Array 1 446608-447735 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHCF010000003.1 Klebsiella grimontii strain 4928STDY7387685, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 446608 29 100.0 32 ............................. ATTAGGGGTAAAATGGGATGCCACCATCTCAT 446669 29 96.6 32 ............................T CGCTCTCTTCGGTCTGATCCGCATGGTCGATC 446730 29 100.0 32 ............................. CTACCGCCCTGGCCATTACTGAGCATAGTAAC 446791 29 100.0 32 ............................. GCACGGCGCGAAGCGCGATCAGCTGACCAGCT 446852 29 100.0 32 ............................. CTGTGACGTTACCTCCTCGGTGTCGTAGTCCG 446913 29 100.0 32 ............................. TGTGCGAGGGCCGGTGCGATTTGACCGGATTC 446974 29 100.0 32 ............................. AAACATGGCTGACCGCTGCTGAGTGTGTCGCG 447035 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 447096 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 447157 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 447218 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 447279 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 447340 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 447401 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 447463 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 447524 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 447585 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 447646 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 447707 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 204936-202831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHCF010000004.1 Klebsiella grimontii strain 4928STDY7387685, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 204935 29 100.0 32 ............................. TAGGGATTATTGTTTGTCTGTATGCCTACAGT 204874 29 100.0 32 ............................. CACTTTACTAACTTCCTTCAGCGTTACTTCGA 204813 29 100.0 32 ............................. AGGGTGTACAGGCTTTCAAAGATTATCAGGAT 204752 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 204691 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 204630 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 204569 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 204508 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 204447 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 204386 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 204325 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 204264 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 204203 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 204142 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 204081 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 204020 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 203959 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 203898 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 203837 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 203776 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 203714 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 203653 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 203592 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 203531 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 203470 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 203409 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 203348 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 203287 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 203226 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 203165 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 203104 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 203043 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 202982 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 202921 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 202859 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //