACGTTCATTTTTTTTGACACGCTCTTGGTAAAGTGAGAGGAACAATGCTGTATTTCTAAAAAGGCTTGTAAAAGCCGACAAAAACAGCAAAACAGCAAACCCTAGATAGTCTTTTCCACGGCAATATGATATAATGACACCAATGGGTCAGATTGGTTTTTCATTATCTGGCAACTGTATGT # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCTTCGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1418-251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABACJ020000018.1 Faecalicatena sp. AGMB00832 Contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1417 33 100.0 33 ................................. AGCCCCCAGTAAGGCCTTGCTCCACCCATTATC 1351 33 100.0 34 ................................. TAACCAATCCAATGGCTCTCCACAAATCTGACAG 1284 33 100.0 35 ................................. TCTAATTTCTTAGCAATATCAACCAAGAGCATTCC 1216 33 100.0 35 ................................. AGCTTGCATACATCATGCAGCAGCGCCACCACTGC 1148 33 100.0 33 ................................. ATCCAGACATAGAAGATACTTATGAGAATAACG 1082 33 100.0 33 ................................. CTATTATTAATGGGATAAAAGCTCTTCCATCCA 1016 33 100.0 34 ................................. TCTAACTCTGGGTTCTGAAAACATGCGCCCTTTA 949 33 100.0 35 ................................. ATCCAGCGATTGCGGAAATATGACTTTGCGGAACG 881 33 100.0 33 ................................. AGATGAACTGATAGGATTGAAAGATTCAATATC 815 33 100.0 33 ................................. GATTTCAGAGACTGGTGATATTGATGGGGCAGA 749 33 100.0 34 ................................. TGATGAGTATATAAAACAGGTCTGTGATTGGATT 682 33 100.0 34 ................................. TACCATATACTCTAAAGAGGTGTACCTACAGTAG 615 33 100.0 33 ................................. CATCCTGTGGAATTTAATTAAATCTACATCGGA 549 33 100.0 34 ................................. ATCAACTGGGGAACGATATACAGGCCACCGCAGG 482 33 100.0 33 ................................. TTTCATGGACAGCATGTCAAGGAAGATAAAATC 416 33 100.0 33 ................................. CCGTACCGGAAAATCCGATAATGATTCCATGAT 350 33 97.0 34 ....................T............ TGTAATTTCGGTGGTCTGTTTACAAAGAGGTTCC 283 33 78.8 0 ..........A...A...C..A.AA......C. | ========== ====== ====== ====== ================================= =================================== ================== 18 33 98.7 34 GATGTCGCTTGCGCGTAGAGCGTGGATTGAAAT # Left flank : AAGAAGTATGTCTGTTAGACCAGACATATGTACAGGACAGCGATCTTACAGTTGCTAAGTATGTAGAGAAAGTAGCAAAAGAAAACAATGCTAACGTAACAGTTAAGAGATTCGTTCGTTTCGAGACAGGTGAAGGTCTTGAGAAAAAGCAGGAAGATTTTGCTGCAGAAGTTGCTGCACAGATGGCAACTAATTTGAACTGATTTATGAATTTATACTCCCCGGAAGTACCTTTTTAGCAGGTGTTCCGGGGATTTTTATGTGTAAAAGAGATAAGTAATTTTAATAATAACGAGATCGATGGAGAATATATAATCAGGTGCGAATGTGAAGTGAACAGAGATTTACTGGGAGATTCGCACCTGAAAATAGTAAGAAAATATTGAAATCAGGTGAATAAGTTAAAGTAATTTTGAATTTAGGTTGAATTTAAAGAAGAAAAGAGATAAAATTTAGGAGAATAGTACAAAAGTGAAGGAGAAAAGCTGTGCATATTTGCT # Right flank : TGCAAAAAGGATACAGTGTGATATGTCAGAAAGCAAAGTTATTCGCATCTAAAGCCTTAGGAAGAATCAATAATAGCACCAGTAAAAAGAAAAAATTATAAAAGAGGATTACGACAAAGAAGCGTAGTCCTTTTTTATTTGAATAAAAAATATGATATATCACTAAATAAGTAAAATAAATCGAAATAGAAAAGCAAATTTGTGAAAAATGAATAATGAAATAAAAATATTAGACAGATAATTTATCTATA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTCGCTTGCGCGTAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 9550-11420 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABACJ020000046.1 Faecalicatena sp. AGMB00832 Contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 9550 32 100.0 33 ................................ CTATTATTAATGGGATAAAAACTCTTCCACCCA 9615 32 100.0 34 ................................ AAACATTGCATAGTATCCCATGGATGGGGTCTCT 9681 32 100.0 35 ................................ ATGCTCTTCTCTCCAATTTGGAAACCATCATAGCC 9748 32 100.0 34 ................................ TCTTACCAGTGCCCGGTACTGCATCAGCGTCTTT 9814 32 100.0 33 ................................ ACAGAAGAGGGGAGGTGGTGCAGATGGATACAT 9879 32 100.0 35 ................................ ATTGCAGTTATCTTTGGGTGTACATACACGATTTT 9946 32 100.0 36 ................................ CTAATTAACAACTAGCCAATCGTCTCGCATTAGTTG 10014 32 100.0 34 ................................ CTGCATTTGATATAGTACTTGAGATCCAGAAGCT 10080 32 100.0 35 ................................ GAGTCCTGCCGTCCCAATCTGGTGTTTTTGTCACG 10147 32 100.0 33 ................................ GATCCATACTATCTGGTATGGCAGCTATAAACT 10212 32 100.0 33 ................................ TTGTCATAGACACGAAGGAAAATCTCAGACACC 10277 32 100.0 34 ................................ ACCCAATCATAGCTGATTGGGGAGAGGCGTGGGG 10343 32 100.0 34 ................................ CGATTATGTGTGCGATCCGAAGTGTAGATGAGAC 10409 32 100.0 33 ................................ TAAGTCATTCCGTTTACCCTGTCGTTCAACTGG 10474 32 100.0 33 ................................ CATTTATTGGTGAAATAAAGTACAATATTAGTT 10539 32 100.0 33 ................................ TACTGAATTAGTCGATAAATGTAAAGCGGATGG 10604 32 100.0 34 ................................ TTCTGCATATACTGGCACGCCTTTACCGTATTTA 10670 32 100.0 33 ................................ AATCTTCTTTTCTCCTTCCTGGCTCCCGAGGAG 10735 32 100.0 33 ................................ GCAAAGGTCAGCACGCTTCTTGATTCGAATGTA 10800 32 100.0 33 ................................ CTCATCTATCAGGTGGTCCTCTCCTGCATAATT 10865 32 100.0 33 ................................ TGCTAACACCTTACCATCTAAATGTTTGTCATA 10930 32 100.0 33 ................................ TAAACTTTTAATACGTAGATTGCTATACCCACC 10995 32 100.0 34 ................................ ACCCGTGATCCAGAGGTGAAGTACACAGATGGCG 11061 32 100.0 33 ................................ CATTGATCTGCGCCAGATGCTGATAGGTTGTAC 11126 32 100.0 35 ................................ TGCTTTAAACTTCTTTCTCGCCGATCTTCCGTTGT 11193 32 100.0 33 ................................ AAGCATGGCGGAGTAGATAAATTTATCTTTGAC 11258 32 100.0 33 ................................ AGATGCCACCCGGCCCCTTTCTTCCGGCAGGCC 11323 32 100.0 33 ................................ TTCTACCATCACTTCTGTTGTGTATACCTTCAC 11388 32 81.2 0 .....T.............CA.TTT....... | C [11407] ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.4 34 GATGTCGCTTGCGCGTAAGTGTGGATTGAAAT # Left flank : TTTCGAGTGAGAATATCCCAGAAGAACTGAAAATCATGTCTAACTGGAAAAAGAGACCATCAAATGTAAGCTATCCGCTAGGCGAAGATGAAGGCAACCGGGATAAGGTTAATGCAAAAGCTTCTCATCAATGGTTCAGGCTGAATAGAATGGAAAAGAAACAAGAAGACACTTCGGACGATGCTCTGGGAGATAACTATAATCATAATTTCTCCAAGGTTCTGCCTACTGTTGCGGAGGATGCAGATAAAGGGTTAGATCAGAAAAAAGCATTGTATAAACTTGTAAAGAAGAAACAAAGGTCCTAAAAAATATCAGGTGCGAATGTGAAGTGAACAGAGATTTACCGGGAGATTCGCACCTGAAAAAAGGAAGAAAAGAGCTTTATTGAAGCGGATTGGAAAGGGAAAATCCTAATTTAAGTTGCATTTGGAGAAGAAAAGGGATAGAATTTAGAAGAATGGTACAAAATTGACGGGGGAATATTGTGAATATTTGCT # Right flank : TATAAGTTCGTTTCTGTATGTGGCTTATGATTTGCTGATATCACTTGAAGTTAATTTCATATCTGTCATAAGCCCCTCTACCACATTCAATTCCCCTCCCTATAATTATCTCCACATTGTGAATTGCGCTATTGAATAGTTCTGCCTCAAAATGCAAAAATCCTCCAAACGGAGTCAAGTTAAAACTCCCCAGTTTGGAGGTCTATTTTTTATATGAAAAAAAGATACCCTGTAAAAAGGCACCTTTCGAGATAAATCAGTTCTATTAGAAGAATCACAAGAAAAAGTCTATTATAAAAAAGTCGATTTTTGACTATTTATCTTTTGTCCGTCCTCCCCATTAGATATTCTAAAGACACTTTGAAAAAATCTGCGATTGCAACAACTTCATAATCGGGCACGAACCGTGTGCCTTGTTCGATTCTCAAAACCGTGAGATCGTTAAAATCGTATCCGCAAAGCTGAAGCTGTTCAGCCAGGGCCTTTTGTGAGAGGTGATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTCGCTTGCGCGTAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.80,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //