Array 1 249200-252883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBAK010000003.1 Klebsiella pneumoniae strain DGL4 NODE_3_length_436974_cov_19.007201, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249200 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249259 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249320 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249381 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249442 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249503 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249564 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249625 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249686 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249747 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249808 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249869 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249930 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249991 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250052 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250113 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250174 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250235 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250296 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250357 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250418 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250479 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250540 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250601 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250662 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250723 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250784 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250845 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 250906 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 250967 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251028 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251089 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251150 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251211 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251272 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251333 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251394 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251455 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251516 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251577 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251638 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251699 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251760 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251821 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251882 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251943 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252004 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252065 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252126 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252187 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252248 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252309 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252370 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252431 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252492 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252553 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252614 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252675 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252736 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252797 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 252855 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //