Array 1 70375-70586 **** Predicted by CRISPRDetect 2.4 *** >NZ_BANG01000005.1 Gluconobacter frateurii M-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70375 29 100.0 32 ............................. TAGGATGACGTGTCATTTTCGACCGGGGGAGC 70436 29 100.0 32 ............................. TAAGAATAGCGCGCTCGCCGCGTGGGAAGGAT 70497 29 100.0 32 ............................. ATCATTTCCGTTCCACCTGGCACACAGTCAGC 70558 29 89.7 0 .......................A..T.T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGCCTCGTCCCCATGATCGAAGATGTTCTCTCCGCAGGAGGCCTGTCACCCCCTGAAGCACCGGAAGAAGCCATGCCTGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGGTCATCGTGGTTGAAAACGCTCCACCGCGACTGCGAGGGCGGCTCGCCGTCTGGCTGCTGGAGATCCGCGCAGGCGTATATGTCGGTACCTATGGCCGAAAAGTACGCGAGATGATCTGGCAGCAGGTCTGCGCCTATATTGAACAGGGAAACGCTGTTATCGCATGGGCTGCTCCCAATGACGCAGGCTTCGAGTTCGACACCTGCGGCGCCAACAGACGATGCCCCGTGGACCTTGATGGATTTCGTCTGGTCGAGTTCGGTCCAGAAGCTGCCCTCCCCCTCCTGCCCGGCCCCCTCAATTCACCACGAAACCGACGCTGAAAAATCGGTAGCTTTTTGAAGTGGAAGATTTGCACCCATAATCATATACTTACAAACAAGG # Right flank : TTTACCGTCAGGCTTCTGAGCCCTGCACAACCGCACTCATTCTCCCCACATTCTTGCACACAAGGAGACAGATCATGAGCAAGCTCAGTACAGAGGAACGGAACAGCCTGCCTGACAGGGAATTCGGGCTTCCTGAAAAACGGGCCTATCCCGTCGATACAAAGGCCAGGGCACGGAATGCGAAAGCCCGTGCCACGCAGGAGATGGAACGGGGGCTGCTGACACCGGAAGAACGGGATGAGATTGACCGGGCAGCAGATCGCAAACTGAACGAAGACTAAGCCAGAATCAGAAACGGCCCCGGATCACTCCGAGGCCGTTTCATCATTCAATTCCGCAGTCAGTGAGCCTGCGCTGCCCGCAATGGAGCATCTGCCGGAACATCCTTGAGCGGAATGCCCTGATACTTGCCCGTCAGGGTCTTCAGGAACGCAACGATGTCTGCAACATCCTGATCACTGATATCATGATCGGGCGTTTCGTAACGCGCCATGGCACGA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 158385-158718 **** Predicted by CRISPRDetect 2.4 *** >NZ_BANG01000010.1 Gluconobacter frateurii M-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 158385 29 100.0 32 ............................. GAATTTCCCGCATTGCCCATTCGGGTTCCGTC 158446 29 100.0 32 ............................. AACCGACCGAAAAATCAGGGCGGGGAATAATG 158507 29 100.0 32 ............................. GTTTGCCCGGAAATACAACAACCGCGTCTTCA 158568 29 100.0 32 ............................. ACATCGACGAGCCCGTGCTGGCTCGCGGCTTG 158629 29 100.0 32 ............................. ACGGGCGTGTCTGTGGACAGCACGAGTACGAT 158690 29 89.7 0 ......................C...GG. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTGTTCCCCGCATGTGCGGGGATGAACCG # Left flank : TCGGGAACTGCGCGTCCCGTTCCGGACGGCTCATCATGTCACGGGGCGTCTGGTCGGACTGGCCGAGCAGCGCGGTTGTGATCTGGCGGATCTGTCCCTTGAGGATATGCAGGCCGTGGAGCCGGGAATCAACGCTGGTATTTTTGATGTTCTGACGGTTGAATCCTCACTGGCTTCCCGCACCAGTCTGGGCGGAACTGCTCCGTCCAACGTGCGCCAGCAGGCTCAGGCCTGGCTGGAGAAACTTGGAGACGCTGCATGACACGTTTTCTGCTTGTTGGCCTGACACTCGTAGCGCTCAGCACTGGCCTGAGCGCCTGCGGGAAGAAAGGGGCGCCACATGCACCCGGCCCCGCCTCCGACATCACCTATCCCCGGAGTTATCCGCCTGAATAACGGGCTTTCAGATAAGTCTTACAGGGGCCGAAAACAGGCCATAAAAATCGGTAGATTTTTGAGGGTAGAATTTTCCCTTTTCTGTCAGTACCTTGCCAGGAAGA # Right flank : GACTACTGGTGGCCGTAACTTCGATCTCGCCAAATAGTCCTCGCCTGCTCGGGCGTGGATCTACCGCGAGAAGCGATTCCACTTTCTTCAGCCTCAGCGTTTTTCTGAAAACTCTACAGATGCAACAGCCGCCATCAGCTGTCCGCCAGAGCCTTGACTACCAGCGGGTGTGTCAGAACGTCCTCTGCAGGCCAGCCCATCGCCCTGAGCGCTCGAACCCCCTCTGCACCATCCCTTTTGGAAAGCTTCTTTCCGCTCTCATCCAGAATAAGAGCGTGATGCCTGTACTCAGGTTCAGGCCATTTCATCAGGGTCTGAATTACACGATGAATGGATGTCGCAGCGTAAAGGTCCTGCCCTCTCGTGATGCAGGTCACGCCCTGAAGGGCATCATCGTGGGTGACGCACAGATGATAAGACACGCCCGTATCTCTGCGTCCCAGAACAATATCACCAAATTCATCCGCACGCCCCGCAATCCGACCATGACCCGCTTCATA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 62628-63023 **** Predicted by CRISPRDetect 2.4 *** >NZ_BANG01000004.1 Gluconobacter frateurii M-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 62628 29 100.0 32 ............................. GCTTGTTGTCTGTCTCATAGGAATCTCGTTCC 62689 29 100.0 32 ............................. CCGCCGCGCCCGCAATCAGGTCATCATGATAG 62750 29 100.0 32 ............................. TTGACAGACTTCATTTATTATAGCCCTGAATG 62811 29 100.0 33 ............................. CAAAATTGCATCTCGGACAATGAGATTGGGTTT 62873 29 100.0 32 ............................. CGCTTTGCGGGCAACACTGATTAGCCCCGATC 62934 29 100.0 32 ............................. ACGCAGCTTGGCGTTGAGGTGCACTGGACCAC 62995 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ================================= ================== 7 29 99.5 32 GTGTTCCCCGCACGTGCGGGGATGAACCG # Left flank : GCCGTTCCCGGTTATACCGAAGCGCGGCCTCCTGCAGCACGCGGATCATGGGAATCATGGGGCTGCCCATATCCCTGATGCCAGCGAGTTCCCGGTTGCTGGCGGAAAGCAGGGCCGCCAGCGAACCGAAGCGTTCCAGAAGCGCCGGGACAAGACTTTCGGCTTTTTGTTCACGACCCGTAAAAAGATGGACGATCAGCCTCAGAAGTGTGTCGTCGTTCAGATGACGCCCTCGCCCACTCAGGAGTGCAACAGGAGCAGGAATCGTTTCGTGATCCGCTGCCTCCGGCGCGGCTGTCGCTGGTATGGTCTGAAGGAAGGGGCTTCCCAGACAGTCAGAAAATCCATCTTCAGAAGGCTGAGCGTTGGTCATTCGTTTTTCTGGCACTGTAACCCGGACGAGATCAAGGCGTCGTCAGCCTCTCTCGGAAAGGTTGAAAAAATCGGTAGATTTTTCGGGGGCTGTTTTTCTGTTGGAAAACAGTTATCTAACAGGAAGA # Right flank : GGGCTCAGGAAAACGCCAGCTTTCTTTCATTTTATGTTTCCTGCATACGCAGGATTGTTTTTGAAGCAGGGTGTGAGGCTTAAAGGAGACCTTCCTGGCGTAGGCTGCTGAGTTTTTTGTCTTCAGTGCTTAGAAGGACGTCATGCAAGACGATGGAAAGTGGCTTAAGTGCGGTTTCCAGAGTTCTTGCAGCCGTTGACAGGGCTGGTGATCTGAGAGCGGGTTGGACATGCAGGCCGATAATGGCGGTAGCATGTAGCGCCAGTGCGCGAATGGCGATGGCGCGGTTCAGGAAGGTGATATCCTCCTCTTCGGGGGCCGCTTCATCCGCAAGGAGGCGGTTGCGGTTATCCAGATAAAGGATGCGAAGCTGCCCGGGAACCGCGCCTTGTAATGCCGTTTCAAGATAGCTTGTCAGTTGTGGCCAGTTCCCCAGAACCGGACGCTCGCGGCTTTCGGCGGAGGCAAGACGTTCTGCGGCGACTGACGGAAGGCGAAGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //