Array 1 175783-175933 **** Predicted by CRISPRDetect 2.4 *** >NC_007947.1 Methylobacillus flagellatus KT, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 175783 29 100.0 32 ............................. GCATAGAGCTAATAAGAGTAACGGCAATGTAA 175844 29 100.0 32 ............................. GCTCATTGGGACCAGAGCGGCTTTATGGCGTG 175905 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGTTCCCCGCACATGCGGGGATGAACCG # Left flank : TTCCCAAGATCGTCAAGGGGCTGAAGCCCGGCGGGATTTCCTGCTGGAGGCCTACACGCCTGGGCAATTGGAATACGGCACCGGCGGCGGCAAGGACGCGGACGCCATGATGACCCAAGCCATACTGAGCCGCGAATTGCATGGATTCGTTTTCCATTGCCTGCAGGAAGTGGAGCGCGAAGTGGTGGAAGGCGCTTACCATATCGGGCTGGCCTCGGCGGTGCAGGCGATAGCCGCCAACCCAAACTAAGTGTCAAGGAGCGAGTTGCCATGTTGAAAGTGATCGCGCAGGATTTTATCAAGCCGGAATTTATCGACCTGTTAGCGCCGCTTTGTGCGGAGCGGACCGAGAAGACATGGTAGGAGCCGAACGATAACATAGTAATGGCCTTAGATTTGTTGCTTTTTCTCCTGAAAATCAAAATGCAATTTAAAATTCCATAGTTGGTGGAAATGTAGGTGTTAATTTTTAATTGATAAATCAATAAGTTGTTTTAAGT # Right flank : GCCCACGAAAGGGCTTATATTGCGTACGACCTGTTTATTGACCAGAAAGACCCTGGGCATTTCATTTTTGTCGAGGAGTGGCCCGACCAGGCGGCGTTGGATATTCATTGCCAGACCAAGCATTTCCGGCGGCTGGTGCCGGCCATCAACCAGTACCGGCGGCAGGAAGGGATATTCCTGCTGATGGATGCGTTCTCAATGTAGCGCGGCTATAGCCATCCTATGAGCCAGCGTTCCCTCCCGGACGAGAAATCCGGCCTGCATCCGCGCAATCGGCACCGCCAGCGCTACGATTTTGCGTTGCTGGTCGAAGCCCACCCACCCCTGGCAGCGTTTGTCAGGCTCAATCAATATGAGGATGCCAGCATCGACTTCGCCGATGCGCAGGCCGTCAAAACCCTGAACCAGGCTTTGCTCAAGTGTTACTACGGCATCGCAGCATGGGACATCCCGCCGCAATTCCTCTGCCCGCCGATTCCCGGCCGGGCGGATTACGTGCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCATGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 632592-638755 **** Predicted by CRISPRDetect 2.4 *** >NC_007947.1 Methylobacillus flagellatus KT, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 632592 33 97.0 32 ................................A TGTTTGGCACAAGACCAGCGGTTGAACGCACC 632657 33 97.0 32 ................................A TGAGGTCGCGGAAATCATCCAGGGCGCCGGTG 632722 33 97.0 35 ................................G AGTCAAAGACAAGCACCGTCCGCTGCTCAATCAAA 632790 33 97.0 32 ................................A ACCAGAAGGGCTGTAAGGGATTCCAGACTGAA 632855 33 100.0 32 ................................. GATTCAACGTGAATGGCGCAGTGGCCGGGCAG 632920 33 97.0 36 ................................A CCATCATGGCAGACGGTGAGGATGACAAAGAAGGGC 632989 33 97.0 33 ................................G CTTCAGCGCTAGGTGCCGTTAGGCGTTGGGGAG 633055 33 97.0 33 ................................T TTGCGTAATAGGTTCTGCTGGAATAGTGACTCG 633121 33 100.0 33 ................................. GCCTTCGGCCCACGTTTTATAGTCGTCGTACAG 633187 33 97.0 33 ................................G TGCGACACCCATCCGCCAGACTGCTTGCCGTCA 633253 33 100.0 33 ................................. ATCCGGGTACGTCTTGCCGCCCATAATGCCAAC 633319 33 97.0 33 ................................A TATCTGACACCCGTTGATTTCCGTCCGTCCGAC 633385 33 97.0 33 ................................A TCTCGAAACTAGCCACCGCAACGGGTTCACCTT 633451 33 97.0 34 ................................T TGTCTTTGTTGCTCCATACCACCAGGGAGTTATG 633518 33 97.0 35 ................................T TCTCAACCCGGTTTCTCATTTCTCCAAGCTGACGC 633586 33 97.0 38 ................................G CACTGTCATGCGCTCAACCAGGTAATATGGCTGAGGGC 633657 33 97.0 33 ................................G CACAGGACAGAATGACCCCGGATCTGTTCGGTA 633723 33 100.0 34 ................................. TGCGCGTTGTGCAACAGCCAGCTTCGACTCCAGA 633790 33 97.0 35 ................................A CCATCATGGCAGACGGTGAGGATGACAAAGAAGGG 633858 33 97.0 34 ................................A TAAGTGTTCAATCTGTGGTCACTGCGGTGAGTGG 633925 33 97.0 34 ................................T AAGGTTGTGTGCTCTAACGGTTAGAGTGTGCCTG 633992 33 100.0 34 ................................. TGTGCTGCCAGCTTGTAGTTTTCAAAGCTAAGTG 634059 33 100.0 34 ................................. TGACGGCGCTCCCGCATGAAGTCCTCCAGGTCGC 634126 33 100.0 34 ................................. TGCGGCAACTATTCAGCTTGCTGATGGCGAGCGC 634193 33 100.0 34 ................................. AGACTGAATCCATCGGTTAAGTAGAGTAGATAGC 634260 33 97.0 33 ................................T ACGATCTTACGCACCCTTGCCCGACGGGTTTAT 634326 33 100.0 33 ................................. GAATGCCATTGATATGGTCAACCTGATGGGGCC 634392 33 97.0 34 ................................G TTTTAGCTGGTCGTTTGCAATTTCATAAACAGTC 634459 33 97.0 34 ................................T CCAAGCTGACGCTTGTATGAGCGTTCCATGGCGG 634526 33 97.0 33 ................................A ACGACAAAGCAGAGAGTGTCGCTAAGTTTATCC 634592 33 97.0 35 ................................A AATTGATTTAATTCAAACTCGAAAACATACCGGCC 634660 33 97.0 33 ................................G TGAAGCCTGTTTGCTGGATCCAGAAAATTGCAT 634726 33 97.0 34 ................................G TTAAGAGGTGTTTCGATGGTGGTGATTGACATGC 634793 33 100.0 33 ................................. GCGCGTTGCTGGCATGGGTGCCCGATGAGGATC 634859 33 97.0 34 ................................G AGTACATGATCTTGATGTTTTGCCGCTCGCACTC 634926 33 97.0 34 ................................G CGCCGCCACGCTCGCCATTGCGCCCACACCTCGG 634993 33 100.0 34 ................................. AGGCCTGGGGCGGGGCCTCAAAATTAGAGAGCGA 635060 33 97.0 34 ................................T GCCCTTATGGTGTCGGTTCGCGGGAAGTGTATTC 635127 33 97.0 34 ................................T GGGACAAGACCAACTGGCAGAGCCTGTGCGATGA 635194 33 97.0 34 ................................A GGCGAATCAATTAATTCCCTCGGTTTAAAATATC 635261 33 97.0 34 ................................A GTAGTGGATCGCGGCAGGGCCATTCCCCGGGCCT 635328 33 97.0 34 ................................T GGGATAAGGACAACTGGCAGAGTCTGTGCGATGA 635395 33 100.0 35 ................................. TGCTTGTCGTTGCTATCTATATCAATGGCTGGCTC 635463 33 97.0 33 ................................A AACTAATCAATGAATGTCGCCCGCGCTGCCAGG 635529 33 97.0 34 ................................A GTCAACCCGCAAGGTGATCTGTTTGGCAACTCCG 635596 33 100.0 33 ................................. GACAATCAATAACATCACGGGATTAGTTAGAAG 635662 33 97.0 32 ................................G TGACAATTGGGAGTTGTTCGATACTCTCGGAA 635727 33 97.0 33 ................................T TCATACAAACAGCAAGGATTTTACTTTGTATTT 635793 33 100.0 35 ................................. TTCACTGAGCATGGTATGATTATTGGCCTTGCTTC 635861 33 100.0 34 ................................. TGAGTTGAACGCCAGTCCCAATGTCTCGCAAAAA 635928 33 100.0 35 ................................. GGCCAATATCAAGTGCTGGAACCCCAACCAAGCGA 635996 33 97.0 34 ................................T GGAAATCATGGGCCTGCCTCCGTTTACACATGAA 636063 33 97.0 37 ................................G TCGGTACGGCTTACAAGCACCGGCACGTTGGCAACAG 636133 33 100.0 34 ................................. GGTGTCGATGTCTGGGGCGATGCGAACTACAGCA 636200 33 97.0 33 ................................T GCCCGCCGTGGCCCAAACCGATCAACCCAGAAG 636266 33 97.0 33 ................................G TGTGACCGTCATCAGCATGTCCAGAATTGGTGT 636332 33 97.0 35 ................................T CGACATCATGGGCCTCCCTCCGTTCACACATGAAC 636400 33 97.0 33 ................................A CCATATCTGCGATGGCCTCAACATGCTTCGACC 636466 33 97.0 36 ................................A ATCAGAGGCGGGGTGACTTCGATGGTGGTGCCGGTG 636535 33 97.0 32 ................................G TCGTCATCACGCAGTTTCCGCACCTGGTGCAT 636600 33 97.0 32 ................................G TGTCGCCCCATACATCAATGCCTTGACGCCAA 636665 33 97.0 34 ................................T TGTTGCTCCTGGTCGTGGTGCCGATGATGGGCTA 636732 33 97.0 33 ................................A CACATGAACGGGACATCCCGTCGAGCGGCGATT 636798 33 97.0 34 ................................G TGAGATACGGGACAACAAACGGGTTGCGCAGGAC 636865 33 97.0 34 ................................A CGGAACACTACCCACCCAAGTAAACCAATGAGAG 636932 33 97.0 34 ................................T GCCTCAACAGGCCCGGATGTTTTGAACTGCGAAT 636999 33 97.0 33 ................................T CAATAATTTCACCTGTACTGGAATCAATCAAAT 637065 33 100.0 34 ................................. TGTGATGAGGGAGAGCATGCCTTGCCAGATCAAT 637132 33 100.0 32 ................................. TGCATGGCCGCTTGGACATGGCCGACTTGCCG 637197 33 97.0 34 ................................A TGAATCATGCCATTGCCGAAGATGTCTTAATGAC 637264 33 97.0 33 ................................T TGCAGTGAGCGTAATTCTTGACCGGCGGCTTCA 637330 33 97.0 32 ................................A CCCATAAAACGGGGCCAGTTGTCCCATACTAA 637395 33 97.0 34 ................................T GGATTTGAGAATCATTCATTTGAGCGACATAAGG 637462 33 97.0 33 ................................G GTTTTCATCCCTTACAGCTACCGCGACCAGGCT 637528 33 100.0 34 ................................. AGTACTACCACCAGAACAGAAACGCCGGCGACAG 637595 33 97.0 34 ................................A CGCCGATGGAAACCAATGGCGTCGACCGTGACCT 637662 33 97.0 33 ................................A GACTCAGGAACAGACAATTTGTCAAGAAGTAAT 637728 33 97.0 34 ................................G CAGACTCTCGCCATTGGCTATCCGTACGCAGATG 637795 33 100.0 33 ................................. GCACAATCAGATCAGGAGCTACATTCCCCACTG 637861 33 97.0 33 ................................A AATCAGCAACTTGACGTTGATGAGCAGTATTGG 637927 33 100.0 33 ................................. CTTGCTGCGGCAGCAGCCGAACAAACGCCGCCT 637993 33 97.0 33 ................................G AGCCGACCAGCTTGAGGAAACCACCCGGAAACT 638059 33 97.0 33 ................................T CATAGCTGAGGGCTATCAGATCGCCAGTATAGA 638125 33 97.0 33 ................................T CTGGATGGCCTCGAATCCGTTGTAATCAGTCTC 638191 33 100.0 33 ................................. AGGCTGGATCCCGGATATTACTCGCCAACAACA 638257 33 97.0 34 ................................G TGAACAGGTCACGACTTTAAATCTTAATCGTTTT 638324 33 100.0 33 ................................. GCCCGGGCGCACCTCCCAAGGTCGCGCGAGCAC 638390 33 100.0 33 ................................. ACCGCGATGATGAGCGTTTCCTGCGCTGGTTGC 638456 33 97.0 35 ................................T TTTGTGTAGGCAAGATTCTAGTATCGTGCTTGCTG 638524 33 100.0 33 ................................. GCACAGGGGAGATGATGAGCGGCGTTACGGGCT 638590 33 97.0 34 ................................G CCATCCGCGGCACGGGCAATGTCGACAATATTGA 638657 33 100.0 33 ................................. CAGTCAATGTTCGACCACGGGTCAAATACCCAG 638723 33 97.0 0 ................................G | ========== ====== ====== ====== ================================= ====================================== ================== 93 33 97.9 34 GTCGCACCCTGCGCGGGTGCGTGAATTGAAACC # Left flank : TATACTCCATATCTGATTAAGTGAGTGCGCTATGTTGATTCTGATTACTTACGATGTGAGTGTATTGACGAAATCTGGCCAGCGTCGATTAAGAGCTATAGCAAGAACATGTCTGGATTATGGAATGCGAGTACAGAACTCGGTATTTGAGTGTGAAGTAACTCCAGATCAATATGTACGCCTGAAAAACGAATTGCTGAATATCTATGACCCTCATCAAGATAGTTTGCGATTCTATATGTTAGGCAGTAAAGGTCGACAAAAAATAGAGCACTGGGGTGCCAAAGTTATACCCGACCCTATCAAAGATGCTTTGATCATCTGATCCGCTAATCTCCTGTTCTCATCAAATCCCTAAGGGGTTATCGCTTTTTAACAATTTGAATTGATAAGCATAGTAAGTAAATGGCGCATAGTTTTGGTAAACTTGCGCTATTCCGTAAGTAGTTAGCGGGATGAAGGTTCGCAACCCAGACCCCATGCAGACTTACAGCAATACG # Right flank : GGTTGCCTGGCTGAATGGATAGAAAGGGGACATTGTCGCACCCTGCGAGTGAGTGGCTGGTGAGCATGCCTACGAGTCAAAGCGCTTCAATTAAAAAGAAAATATTGTCTATTGATTGACAAATAAATTGCCTACTACACAATCACCTTGTTGGCTTGAGATGCTACAGTAAGCGCTTACAGGGAGAGTGCTTTGTATTATTGTCCTAGAAATGGGCTTTTAATAAGCAATCAAGTTTCTAATTCAACATGACTGGCATGGAGAGGAATGGAAGAGCTCATGCTATTCGCGTTGATATCTAAAGATGATAGGCAGAGGTTGGGTGGGTACATTCAAGCAATGGCTGGAGTTTTCTCTCGTTGCATTTGCTGTGTTGTTTTTCGCAATGGCATTCCTTTTTTTGGGCAATGTCGTGATGCTTCAGGGTGATCGCCAGGATTTGCAAAGCTATTCCAACGATTTATTCGCCCGCGCTGTGGCCGTTGCTGCAGAGACTGAAA # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGCGCGGGTGCGTGAATTGAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //