Array 1 43012-44778 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR700081.1 Faecalibacterium prausnitzii strain P9225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================================================ ================== 43012 28 100.0 33 ............................ CTCCCAAGCCTGCCCTTTCAGACCCTGTGTGCC 43073 28 100.0 33 ............................ CCACATCGAGCAAAACGCCGCTATGGCCTACAA 43134 28 89.3 33 ............A.C..A.......... TTTGCAGCCCGCAGGTGCAGCGGAATTTCACGG 43195 28 96.4 33 ..............C............. GAAGTTGCCCACACCCATGGACGGTTCCAGAAT 43256 28 92.9 33 ..........T...C............. TGCGGCAATGTCGGTTTTGGTGAAACCTGCATT 43317 28 96.4 34 ..............C............. CATTGAGGCCCCCGGCACACCGATGGCCGGGATG 43379 28 96.4 33 ..............C............. CGAAGAAACGGCCTTGCAGCTGCTGCGGGCCGG 43440 28 96.4 33 ..............C............. CATTCGTTTGTCAGTGCGTACCGGCATTCTCTG 43501 28 100.0 33 ............................ CATTTTCCTTAACCTTTTTGTTCGCTTTCATAA 43562 28 100.0 33 ............................ CATGGGCAGCCATACGCCCTCCAGCTCCTTGTT 43623 28 85.7 33 ...........ATGC............. GTAGGGCAGGACGGCGTACACAGTGCCAGTTTG 43684 28 85.7 33 ........T...TGC............. CAACAGCTTCACTCAGGCCGCCATCGAGGCCGA 43745 28 100.0 33 ............................ CTTCCGCGGCTATAAGCTGAACCTCATTTCCGT 43806 28 92.9 33 ............T.C............. TACCATGTTGTCCCACACGAAGGGCTGATAAAA 43867 27 82.1 204 .......T.....-.......A.AC... ATGGAATAATGGGTGCAATGCGGGAGCGTTCAAGCTTAACCTGAGGATGCAGAAGCGAATTACAAGAAAGAAGGTAAAACAATGGAACATGAATATGAAGCACTATTCAGAGCGATTTTGGAGCTTATCGACAAATGCGACACGATTGAAGAATTGCGTGAGAGCGTGAAGCGTATCATGGGCGAGGGTTAAGCTGAGATGCAT 44098 28 89.3 33 T...........T.C............. CAACCGCGAGGGGATGCAGAAGAGCCGCACCGA 44159 28 100.0 33 ............................ CTCCCCGGCGACACGCACCCGGAATACGTCGGA 44220 27 82.1 34 ..........-..T.......T.AT... ACTGAAAAATGTTTCGTCAAATCGGAACCGCAAT 44281 27 75.0 32 A....-.....AT.G.....A..A.... GGGCAAGGCGAATTACAAGAATGCTTGCAAAG 44340 27 75.0 199 TC......T.-......A....CA.... CTAAGAAAGAAGGTGAGAACATGGATGAAATGACAACACCGGAAGTGAACAGTTATCTTGAGTTGATTGCAAAGCTGGTTGAAGCAACGGCCAAAACACCAGAAGATGCCGCGAGAATCGTGCGTGAGAGTAAAGTTAAATAATTTCTGCACTAGCAGGGGTAATCCGTCATCTCCGATATCGTCACCGATGTTCGCCA T [44363] 44567 27 89.3 35 G............-G............. CAGGCGAGAGGTGATATCAGCGGGGACAACACCAT 44629 28 96.4 33 ..............C............. GATGTAGCTCATAAAGTCCTCAACGCCCGCCCA 44690 28 100.0 33 ............................ CTGGCAGCTGTGTCACAAGATGATCTTCACCGG 44751 28 85.7 0 ..............C........TC.A. | ========== ====== ====== ====== ============================ ============================================================================================================================================================================================================ ================== 24 28 92.0 48 CTTTTCCCCGCCCATGCGGGGGTGATCC # Left flank : TGTACCTGCTCCTGCTCAGTGAGGAACGGCCGGATCTGACCGCCCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGGGGCACCCTGAAACCCTGCTATCTCGAGGTGGAGCAAGAGGAATGGCTGTGGGCGCAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAGGGGTCGTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGCCTGTTACCCTGCTGGCTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATCATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG # Right flank : CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCTGCCCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGTACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGTATGGTGTACATCTCCCACCCGTCG # Questionable array : NO Score: 3.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-1.39, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.30,-12.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [6-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //