Array 1 225893-228370 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMLG01000006.1 Flavobacterium rhamnosiphilum strain LB3P52 NODE_6_length_260719, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 225893 46 95.7 30 ...C......T................................... ACGGTTAACATCAACCGCATCGCTAACATA A,A,AAA [225902,225906,225908] 225974 46 100.0 29 .............................................. CAATATAATTTCAGCTTTTGGGTGAATTT 226049 46 100.0 29 .............................................. GATTTTGAGTATGGCTAAAGGCGATTTAT 226124 46 100.0 30 .............................................. GACAGCAGTGTAACACCTAACGCGATAAGT 226200 46 100.0 30 .............................................. GTTTACGAAATAAACATCACTTATTCTGGC 226276 46 100.0 30 .............................................. CGGAAATATGTTTTGGACTGTCCTTTTCCT 226352 46 100.0 30 .............................................. GGGGACAGTTGGAGCCGATGGAAAGAATAG 226428 46 100.0 30 .............................................. AAGAAAAGCCAAACAAGCAGCTACAGATGC 226504 46 100.0 30 .............................................. CGCACCATTTCTTGCAGTGATGGACAACAT 226580 46 100.0 30 .............................................. TGGAAAACGATGCAAGCGTACCGTTAAGTT 226656 46 100.0 30 .............................................. CTTACCAATGCTATTTTCGATGCAAAAATT 226732 46 100.0 29 .............................................. AAATTATCTGGAGCAAGAACCATCAAAGC 226807 46 100.0 30 .............................................. TTTGAGTTGGTTAAAAAGCTACTGGGAAGT 226883 46 100.0 30 .............................................. AATCTAAGAACGAAAGCTAATCCAGCAACT 226959 46 100.0 30 .............................................. ACACTTGATATTAATGCTACCATTCAACAT 227035 46 100.0 30 .............................................. GATTGGCTCGATGGGTTCTACATTCAAATA 227111 46 100.0 30 .............................................. ACACTTGATATTAATGCTACCATTCAACAT 227187 46 100.0 30 .............................................. GTAACAAAATATGTTCTATTTATAATCAGT 227263 46 100.0 30 .............................................. AAAAGAATAATATACAATAACACTTTAACT 227339 46 100.0 30 .............................................. TTTTATTTCTTTTGCCGAATACCAGTTACT 227415 46 100.0 30 .............................................. AATGAACCACATCACCCAACGGAACCAATT 227491 46 100.0 30 .............................................. CGGAGTGGTTAACCGGTGATTGAGCAGTTT 227567 46 100.0 30 .............................................. ACAAAAAAAAATATTCCTTATGGAATGGTT 227643 46 100.0 29 .............................................. TCTTATTATATTTAAAGGCATAAACCAAT 227718 46 100.0 30 .............................................. TTTTATTTCTTTTGCCGAATACCAGTTACT 227794 46 100.0 30 .............................................. AATGAACCACATCACCCAACGGAACCAATT 227870 46 100.0 30 .............................................. CGGAGTGGTTAACCGGTGATTGAGCAGTTT 227946 46 100.0 30 .............................................. ACAAAAAAAAATATTCCTTATGGAATGGTT 228022 46 100.0 29 .............................................. AATCATTTCGAATCATAACGCAGCGGGCA 228097 46 100.0 30 .............................................. GGATCATTATAAGCGTATGATTGTCGACAT 228173 46 100.0 30 .............................................. TTGCGCTCAAATATTAATTGATGCGGGGAT 228249 46 100.0 30 .............................................. ACTACATCCTGAATTGCGCAAAGATCCATT 228325 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 33 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Left flank : TAGTTTCCGCTACAGTTTCCGTTTCCAAAACTTCTGGTTCTAATGGAGTAGATTCAACAGAATTGTGTTCTAAATTTCCATCTGCTTCAAGCAGGTTATCATTCTTTTCTTCTAACATTTTTTCAATGTGTAAGGTTTCTATTTTTTTATCGAACACGAAAGATAGTAAAGGAGCATGAAATTTCAAAATAAATCCTTTATTTATAGTCGTTTTAGGTTAGGTAACAGTTTTTTTTGAAGCAATTTCCTGCTGTTAGCTATATCTTTTTTGTTCGCCAAAAAGGCGAACAAAAAAGGATGCAGCTGCCATCAGGGCTAGGGTTTTTGGGGATGTAATTGTGAGTTTTTATTGATGAGAATGTTTTTTTGTATTTATGGAAGAGGAAAGAATTTTAGTCATTACATTTTTAGGCTAAATAACACAAGCTTAAAAAAAAAACAAAAGGCTACAAACGTTGGTATGAATAACTTTGCCTTACTGTTTTTTAATTTTTAGAAGC # Right flank : CATACCTCGATTTAATCGATTGATATGTTGGTAGTTATGAGTTTATTTTGAAATCGAAAAGAAGTGATGTTTGCGTGTTGTTGTACAGGGAGTTATACTTTTTTCTCATCCTATGAGACTAAAATAATTCCAGTTGTTGTGAAGGTTTGTCTGTTTCTACGAGTTTTTTTCCATAAAAAAGTTCCATCATCCCAAATTGTTTATCGGTTATTTGCATGACGCCAATTTTGCCGTGTTCGGGTAAGTTGTTCTTTATTCTTTTGGTGTGTACTTCAGCATTTTCCCTGCTGGCACAAAATCGCATATAGATGGAGAATTGAAACATAGAAAATCCATCGTCTAATAATTTCTTTCTGAAAGAAGAAGCTATTTTACGTTCCTTTCGGGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATATTGGTTTAAACGGGTGTAATGTTCGTCATACATAAACGGGGTATAAAATTTTTCTGGATTTTCCCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //