Array 1 182484-179957 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDHR01000007.1 Klebsiella pneumoniae strain SCsl6 NODE_7_length_252847_cov_99.1526, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182483 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182422 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182361 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182300 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182239 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182178 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182117 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182056 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181995 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181934 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181873 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181812 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181751 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181690 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181629 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181568 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181507 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181446 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181385 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181324 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181263 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181202 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181141 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181080 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 181019 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180958 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180897 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180836 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180775 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180714 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180653 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180592 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180531 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180470 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180409 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180348 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180287 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180226 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180165 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180104 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180043 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179985 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //