Array 1 182016-179488 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSFS010000005.1 Klebsiella pneumoniae strain GCKp24 NODE_5_length_252378_cov_43.855030, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182015 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181954 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181893 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181832 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181770 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181709 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181648 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181587 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181526 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181465 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181404 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181343 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181282 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181221 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181160 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181099 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181038 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180977 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180916 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180855 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180794 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180733 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180672 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180611 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180550 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180489 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180428 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180367 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180306 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180245 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180184 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180123 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180062 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180001 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 179940 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 179879 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 179818 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 179757 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179696 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179635 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179574 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179516 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //