Array 1 34061-33231 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJDLC010000007.1 Faecalibacillus intestinalis strain DFI.6.26 FOAPJDLL_7, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     34060	    36	 100.0	    30	....................................	CTAATGTTAATAGTTCTAAAACATGGGTTA	
     33994	    36	 100.0	    30	....................................	TCCCTATTTCGGTTAACGGTTTCAATCATA	
     33928	    36	 100.0	    30	....................................	CTAATGTTAATAGTTCTAAAACATGGGATA	
     33862	    36	 100.0	    30	....................................	TTGGGGACTTTTTACAGTTTAGGGTTTACA	
     33796	    36	 100.0	    30	....................................	GTGGAAAAGGAAGAACTGACGATTGTTTGT	
     33730	    36	 100.0	    30	....................................	TCTTGATAATATGGTATTGGGCTGAAGGAC	
     33664	    36	 100.0	    30	....................................	AAAGATACACACCAGTATTTTATGGCGACG	
     33598	    36	 100.0	    30	....................................	AGTCATGTCATTAACTGATTTTGGATTGTG	
     33532	    36	 100.0	    30	....................................	ATGACGATGCAAGGTTCGAAAAATCGTTCA	
     33466	    36	 100.0	    30	....................................	TGTCATATTGATATTAATACTTGATTTACC	
     33400	    36	 100.0	    30	....................................	GAAGTAGTGCCCAAGAAGAATCGTTATGTC	
     33334	    36	 100.0	    30	....................................	TAAATATTAAAGATGAAACTTGTTCCATCT	
     33268	    36	  83.3	     0	................T.......A....T...TTT	|                             	T,G [33233,33248]
==========	======	======	======	====================================	==============================	==================
        13	    36	  98.7	    30	GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC	                              	       

# Left flank :   TGAATTAATATATCCAAAATTTATAACGTATACACCTTAACAATTCTTAAAAATATTGTTACCAATATTTTTAAAAGAAGAAGATCAAGCAAATGAATATGATCTATCATATGATGAAATTATTCTATTTCAACTTAAAATGATAGATTATATATCTAAACATCAAACAACTAAAATAATTTGTCTCATAGAATTACCATATCTATCAAAAGAAATAAATGACTATCTCATAAATATGAAAAATTGCTTTATTGTTGCTATGTTTTATAAAACAAACAGTGTTTTAAATATAAAAGATACTTATATATTTGATGATTTAATAGTAGATTTAAATAATGATGAACAAATATATAATATCTATTTAAATAAAGGTGTATGCACACTACAGGAGGCAAAAGAAATGATAATAAATAATATAAAAGCTAAACTTGATATATCTATAACTCTATAAAATATTCAATATTTTATTATTTTTAAATATATGGTAACATGTATTTGAG
# Right flank :  AAATGTAAAAAAAGAGATTTCTCAAGGATGCTATTTTGAAATCTCTTTTTGCTTATAAAAATATTTACATAAAATAAAAAAACAACCCGAAGGTTGTTGCTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACACTGCTTACTTTCAACTGCTCATATATATTAGCATGAATATGAAATGATTGCAATAAAAAATTACAATTTTTTTTAAATTTATATTTTGAAGATATATATATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTACTTTCAACTGCTCAACTAGAATAGCATATATTTTTTTAAAAAGCAATACTTTTTTAAAAATCATCTAAATTTTTGAATTCAACCTTTAAAT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-85.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//