Array 1 169463-172112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAYG010000004.1 Klebsiella pneumoniae strain NMI10000_19 NODE_4_length_352170_cov_28.705411, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 169463 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 169524 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 169585 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 169646 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 169708 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 169769 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 169830 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 169891 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 169952 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 170013 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 170074 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 170135 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 170196 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 170257 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 170318 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 170379 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 170440 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 170501 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 170562 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 170623 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 170684 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 170745 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 170806 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 170867 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 170928 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 170989 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 171050 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 171111 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 171172 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 171233 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 171294 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 171355 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 171416 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 171477 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 171538 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 171599 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 171660 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 171721 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 171782 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 171843 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 171904 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 171965 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 172026 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 172084 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //