Array 1 65360-66180 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LNHP01000072.1 Klebsiella pneumoniae strain 50627996 contig163, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     65360	    29	  93.1	    32	............TG...............	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
     65421	    29	  93.1	    32	............TG...............	TGGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
     65482	    29	 100.0	    32	.............................	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
     65543	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     65604	    29	  96.6	    32	............................C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
     65665	    29	  93.1	    32	............TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     65726	    29	  96.6	    32	.........................A...	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     65787	    29	  93.1	    32	............TG...............	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
     65848	    29	 100.0	    32	.............................	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
     65909	    29	 100.0	    32	.............................	TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA	
     65970	    29	 100.0	    32	.............................	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
     66031	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     66092	    29	 100.0	    32	.............................	CACTACCAGATCCGAATGGACACCCGTAATGA	
     66153	    28	  93.1	     0	......................-.....A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  96.3	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATC

# Questionable array : NO	 Score: 5.76
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGTGTGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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