Array 1 72316-76731 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIRP01000003.1 Fusobacterium nucleatum subsp. polymorphum strain KCOM 1278 (=ChDC F313) F313_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 72316 37 100.0 38 ..................................... AATACCATTTATTCAATGTTTCTACCTCCTGAACTAAA 72391 37 100.0 36 ..................................... CCAGCCTTTTTTGTCTACATCATATACCATTTTATT 72464 37 100.0 39 ..................................... AATCAAGATGAGCATGTTTGCTCACATATGTTATTTTTT 72540 37 100.0 40 ..................................... TTGATTCGGGATACTATTTCCATAATTTTTTGATACCATA 72617 37 100.0 36 ..................................... AGACTATTCCCTAAGTTATACTTTTAATACTTGGTA 72690 37 100.0 41 ..................................... TTCTTCTTATCTATTTGGTCCCAGTGGTCATATAACCATTT 72768 37 100.0 40 ..................................... CTAGCTGTTTTCTCACGAAGCTCTTTTGCTTTCTTATTAT 72845 37 100.0 42 ..................................... AAATAAAAGATATTGGTGGGGTTCGCCTCACCTTTATTTTTT 72924 37 100.0 37 ..................................... GCTCCACTCAATATCTTTCCATAGTCACCAATCCACA 72998 37 100.0 43 ..................................... ATAGAATGATGGTTGCTAATGCTACTGGATGTTCATCAATTTA 73078 37 100.0 40 ..................................... CTTAATGAGCTTATAAACTCGTCTAATCTCTTTATAAGAT 73155 37 100.0 35 ..................................... TTTTAGGATCAAAATCTTCAAGTGCTTCTATTCTT 73227 37 100.0 34 ..................................... TCGAATGATAACGTCTTAGGAGATGAAGTATACT 73298 37 100.0 39 ..................................... AAAGGTAATAGACCCTATTGCTGGAGTATTTAAAAAGAT 73374 37 100.0 41 ..................................... CTTTCTTCATCATTATTAAGACTATATGTCCAAATTCCACT 73452 37 100.0 37 ..................................... TTACATTTTCTTTTACTGCCATTTTATTACCTCCTAA 73526 37 100.0 41 ..................................... TACATATATCATCTAATTCTTCTTCTTTGTGTGAGAATATT 73604 37 100.0 38 ..................................... TTAAGTATTCTCCCGAATGTAATACCTGAACCACTAAC 73679 37 100.0 37 ..................................... TGCTCTTAGTTCTCCTTTAAGACCTAAGAATACTTGG 73753 37 100.0 35 ..................................... AGGTTTATTTGTCCCGTAAATAAATTACTATTATA 73825 37 100.0 39 ..................................... TTTTCTATGTTCCTAGATACATCTGTTACGAACACCAAA 73901 37 100.0 38 ..................................... AGAAATTTGTAATGATGGATTGGAATATTTAATATTTA 73976 37 100.0 43 ..................................... TTCTATGAGCTATAAATCCTCTATATAACCCAGTATCTAGATA 74056 37 100.0 40 ..................................... AAAAGCATCAAAACTATAATGAAGCTGATATAGTGGTAGG 74133 37 100.0 42 ..................................... TTATTCCTTATATGAAATGATGATAAATTAGATACAACTCCC 74212 37 100.0 35 ..................................... ACTTTATTAAATCTCTTATAAGATGCTCTATAAAA 74284 37 100.0 43 ..................................... TTAAAGGCTTGTTTCCACTTCCTTTTCTTTGCCTTGCTAGTAA 74364 37 100.0 38 ..................................... TAGTTTATATAGATTTAGGAATATTTAATCCTATTTCA 74439 37 100.0 35 ..................................... CTTTATCAACTCTTCCCATAAGTTCTACCATTTCT 74511 37 100.0 39 ..................................... TGTGCTAACCACCACTGCTGTAGGAGTTGTCTTTTTAGA 74587 37 100.0 35 ..................................... TTCATCATTCTTTTATGTAATTTTTTAACCTCTTA 74659 37 100.0 38 ..................................... TTCTATTGGAGAATTAATTGATAGAACAACAAAAGAAA 74734 37 100.0 37 ..................................... GACATATTAGCAGGAGTTGGTGCTCCTTGGAAACCGA 74808 37 100.0 36 ..................................... TCTTCTACCGCTTCTCTAAAGTTTTCTTCTATGAAA 74881 37 100.0 40 ..................................... TACAATCAGAAGACCATGTTGTAAGAAGATATAAGTATTA 74958 37 100.0 35 ..................................... ATAGACTGATACTGCTAATTCTTTAGATACCCCAT 75030 37 100.0 37 ..................................... CATTCCAGTAAAAACACCTAAAGTTTTCATATTTTAC 75104 37 100.0 41 ..................................... CCACTTGCAATTTAAATAATTTAAAAATCTTTTCAACAGAT 75182 37 100.0 41 ..................................... TTTAGTTTCTCCTGTTGCAGTTGGAACCTCTTTTTTATCAG 75260 37 100.0 39 ..................................... CTTTAGCACTTTCTATGTGATGGTCAGGTTTTCCATCTT 75336 37 100.0 39 ..................................... CAAAAATAATGTTTCTCATCAGAATAAGGCTGTTTAACA 75412 37 100.0 40 ..................................... AACTGCTATTGCTACTTTTGCTCCAACCTTACTTGCGTCG 75489 37 100.0 35 ..................................... ATAACTTAGACTAATATTAGTATGATTTTAGTTAA 75561 37 100.0 38 ..................................... TTAAATCTCGTAAAATCTATAATATCCTCTTTAAAATA 75636 37 100.0 35 ..................................... TTTGAGCTATTCTTTTAACCCAAGTTTCATCTTTA 75708 37 100.0 45 ..................................... TAACTAATAGCAAGACTCTTTAATCTCGCTATAAGCTTATCCTTA 75790 37 100.0 35 ..................................... CTCCTATGAGTTTATCAGAGTTTAATAAAAATGAA 75862 37 100.0 42 ..................................... TGCTCGGGACTTATTATTAATATTCAGTTATAAAGTCTAGGT 75941 37 100.0 42 ..................................... ATGTCTACATAAGTTTCAGGATTAAGCTGAGCCCAAGCTTTC 76020 37 100.0 36 ..................................... TACATTTAAGTTACCGAATGATCTAACTCTATTTTT 76093 37 100.0 35 ..................................... GGTTTTTCTAAGTTCTTAGCATTTTCTTCAATTCT 76165 37 100.0 44 ..................................... TTGTTCAGAAAGACTTTTTCTATCAAAAGTACCCTCTTTACAAA 76246 37 100.0 34 ..................................... CTAAAATGTTAGATTTTATAATTTAAAACTAGAT 76317 37 100.0 41 ..................................... ATAGAGGGTAAGATGGCTCAAGGACAAAGAGTTATACCGGG 76395 37 100.0 38 ..................................... TCTTGATCACTATCAAATCTCCATTTGTCTATATTTGT 76470 37 97.3 38 ............G........................ TGCAATGGGACACCCAAAAATAATGAATAATATTCAAA 76545 37 100.0 37 ..................................... TTCTTCATCAATCCATTTTAATTCTTTTATTTTACCT 76619 37 97.3 39 ............G........................ CTAAACTTATGTCAGTTAATCTGAACAATCCAGTATTAG 76695 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ============================================= ================== 59 37 99.9 39 GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Left flank : ATAAAAAAAGTATTCTTTTTTCTCCCAATAGCTGTCCCTTGAGTTGAAATGTATAGATCCATAGATATTTCCCCCTATATTAAAAAATTTTTTAAATGAAAAATGTAATAAATATGGTTAAAATAGTTTAAAATGATAAAAAAATAATTATATATTATATATTAACATATATATTAAAAATAAAATAGAAAAACTTTAATAAAATAAATATTCTTTTAGAAAAAAATATTTACAAATTTATAAATATGTAGTATAATATAATAAATATAAAAACATTAGTGTAGAAAAAAGAGTATAAGGTCAATTTTTTAACATTTTATTTTTTTGTTTGTATTAAAAATTAAAATGCTCACTATTTTAAAAAGTTAAGAAAAAACAATAATAAATTTTTAGTACAAAACAGTTAAAATCCTCAAAATACGGAAAAATGTTCAATTTTTGCTACCATATAAAAAAGACTTCTTTCCACCATAAATACACCATCTATCCCTTTGGTAAGG # Right flank : TTTTTGAACTCCTATTATTGTATTAAAATTAATACAAATAAGAGTTTTTTTATGGTTGTTTTATTGCAAAGAATATATAAATTGTTATATAATGAGATATATAATTATTGGAGGTGGAGAGAAATGATTTCATTTGGTAAAAATATTCAAAACAGAAGAATTGCACTAGGTTTAGATGTTAGTGAATTAGCACAACTTGCAAATTATGCAAATAAAAGCTATATAGAAAGGATAGAAGATGAGAAAATGTATCCATCTGCTAAAAAACTTCCAGATTTAGCAAAAGCTTTATCTTGGAAAATAGATGACCTATTTAAAAATGTTGAACTTGAAGAAATTGAAACAGAATATACTTTAATACAAAATGCAATAAGGTTTATAAAATCACTAGATAAAAAAAAATCTCTTTAAAAACAATCACTCTTTCAATAGATACATATAAAAAATATTATGCTTGTTTATTTAATAAATATATTAGAGAAAATTTTTTAAATAAGGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //