Array 1 3267822-3261022 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062005.1 Halomonas sp. YLGW01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3267821 29 100.0 32 ............................. TACGAAGGCATCGACCCCGAGCGTGCCCGCCA 3267760 29 100.0 32 ............................. TCCTCCATGGTTCCATCGGGGAGCAGCTCCAT 3267699 29 100.0 32 ............................. GCCTCCTCGGGGGTCGAGGGGTACTCGCGCTG 3267638 29 100.0 32 ............................. GTGTCGCCGTTCTTCTCGATCACCAGGCTGGT 3267577 29 100.0 32 ............................. GGCCGCCCGCTCGAGATCGACACCGAGGTGGC 3267516 29 100.0 32 ............................. ATGAGCCACTGCGCGCGCACGCCAAGCTCTTT 3267455 29 100.0 32 ............................. TTACGGCGAGCGATCAGGCAGATGGTCTCGCC 3267394 29 100.0 32 ............................. TTTCGCGGGTCGCGCCCGGTCGCCTTCCACTC 3267333 29 100.0 32 ............................. GCAGCACCAGCGCAGCGAGAGGACAGGCGTCG 3267272 29 96.6 32 ............................C GATCGCAGGGCGGGATAATGCACTCAACCTCC 3267211 29 100.0 32 ............................. AGATCATCGCCTGTGCCGACGATCCCTACAGC 3267150 29 100.0 32 ............................. AGCTGGCTGAACACGACATGCCGGAGGTCTAC 3267089 29 100.0 32 ............................. CACGACCCGGATTGCGAATACCCCGGCCTTGC 3267028 29 100.0 32 ............................. ATCAGCTTGCTGCCGGAGCGCGAGCGAGACGC 3266967 29 100.0 32 ............................. GCGATCCAGGGCGTCTTCTCCAGCGGGTATGT 3266906 29 100.0 32 ............................. GTGCCTGAGGCCCACCGATCGTCAGCCTTCAA 3266845 29 100.0 32 ............................. TAGAGCGTATCCGCCAGGGTGAAGCGGGCGGC 3266784 29 100.0 32 ............................. ACCAATTATGCCGACTGGTTCGGACGGCAGCC 3266723 29 100.0 32 ............................. CTCTCGACGGTCACGCCGGCATAGTCTTTCAG 3266662 29 100.0 32 ............................. CGTTCGACATAGGTCGCGACCAGCGCCTCGCG 3266601 29 100.0 32 ............................. TTGGTCAGCACATCCTCCTCATACATGGCGAC 3266540 29 100.0 32 ............................. CCGTCTTCGCCCTCGACGGTGCCGCTGGTGCT 3266479 29 100.0 32 ............................. GCGATTATCAGCGCCGAGGTCGAGGCGCAGCG 3266418 29 100.0 32 ............................. GTCGCGGTCTTCATGTTGCCCGGCTGCTTTCC 3266357 29 100.0 32 ............................. GAGAGCGCCGAGGCCCAGCTGCAGGCCTATGC 3266296 29 100.0 32 ............................. TTAGAACGTCCATGCCGCCGATGTACTGGCGC 3266235 29 100.0 32 ............................. CTGGCAGGATGTGAGAACGCTTGTCTGGTTAG 3266174 29 100.0 32 ............................. GTGGATGAGACCATCCTCAACAAACTGCCGTA 3266113 29 100.0 32 ............................. TCCTGATCGGTGGTGAGCGTGGTCTTGATGCC 3266052 29 100.0 32 ............................. CGTCTCGTTCTGCTGCTTGATCCGCGACCGAC 3265991 29 100.0 32 ............................. TGCGAGCGGGTGATCAGGATGTCCTCGCCGGC 3265930 29 100.0 32 ............................. TTGTCGTAGTTGATCTGCGCCTCGCGCAGCGT 3265869 29 100.0 32 ............................. GTCGCTGAAATCTTCGAGCATGAGGACGAGCT 3265808 29 100.0 32 ............................. GCCGGGGAAAAGACCTCGATGACCAACGCTCG 3265747 29 100.0 32 ............................. GCGCCAGTGCCGATCAGGACGCAGTGCTTCAA 3265686 29 100.0 32 ............................. CCCACGGTCTCACCTACAGCCTATCCATAGAC 3265625 29 100.0 32 ............................. GGCTTCGATGCCCCGGAGACGTCCTGTCTGGT 3265564 29 100.0 32 ............................. CCTCGACGGCACCGTCCGATACCTTGAGGTGC 3265503 29 100.0 32 ............................. ATCATCCGTGACAAGCGCCAGATCCCGAGCCT 3265442 29 100.0 32 ............................. TCGAGTTGTCGGCGCTGTACTCGATGGCAACC 3265381 29 100.0 32 ............................. GATCAGCCCGCCGCCATCGGAGACGAACGCTA 3265320 29 100.0 32 ............................. GCCGATACCTCTAGCGGCTATGGAAGCACGAC 3265259 29 100.0 31 ............................. ACGTTATCGACATTATCCACATCGGCCTGGC 3265199 29 100.0 32 ............................. GCCTGACGCAGGGCCTTGAGGCCCGCCACCCG 3265138 29 100.0 32 ............................. GAGGAGCGGGCCAGGGTCTCGAAGGCCTTGGC 3265077 29 100.0 32 ............................. CCGAGCTGGCGGGCCTTCAGGATCAGGTCCAG 3265016 29 100.0 32 ............................. ATCGTGGACCTGGCGGCCCGCCGGGAGTTGCG 3264955 29 100.0 32 ............................. GCAAACGTATCGCCGCCGCATTGAACGACATC 3264894 29 100.0 32 ............................. TCGTGCAGGGCCAGCTGGTCGGCGTAGTGCTT 3264833 29 100.0 32 ............................. CAACATGAAACCATTCACCAACCAACATGACA 3264772 29 100.0 32 ............................. GGCGCGCCGTCACGGCTGGCAGAGGCGTAGTG 3264711 29 100.0 32 ............................. ATCTCCAATGCTGAGACGTTGATAATCCACGC 3264650 29 100.0 32 ............................. AGCGGTTCGGGGGCAGGCACTCGCCGCACCCT 3264589 29 100.0 32 ............................. ATGCTGCTCAGCCTGCCCAGCTACTACAACGT 3264528 29 100.0 32 ............................. TTAGGACACACCGAAAGCCACGTCTCAAACAT 3264467 29 100.0 32 ............................. CACGACTGAGGCCCGCGAGCGACAGCGAGTAG 3264406 29 100.0 32 ............................. CGGCCATCGGGTCGGCCATCGCCAGCGTGCTC 3264345 29 100.0 32 ............................. GCGACCGACAATGGCTGGCTGGTGACCACCGC 3264284 29 100.0 32 ............................. GGCGGCACCTATCGCGTGTACCGCAAGTTCTA 3264223 29 100.0 32 ............................. GTACACCCCATGCCGCGTATCAGTCCCAGCCG 3264162 29 100.0 32 ............................. GTAGACGAGACGATCCTCAACAAGCTGCCCTA 3264101 29 100.0 32 ............................. CTGGAATCACGCATCGCTGAGATGGCCGATGT 3264040 29 100.0 32 ............................. GAGTGGTCGACCCGGTGATGGAGTTTCGTGGT 3263979 29 100.0 32 ............................. TCGAGCGCAGGCACGGCCCCCATCTCGGATTC 3263918 29 100.0 32 ............................. ATCTTCGAGTAGGCCAGAGCCTCATCGCGCGG 3263857 29 100.0 32 ............................. CCCGATCACGAAACACCAGAGCCGCATCGTCA 3263796 29 100.0 32 ............................. ACATCCCAGCCGGCGGCGCCGGGGGTGGCGCG 3263735 29 100.0 32 ............................. GAGAAGCCGACCACCACCTACACGATCGTGCC 3263674 29 100.0 32 ............................. AACGAGGCCAGCGCGTCCGCTCAAGAGGCCAC 3263613 29 100.0 32 ............................. GCGTCAGTGATGAAATGATGGGTTACGTCGGC 3263552 29 100.0 32 ............................. CGCTGCCACCGCTTCGACACCCTACGCATCGA 3263491 29 100.0 32 ............................. CCCAGCGCCTGCGTTTTAACGCCGATCGCCTG 3263430 29 100.0 32 ............................. GAGGCCAGGCCAATGCCGAGGACCGAAAAAGC 3263369 29 100.0 32 ............................. GTGGCCAACGGCGCCACCGACGAGGACATCCG 3263308 29 100.0 32 ............................. GCGCCTTGCGCGACTACATCCGCAACATCGAC 3263247 29 100.0 32 ............................. CAGTGACTAGACGCCACGGGCCGCCGTGGCGT 3263186 29 100.0 32 ............................. GAGGCGAGGGCAGCCTCGCGGGTCGGTGGCAG 3263125 29 100.0 32 ............................. CATCAGGCATGGCGTTGCAAGAGATAATCGAT 3263064 29 100.0 32 ............................. CCGGAGGCTGGCACCAGGGCGCGGACTAGCTG 3263003 29 100.0 32 ............................. ATGATTAGAATCGGCCCAAATTTGGACCCATC 3262942 29 100.0 32 ............................. GACCAGAACGGCATCGTCTACCAGCGCTGGCA 3262881 29 100.0 32 ............................. TTTTTCATCGTTTCGGCTTCCTGCGTTCGATT 3262820 29 100.0 32 ............................. TCTAGAAAACTCACCAAAGAAGAAAAAATTTT 3262759 29 100.0 32 ............................. CGCCACTGATCCCACCACGCAACGCGCAACGG 3262698 29 100.0 32 ............................. AACCCGACCGCACCGGTCGAAATCATGGGGTC 3262637 29 96.6 33 ............................A GTAGAGGTCGGTGATAGCGCATTCGCTGGCGCA 3262575 29 100.0 32 ............................. TTGGCGACCCGCTGCAAATGGCCATGTCTGAT 3262514 29 100.0 32 ............................. TCCTTAAGCTCGCCGCCGCCAGTTGACATAAA 3262453 29 100.0 32 ............................. AGATCTACGAATGAGCGAGACCACCGCCGCGA 3262392 29 100.0 32 ............................. CGCAATATCCTGCTGCGCACCTTCCGTCCGCA 3262331 29 100.0 32 ............................. ACGCCTCCAGGGCTGCGTCCAGAGCGACCAAA 3262270 29 96.6 32 ................A............ TTTGCCCCCTACTTCCGGCCGGTCAAGGATGC 3262209 29 100.0 32 ............................. GTCTGACGCACATCGGCGACCGTAGGCAGGTC 3262148 29 100.0 32 ............................. CACTGCGAGTAAACTCTGTGCAGTCAGCGAAG 3262087 29 100.0 32 ............................. CCGGCAAGCTGCGTCGCAACAACATCGCCGAC 3262026 29 100.0 32 ............................. ATGGTGATCTCCTCGATGCCCTCGGGGGGCTC 3261965 29 100.0 32 ............................. GTTTCGCTGGATACCGTGCCCTCGGCCCAGTC 3261904 29 100.0 32 ............................. TGAGCCTTCTTGCCCGACTGCTCGACGATATC 3261843 29 100.0 32 ............................. TTCGTCGACTGGATCCGCAACGATGACCGCCG 3261782 29 100.0 32 ............................. CCGCTGGGGCGTCTACGCTGACGACTGCAAGA 3261721 29 100.0 32 ............................. CCGCTGGGGCGTCTACGCTGACGACTGCAAGA 3261660 29 100.0 32 ............................. CTTAGTCATCGAACTCGAATCCGCATTTCGGA 3261599 29 100.0 32 ............................. GTCATTGCACGACTCACGGTGGCTGTCATGGA 3261538 29 100.0 32 ............................. TGAAAGGCTTCTGGCGCGACGACGCCAGGGCC 3261477 29 100.0 32 ............................. GTGGTGGCCCCGGCGGCTAGTTCGGCGCCGAG 3261416 29 100.0 32 ............................. GTGGTGGCCCCGGCGGCTAGTTCGGCGCCGAG 3261355 29 100.0 32 ............................. ATCGGCCCGAGTTGCGAGCGCACTCCGCTATC 3261294 29 100.0 32 ............................. CGTCCAGAGGAGATTGCCACATGACACCCGCC 3261233 29 100.0 32 ............................. ATCACCGGGGCACTGAATCCCCTGGGCATGAT 3261172 29 100.0 32 ............................. CCAGCGACCGACGAGGACGGCAAAGCCAAGGT 3261111 29 100.0 32 ............................. GCCTCGGCCCAGGCCCGCATGTGGGCCAGCTC 3261050 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 112 29 99.9 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : GCGATATCGAGCCACCGCCGCCAGCCCCGGAGGCCATGCTGCCTGCCATTCCCGAGCCCGCCTCCGTGGGCGACCAGGGGCACCGGAGCAAATGAGATGGCCATGTTAGTTGTAGTGACCGAGGCCGTGCCGCCGCGTTTGCGCGGTAGGCTCGCTATCTGGCTGCTGGAAATTCGTGCTGGTGTCTACGTCGGCGATGTCAGCCAACGCATTCGCGAAATGATCTGGGAGCAGGTCGATGCGTTGGCCGAAGACGGTAACGTCGCCATGGCCTGGGCCAGTAACCACGAATCAGGCTTTGAATTTCAGACCTACGGTACCAACCGGCGTGAGCCTATCGATCATGACGGGCTGCGCTTGGTGCGCTTTTTACCCCAAGAAGCCAACTAATTGATTTTATCGGATCTTTAACAAATTGCATTGATCGAATAATGAGCAAAATCGCTGGTGGACTTTCCGCCAGCGATTTTGTTCTTTTTAAACAATCGTCTACGATTAGT # Right flank : TCCTTAAGCACCCAGTAAGTCCTAGCATTATCGGTTACCAACATTTGGCGCTCACTCCGGCACGGCGTAGAACAGGCAGTCGCTGCGGGCGATCTCGGCGTTGGTGGTGGCCATGAACAGGCGCAGTGGGCGGCGGGGGTAGAGCCTGCCGTTTCGCGCGCAGAGCAGCTCCCCCAGACGGTCGCTGCCTCGGGCGTCGACGGCCTGCAGGTAGCGAAGGCCCCCCTCACCGAGCCAGCCGAGGCAGGTGGTCGGGTCGGTGATACCGCGGTTGCAGGTGTCGATGCGGGCCCAGAGGGTGATATCGGCGCCGGGCTCCGGGCCGCGGGCATAGGCGAGGCTAGCACCGGGGCGCAGTTCGACCCGCAGCGGATGGATCAGCACCTCGAGGCCGGGGGCGGGGGTGAGGGCCGCGAGGTCCGGCCAGTCACCGAGCCGACGATAGACGTCGGCCGCCACCTCGAGGGCGGCCGGGTCCCGGGCGCCACCGCATTCGAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //