Array 1 1952142-1952595 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP009343.1 Francisella philomiragia strain O#319-029 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                            	Insertion/Deletion
==========	======	======	======	====================================	===========================================================	==================
   1952142	    36	  80.6	    59	T.......TA......A...GG...........T..	CAAAATGCTAAAAAAATCATAGATTTTAGGTCTTTTTTTGCTGATTTAGGTAAAAACGG	T,G,T [1952144,1952147,1952161]
   1952240	    36	 100.0	    29	....................................	CTCATTTAGAAATTCAATTTTTAAATTCT                              	
   1952305	    36	 100.0	    27	....................................	AACCCTAAAGATTCTAACGGTGTTATT                                	
   1952368	    36	 100.0	    27	....................................	GAAATGGTGGAGTAATGCCAAGCAACG                                	
   1952431	    36	 100.0	    28	....................................	GGACTATTCTTTTAATGTTTGATACATA                               	
   1952495	    36	 100.0	    30	....................................	ACTTGATACTATATGTACGAACATTTAGAA                             	
   1952561	    35	  75.0	     0	......A...A.....-..A....GT.AA.....G.	|                                                          	
==========	======	======	======	====================================	===========================================================	==================
         7	    36	  93.7	    34	GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT	                                                           	       

# Left flank :   GTTGCAAAAATGAGCAGTTTTATATAAAAAAAGATAAAACAAAAGACTACTCAAAAATACTTTTTGCCGAGATTATCAGCTATAAGCTAGAGATATTTGAATATGTAAGAGAATTTTATCGTGCCTTTATGCGAGACAAAGAAATTGCAGAGTATCCAATATTTTGTTATGAAACTAGGAGGGTGTATGTTGATAGTCAGTTATGATTTTAGTAATAATAAAGTACGTGCAAAGTTTGCCAAATTTCTAGAAAGTTATGGTGTACGTTTACAATATTCGGTATTTGAGCTCAAATATAGCAAGAGAATGTTAGACTTGATTTTAGCTGAGATAGAAAATCACTATGTACCACTATTTACAAATGCTGATAGTGTTTTAATCTTTAATGCTCCAGATAAGGATGTGATAAAATATGGTTATGCGATTCATAGAGAACAAGAGGTTATTTTTATAGACTAAAAATTGCAAACCTTAGTCTTTATGTTAAAATAACCACTAAG
# Right flank :  TTAGAATTATGTTTTTTAATAGTATTTAATAGCTTTCTATACAAATTGTAGCTTCGGGCATGTCTGGGAATGTAATTAGATAGCTACTGTTAATATTTATTTATATTTTGTATATAGCTTTCATTTTTAAAACTCTTATCCAAAATCGTCAATACATCATCATGAAATCTCTCTCTTTTTTGCTGTGTAGATCTACCACAGAACAACTCAGCGAATCTACTAGTTGGCCATTCAGCATCGACATGTACAGCTCCATCAATTTTGATAAGATTGTTTTCTTTTAGATTTGTTATGAAGTTTTTGTAGTTGTTATTGGTATTACATGCGCTTGCTGAGGCAGCTATTATATAGGTTGGGCAATTTATATTCTTGGCAGCTTGAGAGCCAAGATTGCCTACATCTACAGGGTCTAATCCTATCCAAAGCTTGACCCTAGTATTCTCTGATGTCGCTATCAAAGTAGCTAATCCTCCAGCAGAGAAACCAACCAAAGCAAGATC

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTAAGAACTTTAAATAATTTCTACTGTTGTAGAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//