Array 1 83914-80522 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNVV01000009.1 Xanthomonas translucens strain XT5791 flattened_line_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 83913 31 100.0 34 ............................... TAGTTAACGCCGATGTGCCTGCGATCCTGCTTGC 83848 31 100.0 35 ............................... GCGTCCTGCCTTATTTTCTTCCACTTGCCGTGTTC 83782 31 100.0 36 ............................... GTTGCTGTCCATGTCGTGGATATCGTAAAACTTCAT 83715 31 100.0 35 ............................... CCGCCCACGTAGGTTGCGGCCTTGGGTGCAGTATC 83649 31 100.0 35 ............................... TTGCCGCCGACTCCGGTGTAGCCGCCGCCCGAGAG 83583 31 100.0 35 ............................... CGGTTTGGTGGCTGGCGCTATCTTGCGCGGGCGGC 83517 31 100.0 35 ............................... AAGCCGCACTGTGGCGGCATGCGCCTTCGCTAGCG 83451 31 100.0 34 ............................... TCGGTGTAGAGGATATGCAGGCCGATGCGCTGCG 83386 31 100.0 36 ............................... TCGTACTTGCTGTACCGGATCATGCCCGCGACTGCG 83319 31 100.0 34 ............................... CGGTACGGGCGAACGTCAGGGCAATGCCGTTGCC 83254 31 100.0 36 ............................... TTGAATCGGCCGGCATGTTCAACGCGCTGGGCCAGG 83187 31 100.0 34 ............................... TTTACGAGCATCCCGATGACATGGTAGCGGACGG 83122 31 100.0 33 ............................... TCGCTGGGCGCGCAGATCTTTGATCGCTGGGAA 83058 31 100.0 36 ............................... GCTTTCCACCTGGCGTCTTGCCGTCCAGGTGCGCAG 82991 31 100.0 34 ............................... CCTTATGCCGGCGCAACAGCGCCTGCTGGGTGGC 82926 31 100.0 33 ............................... ACCTTGCCAGCGCCGCTGTCGCTGCCGAAGCGT 82862 31 100.0 35 ............................... CCTTGTGTACGCCGGCACCAGTTTCTCGCGCACGG 82796 31 100.0 35 ............................... ACTTCCAGTAAGCCTTCGTCGCCAACCAATGTGTC 82730 31 100.0 34 ............................... TGACTGAGCGCGTCTGGCCTTGGGCCATCCGATC 82665 31 100.0 37 ............................... AGTTTTCACCCGTGCGGCGCGTAGCGGGATGATTCGC 82597 31 100.0 36 ............................... ATATCGATCTGTTCGCGCGCACGCACGCACAAGATA 82530 31 100.0 36 ............................... CACGATGAGTTGACGGTCGGGGTACAGCGCGCGGGC 82463 31 100.0 36 ............................... TGTCGCTCATCATCTTCCCCTTTGGCCGTAGCTCGG 82396 31 100.0 36 ............................... CAGCACAGACGTGCGCGCGCAGCCGCGCGGCGTGGA 82329 31 100.0 34 ............................... TCAAAGCTGTAGAGCGGCGCGCCGACCGCGTTAT 82264 31 100.0 33 ............................... TTCATCCTGCCGGCCAAGGAGGCGGCCCGCGTC 82200 31 100.0 36 ............................... CTGCGGAACAAGCCGGCCATGGAGCGTGCGCGCCAG 82133 31 100.0 35 ............................... TTCGCTCAGGCGCGCAAGTTCTTCGAGCTCGCCAC 82067 31 100.0 35 ............................... GCGTACCCTAGCGCCTGCCGCGCGGTCGCATTATC 82001 31 100.0 36 ............................... CTCGACGCGCTGCGCAGCGGCAAGCTGCCCAGCGAT 81934 31 100.0 35 ............................... ACGTTCGCCCCGAGATTATCCAGGTCGCCCCCCAG 81868 31 100.0 34 ............................... ATCCTCATCGTCACGATAAAACTCTACCGTCACA 81803 31 100.0 35 ............................... CCCAGATCCTTGCGCCCCTCGTACGCACGGCCAGA 81737 31 100.0 35 ............................... TTAAGCCCCACGATCGCCTCGGCGGTGCGCGTGAA 81671 31 100.0 34 ............................... TTGCGCATCTTTCGTCAAGTCGTCATTGATCGCG 81606 31 100.0 35 ............................... CGGTCACCAGCAGCGACGCAGCGCGCGCATCGCAG 81540 31 100.0 34 ............................... TCAAGCGTCGAGACGATGCCGTACCGCGCGCACG 81475 31 100.0 34 ............................... ACGCGCGCCCACCGCGACATGCGCTCGCAGGTGG 81410 31 100.0 36 ............................... TTGACCTCCGTCGCTATCTTCGTAGCGGCCATGGGC 81343 31 100.0 33 ............................... TCAGATTAAGCGCAGGATGCGCGAAACAAAGGT 81279 31 100.0 35 ............................... ATTGAAAACGAGCATGTCACCAAATCCCCAGCGTC 81213 31 100.0 35 ............................... GGCTTCGCGCCGCTGGTGCCGACCGTTTCGCGCCT 81147 31 100.0 34 ............................... CACGAGGACCCAAGGAGTAGCGCCTACTGCCACC 81082 31 100.0 37 ............................... TGGGCGTTTACCGTAGTGCGGCCGTCTATGCTTTCGA 81014 31 100.0 36 ............................... ACGGAGGCGCTGCTAGCAAGCATGCGCATGCCGCTG 80947 31 100.0 35 ............................... AGAAATATGTCGGAAGTGTCCATTGACGCGGTTGC 80881 31 100.0 34 ............................... TCAGCCTGCGTTGCTTCCCGCAAGTTAGAGACCC 80816 31 100.0 36 ............................... ATGGCTCAGTCTCGCTGGCGGGTGGCCGGTGTGGCC 80749 31 100.0 35 ............................... ATATGCCCGGTAGCGGCCGTCTTCTCCCATACCCA 80683 31 100.0 33 ............................... CCGTACTACGTCACCGGCAACTTCGAGGGTGGT 80619 31 100.0 35 ............................... ACCCATGCCATGTCGTCCCGGCGCCACTCGACATC 80553 31 87.1 0 ......CG.......C.........C..... | G [80526] ========== ====== ====== ====== =============================== ===================================== ================== 52 31 99.8 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGATCAGCTACGATGTCAGCACGAGTTCCCCAGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAAGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAACTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : TGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAATGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGATGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGACCGTTCACGGTTACCTCGGCCTTGTACTTGCCCGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //