Array 1 1776326-1773980 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046415.1 Guyparkeria halophila strain sp2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1776325 29 96.6 32 ............................T GAACTGATGGACATTCTCAACATAGTGGAGGA 1776264 29 100.0 32 ............................. TATTGTTGAAGAATGTAGCGTCAGGATCGATA 1776203 29 100.0 32 ............................. GTGCAGGGCGATGTGGATCTCGACGTGACCGG 1776142 29 96.6 32 ............................T CGCCCTCGACCCTCAGGGCGTAGGTGTGATCC 1776081 29 100.0 32 ............................. GGCCGCTCGGGGGCTTCGTAGTGCTCACCTGC 1776020 29 100.0 32 ............................. TGCCGGGCCGATGAATACCTGATACCCGTCCG 1775959 29 96.6 32 ............................T GATTTCCAAGGGCACTGTACAGGCGGAAGAAC 1775898 29 100.0 32 ............................. GCGAGCGGCGTCGCCATGCCCTTTGCGCTCTA 1775837 29 100.0 32 ............................. AGCCGCAAGATCGGCGGATTTCACTTTGGCCG 1775776 29 100.0 32 ............................. AGGCTGAACGCCTTGCGGTGAAAGCCAGGGTT 1775715 29 96.6 32 ............................T CCGTAGCCGGCGTGATTGCCCGTGTTCTGACG 1775654 29 100.0 32 ............................. GTCACCACGATGCACCGCACGCCAAGGCGTGG 1775593 29 96.6 32 ............................T CCAGAGCGCACCCATGCCACGCGCGACACCTA 1775532 29 96.6 32 ............................T TTCCGCAGTTCGTCGACTACCACCGGGCCAAG 1775471 29 100.0 32 ............................. CTGCTGTGCATCCAGCGCACCCTGTGCACCGG 1775410 29 93.1 32 ..........................C.G GACCACCCGAGGAAGGCCAACCGCGGTTTGGG 1775349 29 100.0 32 ............................. AAGGAAGAAGTTGAGCTATACGTTCAGGGGGC 1775288 29 100.0 32 ............................. AAGGAGGAAGCGCGAGACCGCTACGTCACCGA 1775227 29 100.0 32 ............................. AGCGCCGTCAAGTCCGGGCTCTACAGCCTGCC 1775166 29 100.0 32 ............................. GACACCGGCAGCCAGCGCATGTTCATGCGCCG 1775105 29 100.0 32 ............................. CCCCCATTCGGGTTCAGAGCGCGAGAGGGGAA 1775044 29 100.0 32 ............................. TTCGGCAGGCGCAGGCCGTTTAGCTGGTCGAA 1774983 29 100.0 32 ............................. CAGACCATGCGCGCCGAGGCCGGCAGCGATGA 1774922 29 100.0 32 ............................. TGCCCCACACCAGATGGTTGTGTATGTTGAGC 1774861 29 100.0 32 ............................. AGTGTGCATCAGTTGGTCAAGCACACCATTCG 1774800 29 100.0 32 ............................. CACACAGGCACGTTAGCGATGACCGGCATGGA 1774739 29 100.0 32 ............................. CAGGGCGGGTTCTATCCGGCGGTCATCAACCG 1774678 29 100.0 32 ............................. TGGCAGCACTCGCCGGAGTGGAGCGACGAACA 1774617 29 100.0 32 ............................. GTCGAGCATCGTGGCGACACTCGGGGCATTGA 1774556 29 100.0 32 ............................. TTCCCAGTGGTAGGCCGAGCGGACCGGACCGA 1774495 29 100.0 32 ............................. CTGCAAGGCGGCGGCCAAGCAACGGCAGAAGC 1774434 29 100.0 32 ............................. GTGCACCCGTCGAGGAAGCGCGCCTCCCGGTC 1774373 29 100.0 32 ............................. ATGCACAGCCGCGACTGGCTGCCGTCGGCCGA 1774312 29 100.0 32 ............................. CAGGAGATCTACGGCCTGCCGGAGTGCCTGGC 1774251 29 96.6 32 ............................T ACGGCGAGCTGGTCGTCGGTGACCTTGATGCT 1774190 29 93.1 32 ............G...T............ AAGGTCAACCCGGCTCTCGACAGCCATCATCT 1774129 29 93.1 32 ............T...............T GGGTACGGAGTCTGGCCGGAATCAATGCGGAT 1774068 28 89.7 32 ..........T.T........-....... ACACAGCGACCGCCCGCTTTGGGCTAGTAGTG 1774008 29 89.7 0 ...T.........A.............T. | ========== ====== ====== ====== ============================= ================================ ================== 39 29 98.3 32 GTCCTCCCCGCGCGAGCGGGGGTGTTTCC # Left flank : ACAAGGAACACCTCAGCATCGATCTGGCATTCCACATGACGCGCCAGATGGCCGGTCAATATGACAAGCACGAAGTATCCGCCGAGTTTCGGCGACGGGCCGTGGAGATGAACCTGCTCGACCAAGTGGAGCGTGATATCGAAACACTGTTGGGAGGAAAGAAGCGTGGTCGTGGTCGTCGCCAATGATCTGCCACCAGCCGTACGCGGGCGAATGAAGCTCTGGTTTACCGAACCGCGTCCCAATGTCTTCGTATCCGGCATCACGGATGCCGTGTCGAAGACTGTGGTCGAATACCTCGTGGATCATTGCCCGCCGGAATCGGGTGTGATGATCTTTCGCTCCACCCCCGAGCCTCCGGGCCATGAAATACGCACGATTGGGCCGACTCGAAAGGATTTGGTGAATCTCACTGGCTTGTCTTTGGTCGTCGAGACCCTTAAATCCTGAAAAGCTCTATATCTTGAATAGAGCTATGCGCTCCCTCACAATATATTGCG # Right flank : CTTGGGGACGGCAGGTTCTTTTCCAGGAACCCGTTGGCCTTCCCGGTGCGGGTCCGGTGGCAGGCCTTCGGAACGGAAAAGCCCCTCGGTTGAGGCCTGACTTGGATTGCTGGAGTCAGGCGTCGGCCGAGGGGCGTGATCGACATTTAGCCTAGCAGGTTGTTACTTGTTTCGCGGCCTCTGATCCTCGTGAGAATCCGGCGGCGGATTCATGCTTAGACGATTCGTCATTAAGTTCTAATCAATCTCTGTACAATGCCCCTCTTTCAAACCGGTCATGGCGTGACACAAACGCGCGCTACCCGGCGATCGCTCGTGAAAACTTTTGTGTACATATTGGTGTACATAACAACCCGGAATTCGAATGTCAGACCAGAACAAATCTAGCGATGTCAAGAACCTGCGGAACATCGCAATTATCGCCCACGTTGACCACGGCAAGACCACGCTGGTCGACCGCCTCCTGCAGCAATCCGGCACCCTCGATGCCCGCACCGACC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGGTGTTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCGAGCGGGGGTCTACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //