Array 1 246519-246083 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHM010000001.1 Enterocloster bolteae strain SL.3.12 GJEPCEFF_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 246518 33 100.0 36 ................................. TATTGGGTCCATGACCGAAAATAAATCCCCGCACAC 246449 33 100.0 34 ................................. CCCTGGCGGACAACGTAAGAAGTACAACCGGTAC 246382 33 100.0 34 ................................. AAAAGCGCTTTGGGATAACACGGACCAGCTGGCA 246315 33 100.0 34 ................................. AGACGAGGACAAGACCACGCTGGCGGCCTGGATT 246248 33 100.0 34 ................................. GTAAGAATCCGTCCTACGGCTACGGCAGTCCAAT 246181 33 93.9 34 ........................A.C...... GGTTGTTGCCATAGGTTTCCACAATCTGGTGCAT 246114 32 75.8 0 ..........T....A....A.CAA...-...C | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 95.7 34 GTCAGCTTCTGCGAAGAAGCTGTGGATTGAAAT # Left flank : GGCAGGTTATTTTGAGGAGGAGGCGTGTAAGTATTACGAAATACTTCAAGAATTTTTGAGAGTATATGAAAATAAAGATTAAAATTGTTATCCCTTACTTGACTCACTCGTGAGCGGTAGTCCAATTATACAAGATGGGAAGCTGGCCGGGGTGGTGACACATGTGTTTGTACAGGATGCAAGCCGGGGGGATGGGATTTTGATTGAGAATATGTTGGAGTATTGAGGGTGAAGGAATAAGCACAAAATGGCTGTGATTCAACCAAAATCAAAACTAGAGTAGATGAGGAAAGGCTTTCGGAAGATTACGAATTATCCTTCATCATATAAGTGCGAATGCCAAGTGAACAGGAAAACTTGGGGGGATTCGTACCCCTTTTAAGGGACTTTGAGTAAAAAAAATCAAAGGAGATGCAAGCAAATGTAGAATTATGAGATAAAATTGTACAATATGTATACAATGTGACTGATGTGAAATGGAAAGATTGGATATGTTTGCT # Right flank : ACCAGAACCGCAACCATGACACGCCCATGCATGCCACCTCCTTCAAAGAATCCATAGAACAAAGCAATCATTTCCCATATCATCCGATAATGATTGGCTCGTACGAGGCATCTGCTGATGCCTCCCATACCAATCAAATGACCATGAGCATGTCGTCATACATCGCTCCGCACTCTTTCCCATGTCATTCTTCCGCCCTCAATCACTCCCCCTCGTCAAAATTCGACAAATCCCGTCGCTCCCCCTCCCGAAAATCTGCCAAAGTTTTAAATATCAGGAGGAAAAACAGTGATGTTTGCGTTCTATAATCGTGCCTGTGAGAATATAATGAAATGAAACATCAACGTGCTGAAATTACAAAAATGGTGTCGAATTAAAGTAAAATAAAGTAAAAAAACCAATTATTTGTTACAGAAATGTTAATCGTCACAATTAATAATTGCAAAATGACACCAAAAATGATACAATTTAATCTCGACGCGTGTCTAAAATTGCGACCA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCTTCTGCGAAGAAGCTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 489556-489254 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHM010000001.1 Enterocloster bolteae strain SL.3.12 GJEPCEFF_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 489555 33 100.0 33 ................................. CATCATAATTGCTTGTATCTGCAATAGCTCCAA 489489 33 100.0 34 ................................. TTCGCGTATGATGGAAAAGCGATGACTGAGTTGG 489422 33 97.0 36 ...............A................. CGCATCGCTATTACAGAGTGTGGCCGGGGACACGGC 489353 33 97.0 34 ...............A................. TTCTTCGGTCTGTACCTCCTCCAGCCGTTGGAGC 489286 33 78.8 0 ............A.......C.CAAA.C..... | ========== ====== ====== ====== ================================= ==================================== ================== 5 33 94.6 34 GTCGAGGCCCGCGAGGGCCTTGTGGGTTGAAAT # Left flank : GTCCTGGAGTTTCCGGATGAATGTGGATTTCTGGCAGTGGCCGGAACCGCAGTGGCCCTGAAGGCAGGAAAGCCGGCAGCCGTAATGGAACGCCAGGGCAGGGTGCTCCGCGTTTATAATACTAATGATATGGAGGAAGTGATAACAGAATTTGTCCGCGCATTTAAGCAGGGAGCCATATATCCGGAGCAAAAGAGGATTGTTTTGAAAGAGTATCCGGATGAGGCAGCTGATGTATTGCAGACTGCAGGATATATGCGTGAAATGAAGGATTATGTGCTGTATAAATAGTGTATAGCTTTACGGGATTAAAGTCCTTTTAGGCAGGTGCGAATGCCAGGCGGACATGAAATGTCCGGGAGATTCGCACCGGAAAGTCCGGGGAGATGGATGGATGTGTGGGCTGTGGCAGAAGGAGCGAAGGGCGGAATTAAGGAGGAAAAGTGAAAAATACACAAAATGATGGGGGGAATGCGGAGGGAATGTTAGGCAGATTTGCT # Right flank : AAGAAGGGCAGTAGATTTATGATTTTTTGTAATAAGCCAATTCCCATCAGAACCTTACCACCACGCAAAGGAATACAGCTTCCCCAACATTACCCCCATCCCTGCCTGACGCCATCCTCCGCGGTTATTCCTCTGTCATTTATTTAGCCATAGCAGCTTTATCCGCACGCCCCATCCATTCATAATACTTACACCATTCATCTAATGAATGCAGGGGAATTGAGACATTATTTACCATGGCCGACGATGTAATTGTATCAGGGTCCAGAGAACAGTCGTGGTCAATTCCGTCATGAACGATAACAAATCCAGCCATTATGTCAATATCCACGCCATCTATCGTATATTCAAGGAAGTGCCTTGTTTTATACCGCGCATTTGGATTTTTTGGAGACAGGGCGCCGAATTGCTGCATAAGTTCTTTTACACGGGGGACGTCTTTTTCTGATATCAGAAGGTCGATATCATGAAAATCATCTGTTTTTCCATTGAGATACAGC # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGGTTGAAAT # Alternate repeat : GTCGAGGCCCGCGAGAGCCTTGTGGGTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 146860-149641 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHM010000004.1 Enterocloster bolteae strain SL.3.12 GJEPCEFF_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 146860 33 100.0 33 ................................. GCGCTAATGCCAGTTTTTGTTCCAGCTTGAATA 146926 33 100.0 34 ................................. TTGATAAAAAAGCGTGATTTGGCACGAGGAACCA 146993 33 100.0 36 ................................. CAGAAGTTTGAAGGGTTATCCGAGGAAGATGCAAAG 147062 33 100.0 33 ................................. ATCATCCACGCTTTCCACCTCCAGCCGTTTTCT 147128 33 100.0 33 ................................. TAAATCATTTATTGCCATGCGCTCCTCCTATAT 147194 33 100.0 34 ................................. TGGTATCACATGACTGTGTAGCCAGATTGTAGTT 147261 33 100.0 33 ................................. TCCTAACGTAGGAACATTTTGTATTACTGTACT 147327 33 100.0 33 ................................. TGGAGCGCGGGAACATATATAGGCAATCATCTT 147393 33 100.0 36 ................................. TTATCTGTATCTATCTTGCGCTTTGCCAGTTCCACC 147462 33 100.0 34 ................................. CCTTATTGAACGAAGAGTACGCGGGTTAGACTGT 147529 33 100.0 33 ................................. TGTGTAGTTAATCAGGCCAATGTCCCTCATATC 147595 33 100.0 34 ................................. CCAGTTGTTATCTGTATCAGCTTATCAAATGGTG 147662 33 100.0 33 ................................. GCCTCCACCTTGAAATCGTAACTAGAATAAGTT 147728 33 100.0 33 ................................. GCTCACAGTTCCAGGCCATGTTGTGGTTTTGAT 147794 33 100.0 33 ................................. CCTCTTAATGTTGATAATATCAAGATTAAACGC 147860 33 100.0 35 ................................. GATACGCTGTTATCAGCAAATGGGGTAGATACATC 147928 33 100.0 35 ................................. CAGGTTTATATGATATTAAACCTGGCACTGAAATT 147996 33 100.0 33 ................................. TCCAATCAACCTTGCGTCAGCTTCATTGTCTGC 148062 33 100.0 34 ................................. AAATGGACACCAGTCCGTTGCACAAAGGACTGGG 148129 33 100.0 34 ................................. GTTGGTCCGTGTGATATCGCACGGAGCTGGGAAC 148196 33 100.0 34 ................................. CGTAAAAGAACGAATCCTGTCCTGTCTGGCCGTG 148263 33 100.0 32 ................................. AAGATGGGAAGATGAAATGGCATGTTTATATC 148328 33 100.0 35 ................................. GTCACCCTCCATCCCGCATTGAGCCGTTTTCCATC 148396 33 100.0 36 ................................. TTGACCCACCTGTCAAACGTCACGGATGCCTTATTG 148465 33 100.0 33 ................................. TGGTGTTTGCATTAGTTTGCATTTCAGTGCAAT 148531 33 100.0 35 ................................. ATAAATTGCACTGTTTACCACGCTACACCTGCTTT 148599 33 100.0 34 ................................. AAAGCATCTGCACTAGATGTTAGTATGCAAATAC 148666 33 100.0 34 ................................. AGCGATAAGAAGGGGAGAAAATCCCAGGTCAATG 148733 33 100.0 36 ................................. TCCATGGCAGCCTTTAAGGCGGCGCCTTCCGTGCTA 148802 33 100.0 33 ................................. TCCGTCAAATTTGTGTCTTAGTGACCACGCTCT 148868 33 100.0 35 ................................. GCAGCATTTATCTGACGTCTCAAATGGCGCGTTTA 148936 33 100.0 33 ................................. ATATTTACCAGAAGGAGGGAGAGCCCCCTTATT 149002 33 100.0 34 ................................. AAAGCACTGGCTGTCCGGCCTTCTCAAATGCTCC 149069 33 100.0 33 ................................. GTTGGTAAATTATCTAGTGCGGTTGCACGAATA 149135 33 100.0 33 ................................. CAATAAGGGATGATGCACTGTTTCCCTACGAAC 149201 33 100.0 37 ................................. TACCTCCGGCAGACCGGCCACTGATGTTCCCAATGAC 149271 33 100.0 33 ................................. CTCCGTTTGATTTTAAAATGGGCGGGGTTTCCG 149337 33 100.0 35 ................................. TGGTTCATGTAATCATCATAGGCAGGACCATTGGC 149405 33 100.0 35 ................................. TTCGGTTGCGCTTCCTGCACCATAGCTTTTGCATC 149473 33 100.0 36 ................................. CTGCTTGGTTGTCTCCCCATGCTAGCTGGTTTAGGC 149542 33 100.0 34 ................................. GTCCATACGCAGATAGGACTGGATGTAGCCACAT 149609 33 87.9 0 .........C...........A..T....C... | ========== ====== ====== ====== ================================= ===================================== ================== 42 33 99.7 34 GTCTCCGCCTTCGCGGGTGGAGTGGATTGAAAT # Left flank : GCTGGTATTAATTACATATGATGTGAACACGGAAACCGCTGCAGGCAAGGCCAGACTGAGAAAGGTTGCAAAGCAGTGCGTCAATTATGGTACCCGCGTTCAGAATTCCGTATTTGAATGTATTCTGGATAATGCCCAGCTGATAAAGCTAAAGGCAATTCTGACAGATATCATTGATGAACAGACGGACAGCCTTAGATTTTATAACTTAGGGAATAAACATAATACAAAGGTGGACCATGTTGGTGTTAGTAAGGGAATTAATGTGGAGGAACCATTGATTTTCTGATATGATGTGCAGGAGTTGAAACGGTAATAGGTGTTCCGGTGCGAACCTGAAGCAAACATGGATTTCCAGGGGGATTCGCACCAGAAAAATTGTATAATGAGGATGGCATTGTGAGGATTTAGGCATGTTTTCCGGGATTTGGAGGGGGTGTTGTATGACCTGTTTGTTGGAATTTAATAAGAAATGATAGGAGTTGTTGTGTATTATTGCT # Right flank : TAGAACAGTACATAGCTGACCTTGCAGCATAGCGGAATAGAATTAATATATAAAAGAATAGTTATTTTAACTGTATTTTGTATACAGTGCACAGCGGATACTTCCGACTATAAATGCATAACAATAAGGTGGGGCAAGCCCCACCTCTGTTAATCTATAAAATGCTGCAAAAGAGTGCTGACAAAAACCCATATTTCAGCTGCCCCCCATTAGCCCTTCCACGCCCGAATTTCCCTAAGTCCAGGTACCAGCACTTTGGCGCTGGTTTCCAATATAATCCGTCCCTTTTCCGCAGTGGCGCCGGACGGATCTCCGCCGATTCCAATGGGTTTGCCGTCCGCTGTCTTCCAGTCCTCGGATACCCATCCAATGGATACATTCCCGTAAGGCTTCAGCGCTTGATTATCCTTAAATGCATGCGGGATGCCTGCTTCTGAAGTCTCCAGTTTTACCAGAGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCGCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCCTTCGCGGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //