Array 1 88500-91149 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTHL02000086.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0306 CRK0306_NODE_2.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 88500 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 88561 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 88622 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 88683 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 88745 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 88806 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 88867 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 88928 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 88989 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 89050 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 89111 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 89172 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 89233 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 89294 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 89355 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 89416 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 89477 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 89538 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 89599 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 89660 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 89721 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 89782 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 89843 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 89904 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 89965 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 90026 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 90087 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 90148 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 90209 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 90270 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 90331 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 90392 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 90453 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 90514 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 90575 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 90636 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 90697 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 90758 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 90819 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 90880 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 90941 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 91002 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 91063 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 91121 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //