Array 1 278-434 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE346914.1 Gardnerella vaginalis JCP8151B Scaffold194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 278 26 96.2 40 ..T....................... CACGGCGTGTCGTCATACAATCGCACTACATAAACACGTA 344 26 96.2 39 .....................G.... TCGGTGTTTTTTAATACAAACACACTACATAAACACGCG 409 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ======================================== ================== 3 26 97.5 40 AAACTGTAGTGCGATTGTACCTAATT # Left flank : GAGGCAGCGGAAAAATCGCCAGCCGCCGTAGAAGCAGAAACTTCGCTCGTCATATCTTCATCAATAGAAGCATCGCTAATAGGAGCATCACTAATAGGAGCATAGCTCTGCTCGTCGGTAACATCATTAATAGTTGCATCGCTCTGCTCACTGGCATCTTCTGGATTGCCAAACAAATCAAAATCGTAACCGTACTTGCTCAAAAGCCCCTCGCTCCCGTGTTCCAAATCGCAAAAATTAAACTCTAACCAATTTTAACGGACTGCAGCCAAACACAA # Right flank : TCACGGCGTGTCGTGTCGTTCGCGCGCTACAGCGCGCTATTCCTAACGGCTATTAGTAGCCGTTAGTCTGATTTGGCGCATAAAGTCCACTGGACTTTATGCCTTAAGCAAATCACGCTTTGAAGGAGCTTGAAATGCGTTATGCAATTTCAAGCTCAGTCAAAGCGGGGGGTAAGCTATACAGATACACGCCGAACACGCGGAATGCTGCGCAATTTGAAAGGAATCATCGTGCAAGAACTTGAAGAACGAATCCAAAAAGAAGGCATTGTTAAGCCAGGAAATGTTTTGAAAGTCGACGCATTCCTTAATCACCAGTGCGATTGCGCGCTTTTTGACGCAATGGGAGCCGCTTGGGCGCAGCATTTTCAAAACACGCAAATCAACAAAATCCTAACAATCGAGTCTTCGGGAATCGGAATCGCGTGCGTTGCTGCGCGTCATTTTGGCAACATTCCAGTGGTTTTTGCAAAGAAAGCGCAATCAATCAACTTGGATGG # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACTGTAGTGCGATTGTACCTAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //