Array 1 630-1803 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFHY01000011.1 Escherichia sp. B1147 EC2821_c11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 630 28 100.0 32 ............................ ATTATGCTGCCAGCACCACCGCGTCGGCGGCT 690 28 100.0 32 ............................ CTGTTATCTGCCACTGCGCGTGGCGCGGCCAT 750 28 100.0 32 ............................ AGCACTCGTGTAGCCCAGCAATAACGGCGGAA 810 28 100.0 32 ............................ ACGGCAAATGGCGGCTGTATCGACTCGACGGG 870 28 100.0 32 ............................ TGGACTATCAGCGCCCGGTTGCCGGAGAGTGA 930 28 100.0 32 ............................ AATAAAACACCCTGACAATAACGCCCAAAATA 990 28 100.0 32 ............................ ATCACAAGAAACATGAAGCCGTCTTTGGTGAT 1050 28 100.0 32 ............................ AGCTCCGGTGCGCCCATTTTCTCCAGCTCACT 1110 28 100.0 32 ............................ TGGTGGCGTATGCAGGGCTATGCGCTGGAAAT 1170 28 100.0 33 ............................ AAGAAACGCAGCAGCGTTGACGCCGCGATTAAT 1231 28 100.0 33 ............................ ATAATTTGTTTTTGCACCACTGTACCTCGTTAA 1292 28 100.0 33 ............................ AGCAGCGATGCGAAGCTCTTGAGGCGGATCAAT 1353 28 100.0 33 ............................ AGCAGCGATGCGAAGCTCTTGAGGCGGATCAAT 1414 28 100.0 32 ............................ ATTCCGTAGCAGTGCGCGTAGGCAGTGGTGCT 1474 28 100.0 33 ............................ GAGCCAGAAAGACCTACACAAGTTGCAGCTCGA 1535 28 100.0 32 ............................ GCGTGCCAGTCTTTCTTTTCAAGAGACATTCT 1595 28 100.0 32 ............................ CCCTACCCTCGCATAAACAAATAACCGTCTTA 1655 28 100.0 33 ............................ GCAACAAGGGGGGCGCATGACCGCAAACATTAT 1716 28 100.0 32 ............................ GGATACGTTCATTTCGAAACGGTGAACTGCCT 1776 28 89.3 0 ....................T..TC... | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCATCCCCGCCAGGCTGTGCAACATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTAAAATATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCTGACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATTTAGATTGGTTTGTTTGGTTATGCAATGAACACACGATTTGTTCGACCGAGATTATGACCGTATGCGTTCTGGTCAATTGTTTATCAAAAGCTATGTAGAAAATATGAAATTGAAGAAGTACCGATCGGCCCTTTTTTCAGGGTGAAATGTAACTCATTGATTTTGTTTATTGCTATTTTGAAGTCTGGAAAAAGGGTATGACTCGGCGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : ACTCAACGCTCCATCCTCCAGGATTTACTCCCCATAACTCCAAACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCTATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCCAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGTGCGCTAATTCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACTATAAGCGCAACGTATAAGGGAGCGGTGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 130443-131371 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFHY01000018.1 Escherichia sp. B1147 EC2821_c18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 130443 28 100.0 32 ............................ ATCCTGGCGATTCGGTGTGACAGCCGGGAAGA 130503 28 100.0 32 ............................ TCAGCCATTGCGCGTAGCCTCCGCGATAAAAT 130563 28 100.0 32 ............................ AGGCCCACAGGTCGGAGAGGCTTTTCGTCATG 130623 28 100.0 32 ............................ AGGGGAACATCTCGGAACTGTCGTAGCGATAG 130683 28 100.0 32 ............................ GTCTCGGGGATACTCCGGGGATACCGAGCAGG 130743 28 100.0 32 ............................ AGCAGTGGCAGATTGAATAAAAAGCCCCGAGG 130803 28 100.0 32 ............................ TTCCTGTCGCGAAAAAAGACACGTTGTATTCC 130863 28 100.0 32 ............................ ATCGTGCCGTCGTTACCCGGATCCTGCGAGGG 130923 28 100.0 32 ............................ TCCAGAACGCGTGCTTCATTTCGGCTCATCCA 130983 28 100.0 32 ............................ TCAAGCTCTTTCTCAGTCATCTGGCGTTCTAC 131043 28 96.4 32 ..C......................... GCAGCAATTATAAAAACATGCCTGAGCAACGC 131103 28 96.4 32 ..C......................... TGCTGTCGTTCAATCTCAAACCGGGTGACCAC 131163 28 100.0 32 ............................ AAGCGATTATGAGTCATGCGATAAATAGTTAC 131223 28 100.0 33 ............................ GCCCGAAGGCATCGTCTCTCAGGTCATGACGAT 131284 28 100.0 31 ............................ TGGCAGGGCGTGCCGCCCACCAGCACGTCTG 131343 28 89.3 0 .G......................C..T | C [131366] ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAGTTTATTGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCGATGGGTGCACGTCCAATGGCACGTGTGATTCAGGACAACCTGAAAAAACCGCTCGCTAACGAATTGCTGTTTGGTTCGCTGGTGGATGGTGGCCAGGTGACTGTCGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCATAAACCGGAAGCCGCGCATTAATCAGCTTGTTAGGTAGGTTGATGAAGTCCGTAATCTCGTCAGGGGTTACGGACTTTTTGTTTATGGGGGGCGAAGGTCCAGACCCTTTTTTTGATGATGATGGTAAGTTATTGATAATTAATGCAGCTGGAAGGTAAGGATAAAAAAGGGTGGCACCAGGAAAATTAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : TACGATAATGGTAGACGTTTGGTCGTGTTATGACGCTCTCAACTTCAAACCATTAGCCCCAGCAAACAATAACAATTGTGATAATTGCGATAAAAATCAATTTATCGCACAGAAATCAATGCTGTACTAACCTCGACGTCGTCAAACAAAAATAATCACAGGATGTGTTTATGTCTTCCAAATACCTTACCCCATCTGACCTCAAAGCCATTCTCCACTCTAAGCGAGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGGGTTGAGTATGTTACCAGTGAAGGTAAGGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCATTGATGTTGGGGATGGGAACATCCGTTACTCAGGCGGCGATGCGCGAATTTGCCCATGCCGGGGTGATGGTGGGCTTTTGTGGTACGGATGGTACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //