Array 1 1375188-1373844 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593886.1 Gemmata massiliana isolate Soil9 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1375187 36 100.0 36 .................................... GCAGATCGCGAGCATCCGCACCGACCTCGCGTCCGC 1375115 36 100.0 37 .................................... CACGTGGGCGGATTATGTGCGCTGCAAGAGGAACCGT 1375042 36 100.0 37 .................................... CCCGAAGGTGATGACTTGGTTGTCAGTCAGAGCAGCG 1374969 36 100.0 34 .................................... AGTACGTCGATAACAGCGAGACCATTTACGTTAA 1374899 36 100.0 35 .................................... GTGGGCGCGCTCGCAGCACGGGCTAAAGATCACGC 1374828 36 100.0 42 .................................... AACCCGCACGCCTTCAGAAACAACAGCGCGCCCGTCAGCGTC 1374750 36 100.0 38 .................................... GGTGGAACGAATAAGCCGTACTTCGTGCTGTTCTCCGC 1374676 36 100.0 36 .................................... GCTGACACACCAGCGGGTCAGGTCGCAGCGGCTGAA 1374604 36 100.0 41 .................................... CACGGACCCGAACAACGACGCGACACCGCGCGGGTACCGGA 1374527 36 97.2 34 ..............A..................... TTCTGCTCGACACCTCTTCCCGCGCGCGTTATGT 1374457 36 100.0 34 .................................... GCCGATATATGGGCGGATGCGTTCACTGAGTTGC 1374387 36 100.0 38 .................................... ACCACGATCACCCTGAACGCGAACTGCGGGTTCAAGGA 1374313 36 100.0 36 .................................... GAGCCGCTCGAACGATACCGCGGCGGCATGGGAGAA 1374241 36 100.0 36 .................................... CTCTTTGACATTGTGATATCCTCTTGGTTACAGGGA 1374169 36 100.0 36 .................................... GCCAACAGCCTGCATTTGCTCGTTGCGGACGTTGGT 1374097 36 100.0 35 .................................... GCAGCTGGTAACCGCGCGGTTACCAGCTGCTCCCC 1374026 36 100.0 37 .................................... GCGACGGGTCCGGTAGCGGCCTGATGCGCCTGAAGGC 1373953 36 100.0 38 .................................... CGGCTGGCCCGGAAAAACGCGCGGGCCGCGCCGGCGCC 1373879 36 94.4 0 ........A.......G................... | ========== ====== ====== ====== ==================================== ========================================== ================== 19 36 99.6 37 TTAGCAACGCGGGCGCAGACGGGGCGGGAGTGGAAC # Left flank : CTGATCACGACAGTCACTCAGAGATTTCAGTTTCTCTTATTGGTCTTCTCTCTGGTCGTTGCGGGCGCGCTCAATGCCCGATCCCAATCGCACATGATCGGCGTCTTTGCCCTGGGCTTCTCGATGACCTTCATTCTCTCGGGATCTTTAAATCGCGCGCGTCGGAAGCTCGAAGCCGTGAAGGTGCGATTGCTACAAGATCCATCGCACCCGTATACGCTCATCAATGGGGATGTTGGCAACCGACCAATACTCCGAGACATGATGGAGCATGTGCTTCCGCTCGGAATCTGGCTGGTGCTGTTACTAGCAACGGTACTGGCCGCGCTCGAAGTTATCACGCCGGCTCCTCGTTAAACCGCTCGCGTCCCCCAGCCCCTTCGACCGCCAGCACTTGCGCCGATGCCTCCATCGATCACGTCGGCCCGCACCCCGGATCGGGCTACCGCTCGCGGAGGGGCGCACAAGTACCGTGGGAGCAAGAGCTTTGGAGTGTCAGA # Right flank : CGCCAGGGCTAGCGGGTCGGAGGCCAAACGATATTGTGCTTCGCCAGAATCGCGTATGCCTCGTGAACTATCGCGTCCGCTCCCTCTCTGGTCACTTCACCCAAGCCGCTTTGCCGTGACCAATTCTCGGCGTAACGCAACAGATCCTCATGCGTCACGGGGCCGGGGCCGAGCAACAACTCTGCTGGTCGATCCCCGCCACCAACGCCGATCAATCTCCCCCTCGCGACAGTGATCCAGTTCAGAAACGCCCCTGCTCGATCTTCCACGTTTCGATCCTCCTCGGAGTGGGGCGCCCGAAATGAGTGCCCCTACCCTGATGCGCCAAATCCGGAGGGCGCAGGCGCGCGGAAATTCGACGTATCGCGCTCGGAGATTAGAGGTTGCAACTATTTTTGGGAAATTGAATTTTGTCGTGGCTTACTACCGCGCTCTCCCTGCGCGCCAGTTGCGCGAACGCTTCTTCGGTCGCCTGGGGCCGGTGAAGGTCGATCGGGTCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAGCAACGCGGGCGCAGACGGGGCGGGAGTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 3369441-3368019 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593886.1 Gemmata massiliana isolate Soil9 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 3369440 36 100.0 38 .................................... ACGGTAGAAGAGTACCGGGAGATTTACGAGGACGCGAT 3369366 36 100.0 35 .................................... CAATACGATCCTTCGGCCTCCTCCCCACGGCGGAA 3369295 36 100.0 35 .................................... AGAGTCGGACGGGTGATGTGATGGCACAATCTAAC 3369224 36 100.0 38 .................................... TTCATCCCGTCGCAGAGCGAATGCGACGAGATGTATCT 3369150 36 100.0 40 .................................... TCAACGTCCCGGACGCATACCAACGCCTGAAGAATCTTGG 3369074 36 100.0 38 .................................... AAGATCGACAAGGCTGAGAAGAAATGGAAGGATCTGTT 3369000 36 100.0 38 .................................... GTTGGTCCCGCTGGGGTCCAGGATCGGCATCCGCACGG 3368926 36 100.0 35 .................................... CAAGGGATAGTCAAATGGGGCGAGCGGGTCGAAGG 3368855 36 100.0 36 .................................... ACGACACCGCGTCGGTCCTGATCGTCACGGCCGGGA 3368783 36 100.0 36 .................................... GCAGAAGAAGCTGGAGGAAGAGAAGAAGAAGATCGA 3368711 36 100.0 37 .................................... GACACTTCACTACCTCCCCATCGTTAGCGAGTTTGAG 3368638 36 100.0 35 .................................... GTCGAAGGTAAGATCGACAAGGCTGAGAAGAAATG 3368567 36 100.0 36 .................................... TACACGACGAGCGAGATGCGTCGCGACCTGGACGAC 3368495 36 100.0 35 .................................... TCGATCAGCAGCGGCGTCAACAACTGATTAGCCTG 3368424 36 100.0 41 .................................... CCACGACACTGACCGGCCCGGAGTTGCTCCGACTCTCGGAG 3368347 36 100.0 38 .................................... GGCTGGTCACGCGTCGAAGTTGCGCGTGAGCTGGGTTT 3368273 36 100.0 38 .................................... CTCGGCGGGGCGACGGTGGTGGTTGCCCTGCCGCTTCG 3368199 36 100.0 35 .................................... GAGGTCATGCTCGGCATCGAAGCGATCTCCAAATT 3368128 36 100.0 38 .................................... AAAAAGAATACCTCAAAGTGCTCGCGGAGATGCAGGCG 3368054 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 20 36 100.0 37 GCTTCAATTCGGCCCCAGATGTATCTGGGGAGAGAC # Left flank : GCACCCGGTGAACGTGTTCTTGGTGGACCGCCGGGCGCTCTTACCATCGATCGCCACGTGCACCAGGCCGGTACTCTCGCATGCGGCTGCCATCCAGCGCCCGAACCGGTCCGCGAACGCGTCCGGGTCCAGCTTGGCGAACACGCGCTCGAACGTGTCCGGGCTCGGAACCCCGTGGGGCAACCGCAGGTACGGGGCGAACAACGTTTGCTTGGCCCGACCGAACGCGGCCACCTGGTCCCACCCGTCGGCCCCGGCGATCACCGCACACGTGGCCAACGTGAGGATATCCACCAGCTCATGCAACTTGTTCTTCGTTTCGCGGCGCGGGTCTGGCACATCCGCAAACACCGCCAGCAGCGGAATACTCATCGGGGTTCCTCCATAACAACCCCGATATAGACGTAAATGCGGCTGCCGTCACGGGTTCATAGTGCGCCAACCCTGGTATCTGGGGAGAGACGGCCCAAAGCGGCCTCGAATTCGGCACCGAGAAAACG # Right flank : GCCATTCGTCGGAACCCGTGTGGCCGCAACAGAATGGAGCGTCCTCTGCGAGCGGTGGCGGTTTGGGGAGTTGGGGAGACGCTGTGCGGCGACGGGGGTAGTTCTAAGTCTTGTTGAGATTGGGGGTTGCGGCTCGCGAGCGGGGATGAGCCGCAACTTCAATGGTATACCCTGAGTTGTCAAAGACCTACGGCGCGAAGCCGGCACGCGGCCGATTTCATCACCGGCGCCCTCGGGGCAGATCAAACGTCGGAGCGCCCCCACAACCACTGACTCGGGTTGCTGGGTCGACGGTCTGAGGATGGAGGCGGTGGTGTCTGATGTCAAGCGGGAACTCCATAACATCGAGTCCAAATTTCGCGGTTTTTTGTAGCATTTTCAGCCAAATTCCACCGCGAAAACTCCCATTCCGCGGTACCGACCCGCCCCAATTGCTAACGGACCGCTAACAGGATGCGAAAATCGCACGCGGACGTGGTAACGCGGGTAGCGCGGCGTGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCGGCCCCAGATGTATCTGGGGAGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.50,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 3370693-3377796 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593886.1 Gemmata massiliana isolate Soil9 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 3370693 36 94.4 37 .G.C................................ GATGGGGTTAACACTCCACCGGGTGAAGTGAAGACGT G [3370699] 3370767 36 100.0 35 .................................... AGCGTGTGCCTGCCGGCGTGGTTGTGGGCGTCCGA 3370838 36 100.0 37 .................................... CAGCGCCGCCCTCGTCGTAAACTTGATCCTTCGAGAG 3370911 36 100.0 39 .................................... GCCGATCCGATCTTTGATTAAAACGTTGGTTGCGGCCAT 3370986 36 100.0 36 .................................... CGTTTACAACCCTTGAGATCACGCGCGGCCGAACCC 3371058 36 100.0 36 .................................... TCAGGGGGCGCTCGCCGGGCGCCCGATGCCGTCCGT 3371130 36 100.0 38 .................................... GATTCGCTCCGAGACTTGTTCGCGCGGACGCCGAACTT 3371204 36 100.0 39 .................................... ACCGGCGCCCGGCTTGAAGTGAATGTTCCGCGCGGCAAC 3371279 36 100.0 39 .................................... AGTACCTCGTTGATTCCGGCGTGACGATCACGGCGAAGG 3371354 36 100.0 35 .................................... TTCTTGCGGCGGAGTTGCGTTTCGGCATTGCTCTT 3371425 36 100.0 39 .................................... GCGGTTTTGGCCGACTGGTTCCACGTGAGGTTTTCGGCC 3371500 36 100.0 38 .................................... CCTCTGGTTCGTGATCTCTATCGTTGGCTACCTCGATT 3371574 36 100.0 37 .................................... ATGATTCCCGGAGGAGTCGCGGAAACCGTCGCTTCGG 3371647 36 100.0 36 .................................... CTTTAAGCGCTCTAATACGCTCCAATGCCGCCCGAC 3371719 36 100.0 36 .................................... GTCGGTTGCACGTTCGGGAACGACGGTGGGTAACTG 3371791 36 100.0 39 .................................... GAGACGCTTTCCGTTCGCGTCGCCTGCGACTGGCTGAGG 3371866 36 100.0 38 .................................... TCGTGCTCCGGGGCAAGCCGAACCAGATCAGTAGCAGC 3371940 36 100.0 37 .................................... CCGTCCCCTTCCCGTCCGAGAACTTGCGAACGGTCGA 3372013 36 97.2 42 ........G........................... CCCGCCGCGTCCACCGGCTGCATCGGCTTCCACCGCTGGCAC 3372091 36 100.0 39 .................................... GTGCAGGAGTATCTGCTCAAGCCAAACGCAACGGAAGCC 3372166 36 100.0 35 .................................... GGATACCGGCACCCGGCCACCGGCTTGCCGATGCC 3372237 36 100.0 37 .................................... ACTTCGTGAGCAATGACGACACCTACCACACGCCCGC 3372310 36 100.0 39 .................................... GACATCACCGAGGGCGTCGCGGACTTCATCCGCACGGGT 3372385 36 100.0 33 .................................... TTTCAACCACGCGGTCAGCGGTGTGACAGCAAG 3372454 36 100.0 40 .................................... GACGAGCGCGTGGCGGTTGTGCATCGAACTCGGGTTCGAC 3372530 36 100.0 35 .................................... CGAAGCAGCGTACACGATCTGGACGCCGTCGTCGC 3372601 36 100.0 35 .................................... TTTCTCGTGTACTATTCACTCGACAGTACACGGGA 3372672 36 100.0 38 .................................... CGGGGCCGGCGAGGTGACTTCCTTATCGAAAAGCTCAT 3372746 36 100.0 35 .................................... GAGAGATCGCCAACCGTTCGGATCGGCATCGGTTG 3372817 36 100.0 38 .................................... ATCCGCTTCGTCTGACCGCCCGGGTTCGTCGGCTTCTT 3372891 36 100.0 42 .................................... CCGCGGGCCGAAGTGATATCAGTCGATCTGGGGGCCGGTGAA 3372969 36 100.0 37 .................................... ATGCTCACCGTCACACTGTGGACCGCGACCAGCGGGG 3373042 36 100.0 37 .................................... AGACTCTAGGTTCTCCGCAGCATCAGCCTTAGCACTG 3373115 36 100.0 36 .................................... GTTGACAGCTTCCGTGTACAGTTCCTCGGGCCGTTC 3373187 36 100.0 36 .................................... GGGGAGGACTTAGGAGAAAAGGGTTGGAGTAGGGTA 3373259 36 100.0 36 .................................... CGGTTAAACTCTCCGACGGAACTCAACTGACCTGTA 3373331 36 100.0 36 .................................... GGTTCTCTGGTATGGCCACAGACGCTCTTGTGAATC 3373403 36 100.0 36 .................................... CTGCTGTGGGGGCTGACCTCCGCGATTGCCTTCGTA 3373475 36 100.0 37 .................................... TGTCGCGTACTCGCTCGCCTTGACCCCCATTGTCTGA 3373548 36 100.0 36 .................................... GCTCTCCCAGGGTAGGGCCGCTTAGCGTGGCGTCTT 3373620 36 100.0 38 .................................... CCCTCTTCATACGCGCCTTGCTGGTACGCATCCATTGC 3373694 36 100.0 37 .................................... AACGGCGGGTCGGCAAAGAGGAGGTCGACGGAACCCG 3373767 36 100.0 36 .................................... ACGCTCTTGAAACCGAGTTCCCGCAGCGCGTTAGTT 3373839 36 100.0 36 .................................... TGCATCTCATTACGGTGCTGTAACCGGCGGTCGAAC 3373911 36 100.0 36 .................................... CTTTCGCCGGGGCGCCGATCGTGTACACCTTGCCGT 3373983 36 100.0 35 .................................... TGGGTGCTGGCACCGAACCCGTTCGTCCCTGGCGA 3374054 36 100.0 35 .................................... TGTTCGACGTTCAAGGTCTCGGGTGCCGTGTTCCA 3374125 36 100.0 38 .................................... GTCAGGCGCGTGCTCCAGGAGCAACGCGGGTACCGCGA 3374199 36 100.0 37 .................................... GGGTACGGTTCCTCGACGCGCGCGTATGGTATTCCGG 3374272 36 100.0 41 .................................... ACGCCGGGCTCGGGCGACAACAACAAGTTCATTTGGGTCAC 3374349 36 100.0 39 .................................... GTGCCCGGCTGCAGCTCCACGGGCACCTTAACGCCGCGC 3374424 36 100.0 37 .................................... TCTCTTCGATCACGAACCGCGGGATGCAGCGGTAGAG 3374497 36 100.0 37 .................................... ACTCGCTCCCTCAAGTGGGCCGACTCGTCGCCGTGGA 3374570 36 100.0 35 .................................... GCTTCCTCCAGGGTGTACCGGTAGGAGCGCTCGCA 3374641 36 100.0 36 .................................... GCTGGGTCGTCGTTGCACGTTGCACAGCACCGCTGT 3374713 36 100.0 40 .................................... GCGCATGAAACCGATGCCTGTTCCTTAACCGAGTTGTTAC 3374789 36 100.0 36 .................................... GTGTTGGCAGTTCGAACTCGACTCCGGGCCACTCGA 3374861 36 100.0 37 .................................... CGCCCCCCTCTGCTACGACCACACCTACATCTACACC 3374934 36 100.0 35 .................................... CCTACCGCGCGTTCAAATGCGCCCTGTGGTCCGCT 3375005 36 100.0 36 .................................... TTGCGCTTATCGCGCAGCACCGTGTATACGCGCCGG 3375077 36 100.0 35 .................................... TCGATGTGTCCGTACTCGCGCCCGTCATCGAGCAC 3375148 36 100.0 35 .................................... CGGACCTTCGCGGACACGCCCGCGGGACAGGTCGC 3375219 36 100.0 35 .................................... GTCCGCGGCACGATCTACAGGTTCCTCGGAAGGTG 3375290 36 100.0 35 .................................... GATTTTTCAGCCATGTCGCACTCTTCCTCTTCCGT 3375361 36 100.0 37 .................................... GACGCTCATCTTCGTCCGTCTGATCGGGGCGCCACAC 3375434 36 100.0 37 .................................... CTCGCCTTCTATTTGGCCGGTCGTGTCGATGTAAACG 3375507 36 100.0 36 .................................... GGCGACAAGGTGTACGAACTGCGCCGCGGGAAGGGT 3375579 36 100.0 35 .................................... CACCCCTTCCCACCGCCCCCTTCCTCTCCCTCATC 3375650 36 100.0 36 .................................... TTGGAGGTGGGATTCCTCCACCTTCACCTCGACTTC 3375722 36 100.0 41 .................................... ACGGCGACGTGCAGATGACCTTCGCGGCGAACTTCGCTCAG 3375799 36 100.0 34 .................................... TGCCGCGCGACGGGTTGGGGTACTCCATCCCGAA 3375869 36 100.0 36 .................................... GCGAAGTTGCAGAACCCGATCGCGCCAGATGTTCGG 3375941 36 100.0 36 .................................... AACTGCCTAAGAGTCAAGACCGTCTCGCAGTGCCCA 3376013 36 100.0 37 .................................... GTGATCGCCACATCCGGCCCGGAACACGTCCCCGGAG 3376086 36 100.0 40 .................................... CCGCCAGCGCGCCGCCCACGTCGGATCGCGTAGCCGCGTC 3376162 36 100.0 35 .................................... GACGAGCGAACCAGCTCGGTACCGATGACTGCTGA 3376233 36 100.0 38 .................................... CTAAAGTGGTCGCGCGACCACTTTTTAACACCAGAGGA 3376307 36 100.0 38 .................................... GGCACCAACACGTACATGATTGACGTGTATAAGAAGGC 3376381 36 100.0 37 .................................... TCCTCGCCCATCTCGATTTCGATCTTGGCGTTGGGGA 3376454 36 100.0 38 .................................... CCGATCCCGACCAACGTCAACATCTGCATCAAGTGCGA 3376528 36 100.0 37 .................................... TGCAGCTGCCCCCGGTCAGGGCTCAACTGATTGAGCC 3376601 36 100.0 36 .................................... CGAGCCAGGTTGTCGATCTGGCCGGCTAACATGATC 3376673 36 100.0 36 .................................... AATGCTGATCGGCGTTTGCAGTCCCGCACTCTTGAT 3376745 36 100.0 36 .................................... ACCAATCGTGTATGTCTTGTTTGCCGCGGCAGTTTC 3376817 36 100.0 36 .................................... ACCCACTTCCACCTCTTGCGGTGTCCGCAGGTCGCT 3376889 36 100.0 37 .................................... CACTCCTCCAGTTGACGATTTCGTTGCAATGTGCGGT 3376962 36 100.0 37 .................................... GGATGTAGCCCGGAATTTCCGAGCTTCGGTTCACTTG 3377035 36 100.0 38 .................................... GTCGTGCGTGATCCTTCGTGGCGGCCATTCATCGTGAA 3377109 36 100.0 34 .................................... GTCCTCGCCGCGTTCGGCACCCCGCCTTCAATCA 3377179 36 100.0 37 .................................... CTTGGCCGCAGCCTTCAGGCTGGCGCCCATCCGCTTA 3377252 36 100.0 38 .................................... GGTAGTCCTGTAGTGCAGCCCCGATGCGATGATCTGCC 3377326 36 100.0 41 .................................... CCGTGTGGGCGGCCCGCTCCTTCACCAGCGCGCCGCGGGTG 3377403 36 100.0 33 .................................... GAGGTGCAGGCTGATGTGATGCGTGCGAAGCAC G [3377420] 3377473 36 91.7 36 AAA................................. TTGTCTTTCCCGACCCGGTTCGATCGGGTTTTCACG C,G [3377484,3377488] 3377547 36 91.7 32 AAA................................. TCTCGTTGGGGACACCGAGGGTCACGATCTTC C,G [3377558,3377562] 3377617 36 94.4 33 .GA................................. CAAGTCGTGTCCCACGCGCGCCCGATCCAGTCG C,G [3377628,3377632] 3377688 36 88.9 35 AAA.......................A......... CTGGCCGTGGCTCGCGACCTGGGCGTGATCGACCC C,G [3377699,3377703] 3377761 36 94.4 0 .............C.....................T | ========== ====== ====== ====== ==================================== ========================================== ================== 98 36 99.5 37 GTCTCTCCCCAGATACATCTGGGGCCGAATTGAAGC # Left flank : TTCGCGCGGGCCGGGGAGGACGCGTTCGCCGGGTGTGACATGGGGTCCGCGGTCGAGGACGGGCACGGGCGCGAGGAAGAGCGGTACGTGACGGTGGTTGAAGATCCGGAAGGGCTACCGAGCGGGTGGGCCGATGTTGGGGCCGTGGCCCTGGTGTGCCGGGAGCGGGTGGTGAACGGGAAGCCGAATGAGAGCACCGCCCATTACTACCTCACCAGCTTGCGGATCGGGGCGGTCGAGCTGGCGGGGTACATCCGCAACCATTGGGGCATTGAGAACGGGCTCCATTGGTGTCTGGACATCGCGTTCCGGGAAGACGACAGCCGGGCTCGGGCCGGACACGCCGGGGCCAACCTGGGCATGATTCGCCGGGTTGCCCTGTCCCTGCTCCAGCGGGCGGACACCAAGGGCAGCATTCGTACTCGACGCATGAAGGCCGCCTGGGACGATCAATACCTGCTCAAAGTGCTTAAGATTCTGACGACTAAATGAAGTGCGCC # Right flank : TTTCCTGTGCAGCTTCTACAGCGGCGTGTTGGGTGGGAGGAGAATCTTGGCAGCCGTCCGTGATCGCAGGGCATGGGAGCTTTAGCAACCCATGCCCTGCGATCACGGACGGCACAATGAATTGGCACCAGTCGGGCTTACTTCTTGCCTTTGAGTTGCGGCAGGACCGCGGGGTCGGCGAACTTTTCCGGTTCGGCCTCGAACTTCTTCTTGGCGGTGGCGTTCCAGAAGTAGACCTTCACGCCCTTGTACTCCGCCGACACGTCCTTGCTGCTGACCACCTTGTCGCGGTACACCGGGCAGTACACCTGCTCGATTTTCCGCTTCGGCAGTTCCTTGCCCTTCAGTTGCGGGAGCAGTTCCGGGATCAGGTACGCTTCCGGCTCGGCCTTGAACTTCTTCAGGCACGTGTCGCAGCACAACTGGATTTTCACACCGTTCCACTCGACGATCTTGGCGTCTTCGCCGATCTCGTCCTTGGTCATGATCGGGCAGTTCAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTCCCCAGATACATCTGGGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.50,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 4 9116889-9109972 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR593886.1 Gemmata massiliana isolate Soil9 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 9116888 36 100.0 36 .................................... AAAAACGGTTTGGCGAAGTGCGGCATGACGAACCTC 9116816 36 100.0 41 .................................... CCTCACTCCAAGGAGATACCCGTGTTCTTCGTCATGCTCGT 9116739 36 100.0 38 .................................... CTGCCGTTCCCGATCGGCGACGCCTCTGAGCGCGTGTC 9116665 36 100.0 35 .................................... GACCGGTACGCAGTTCCGGCTGCCCAAACCGGGAT 9116594 36 100.0 37 .................................... TATGGTTATCCGGGCACCGTCTGAGACACTTGGACGA 9116521 36 100.0 36 .................................... CGGCTGCCCAAACCGGGATCTGTACGAAGGTGCCCA 9116449 36 100.0 36 .................................... CTGGCCTACGATCACGTCTTCCGGTTCCCCGACCGG 9116377 36 100.0 35 .................................... GAGCTTTGGGTGCAATATGCGACCTGAGCATATTG 9116306 36 100.0 36 .................................... TGCGACCAGGAATATCTAACCTGCGATTGACGGTAT 9116234 36 100.0 37 .................................... CTCGGTGGGGGCGATGCCGGTGGCGGTGGCGGACTCG 9116161 36 100.0 39 .................................... TTGAATGCAGCCCATCACGTGCTCTTTCGCGGCCTTCTC 9116086 36 100.0 37 .................................... TTCCCCCTCCGTCCGGCGACATCAACGTAATCGAGTT 9116013 36 100.0 38 .................................... CACGCCGTTACAGCGCAGGCTTCGCTAACTTGTCGGTC 9115939 36 100.0 37 .................................... CGAATCTTCGGGTATGACGATCCATCCGCGCGAGCGA 9115866 36 100.0 36 .................................... GATTACGAGCGATTTCCCCGTCGAAGGTGTCGCCTC 9115794 36 100.0 38 .................................... ATCACGACGTCCGCATTGCACAGCGAATCGAAACCGTG 9115720 36 100.0 42 .................................... GAGAGCGTTTCCGCGCTCGCCGACCCTGACCGCCAGTCGCGG 9115642 36 100.0 39 .................................... CTCCGGCCGTGGAAGACGCTGATCTTCGCGCCGACCGAG 9115567 36 100.0 36 .................................... ACCACTGAAATTCCCCACCCCGCGGCGAGCGTACTT 9115495 36 100.0 37 .................................... AATGTCACCGTCCCGAAGTTGTCGTCCGCGTAGGGGA 9115422 36 100.0 38 .................................... CCCTCGATTTCAGTTTCAACTACCTGAGCACCGTCGTA 9115348 36 100.0 37 .................................... CTGTAATCGTGGTAGAAACACACCTTTCAATCCTCCA 9115275 36 100.0 37 .................................... ATCAGCCGTCGTACACAAAATCCGACGGCAAGGGGGG 9115202 36 100.0 36 .................................... GATTCCTGCCCGTGCGACTCCCGTTTTACCAACCAG 9115130 36 100.0 38 .................................... TCGTAATCGCTTGCGCCGTGCAGGTGCTCGTCAGCCAG 9115056 36 100.0 36 .................................... AGTTCGACCTGACGACCGCGCCCAACAGCGTGCGGT 9114984 36 100.0 36 .................................... CTTGATCTGCTCGGCGCTGAAGTCGCTGATCCGCAT 9114912 36 100.0 41 .................................... GCCGATCGTCGTCTTAACGTCCGCGGCGGTCCTTTGAAGTT 9114835 36 100.0 37 .................................... GCGAAGGTGTACTGGGACGACACCAACAACAAGCTGA 9114762 36 100.0 36 .................................... GTTTCGCCCGGCTGGAAGGGGTCTACCCAGGGCGGG 9114690 36 100.0 38 .................................... ACCATTTTCGGGCGGGCGCGGTTGAGCGCCTCGCACCA 9114616 36 100.0 36 .................................... TACGGTTGGCGCAACCACGCGAACCGCAAGGTCCGG 9114544 36 100.0 38 .................................... GGCGCCCACCGCGGTCGATCGTCTTCGGTTCGCGCGGC 9114470 36 100.0 37 .................................... GCGAGCTTGCGGAGCGGGCCGGAGTTGTCGTCGCGGT 9114397 36 100.0 39 .................................... CTCAACTCTGCTGCGCAGCAGAGTTGAGGCCGGTCAGTC 9114322 36 100.0 36 .................................... TGCTGCTGTTGCCCCTGGCCCTTCACCGTGCCGGGG 9114250 36 100.0 36 .................................... CCCGGAGTGTAGTCGCGGACGAGAGATTCGCCCTGA 9114178 36 100.0 37 .................................... GGGAGCCCAGTGACACAACCATTCCCACACGTGACAC 9114105 36 100.0 35 .................................... TCAGCTCGGTGATGGTCTGGGCCTGGGCCTTCAGG 9114034 36 100.0 38 .................................... CCCTCGTGGGGGTGTCGCTAGTAACCCCATCTCTTCAA 9113960 36 100.0 38 .................................... TCGTAATCGCTTGCGCCGTGCAGGTGCTCGTCAGCCAG 9113886 36 100.0 36 .................................... AGTTCGACCTGACGACCGCGCCCAACAGCGTGCGGT 9113814 36 100.0 36 .................................... CTTGATCTGCTCGGCGCTGAAGTCGCTGATCCGCAT 9113742 36 100.0 41 .................................... GCCGATCGTCGTCTTAACGTCCGCGGCGGTCCTTTGAAGTT 9113665 36 100.0 43 .................................... GCCGAGGTGTCGGGTTGGGACCGCGACGACTGCGAGAGTTGGC 9113586 36 100.0 36 .................................... TTTATTTCTTCGCGGCCTTCTTGCGTTCCCGGCGAC 9113514 36 100.0 39 .................................... GGCGAGCAGTTCCGGCAGCCGGTAGAGCACCCGACGGAC 9113439 36 100.0 37 .................................... CGCAGAATCCGCTCCTGCTTCGGGCTGCACAGGTTGT 9113366 36 100.0 38 .................................... ATTTCTGTACTCGTCCCTTTTGGCTCTGGCATCGTAGC 9113292 36 100.0 36 .................................... AAAGTCCAACACCTCTGTTTTTGTTGGCTCGGGAGG 9113220 36 100.0 37 .................................... GAGTTGGCTCGGATCTCCTCCGGGGACATCTTCGATT 9113147 36 100.0 36 .................................... ATGTCCGGTACGAGCGGTGGTGTCCACCGCGATTCG 9113075 36 100.0 36 .................................... AGCTCCTCTTTCGCTGCTCCGGCGGTTGCGCACCGA 9113003 36 100.0 37 .................................... CTTCCGCAGCCGCTTCTTTTCCTTACGTTGAGATCTT 9112930 36 100.0 35 .................................... CATTCCCCGTTGAACTTCCGCAGCTTAATGTACTT 9112859 36 100.0 36 .................................... ATCTCCTCCTGAGCGTCGTCCGCACACCGCAACCGG 9112787 36 100.0 36 .................................... ACCCTCGCGAATTGGGCTGTCAAGCTGTGCGGTAAA 9112715 36 100.0 37 .................................... CTTTTGTGCCCGCGTGAGCACGCCGGAATTCATGATG 9112642 36 100.0 38 .................................... TTCAGGTATTTAGCGATGAGTTTTTGCAGCGGCAAGCC 9112568 36 100.0 36 .................................... GGCTTTCCGTGAGTATTGACATACCGGATTTGAGCG 9112496 36 100.0 37 .................................... CACAATGGCCGATCCAAAGAAAACTGAAACCGAAAAG 9112423 36 100.0 37 .................................... CGCCTTATCCCCGCAGATACCCGCAGCGATATGCACC 9112350 36 100.0 40 .................................... AGAAATGCTTGGTTGATGCTAATTGGCACGAAGTGACCGA 9112274 36 100.0 38 .................................... TTTGGTCTCCTATTTAATTTGATTTAATCAAAGATTAA 9112200 36 100.0 38 .................................... CCCTTGAAGAAGGGGACGGAGATTTCTTCGCCGGCCTT 9112126 36 100.0 36 .................................... GACGACTTAAACGCGATGTACCTTGCAGGGATGATG 9112054 36 100.0 37 .................................... GCAATAGCCGTATGACGGCTCATCGATACCCAGGCTC 9111981 36 100.0 36 .................................... TCACCCTGCGCGCCGAACAGTGGGCGAATCGCTGGC 9111909 36 100.0 35 .................................... TGACGGGAAGACTTACACCATTATCGCGACTCCCT 9111838 36 100.0 37 .................................... TCGAAATTAAAGCCGGCGGATGCTGGAGCCGCAGTAT 9111765 36 100.0 38 .................................... GACTCACATTGCGTCGCTCGCTCCGGGCGGCCGGGGTG 9111691 36 100.0 35 .................................... TACCGCTTTGCGCTGAGCGTGCTGTGCCGCTTTCG 9111620 36 100.0 36 .................................... GATGTTCGCGTGTCCGAGCAGCACCTGCGCAGCTTC 9111548 36 100.0 38 .................................... ATCGCGAACGCCAGCCGCAGGAGCGAGTACGTCTTGCC 9111474 36 100.0 37 .................................... CCTACTCACCTCGCAAGTAGCGGATAATCCAATACGC 9111401 36 100.0 37 .................................... AGGTTGCGGATCTCGCGGATCGCTTCGGCCCATTCCC 9111328 36 100.0 36 .................................... AGGTAGCTCAGTGCCGTCTTCTTTATCGTCGGGTCC 9111256 36 100.0 41 .................................... CAAGCGTTATTAGCGTTTGGCGTGACGTGATGCAAGAGGTG 9111179 36 100.0 36 .................................... GCGCTGGGGCGAGTACGACGAGCGCGATGTCGCCGT 9111107 36 100.0 35 .................................... CGGTGATTTCAGCCTCAACAACACGGCCGGGCGCG 9111036 36 100.0 35 .................................... CCGGTGGGCTTGCCCGCATCGTCGAGTTCCTGAAC 9110965 36 100.0 40 .................................... GGGCGTGATGCTCGTCGGGTACCCGTACACCAACCGGCGC 9110889 36 100.0 39 .................................... CAGGCCCAGAAGCTCCGGAAGGCCAACGGAACGTACCTT 9110814 36 100.0 38 .................................... AGCAGTTCCCACGGTTCGACACCCAGCACTGCGGCCAC 9110740 36 100.0 38 .................................... GCTTGAACTGCTCGTAGCTGTGCGACGGGAACAGCGTG 9110666 36 100.0 37 .................................... TTGTGCTCTCGAAACTTCACCGCCCAGTAGGTGTTGC 9110593 36 100.0 37 .................................... CTCGGTGTCGACGACGGCGGCGGCAAGCCCCTGTTCG 9110520 36 100.0 35 .................................... TTTCCCTGGTTCGTGATGTCGTTGGGGAAGTCCTG 9110449 36 100.0 37 .................................... CAGGGGGTGGGGTGCTCCCTGTCTTGTCTTGTTCCTT 9110376 36 100.0 39 .................................... ATGGCTGTTCTCCTTTCCGGATTGTACCAGTCGAATCAA 9110301 36 100.0 37 .................................... TGCGGTCTGGTTAAATGTTCAGGCCCCGCACCCCTAT 9110228 36 100.0 38 .................................... GTGATCCACCGGCCGTCGTAGGCCTGGTTCAGCACGAA 9110154 36 100.0 39 .................................... GCGACCCATTGGGCACCTGTGGACGATTCCCGGTTTGGA 9110079 36 100.0 36 .................................... GCGGGCGATTCCTTGATACTCGGCGATGCTCCGCCC 9110007 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =========================================== ================== 95 36 100.0 37 GTCTCCACGGTTCACCAACCGTGGCCGAATTGAAGC # Left flank : GCGACCTTTTGCGGCTTCTGAATACCCACAAATGAGTTCCGTGGCGTGACTTCCGGGAAAATCGGGTCGCAAACATGTACTGGATTTGGCCGTGATGGACTTGCCGCTTGACACCGCACGGCATGACCCCGATCCTCAGTTGAAGCTCCGATCCCAGTTTCTCGACGCCGATGCACTCCGGTGTTTGGGCTTAACGACCATTTATCAAAGTCAAAGAATCTTGGTGGGCAAAACCTCGAACCGCGCGTTCGCGTGACGCGCCCCGAGAGCACTGGTGGTGAACTCGGTCCCGAGCCGATTTCGCGCCGTAGGTCTTTGACAATTCAGAACATTCCATTGGAGTTGCGGCTCGTAGCCGCTCGCAAGCCGTAACTTCCAAACCCAACAACGACTTGAGGCTCCCATGCCCGCAACTCTACGGCCGCCCACGCCCTATTAATCGCAACTGCTCGCGGAATGTGCCCCATTCCGTTGTCACTACACGTGTTCCAACGAGCGTT # Right flank : GATACCCGATGACGGAGGACTCAAGCGTGAGGTCGCAGCTTGGGAACTTCGACGCAACGCGGCCTCGGCGCCCGCCTAGCGCTGCCAATTCAACGACCTCGCTTCAGTGCGCCCACGGTAGGGTTGCTGATCATATAATCGCACCGATACCCTCTCCGGAGCAGCTATGCCCACCGCCGCGCCCGCCGAATGTGTCGTGTTGGTCCCGGTGGATGGCGCCATCGAACCCGGGTGCGAAGACGCGCTGCGGGAGCTGGAGCGCCGTGGGTACCCGGTGTGGCGATACCGCGGGTACTCGGCCGTCGATGCGGCGCGCAACCAGATGGCCTCGGACGCGCTCGGGGCCGGGTTCGCCGAACTCATGTGGATCGATTCGGACGTGGTGTTCGAGCCCGACGACGTGGACCGGCTGCGCGCCCACGCGCACCCGTTCACGTGCGGGCTGTACCCGAAGAAGGGACCGCGCGAGTTCGCGTGCGAGTTCATGCCGGGCACACCCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACGGTTCACCAACCGTGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //