Array 1 2137245-2136240 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043043.1 Gluconobacter thailandicus strain HD924 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2137244 29 100.0 32 ............................. CGCATCTCTGTCGCGGGTGGCCTGATAGCCAG 2137183 29 100.0 32 ............................. ACCCAGAACACGGAACAGAACGTGCGGACGCG 2137122 29 100.0 32 ............................. AACTGGCTGGCCATTAGCATCAACACCAGATA 2137061 29 100.0 32 ............................. AACCCCATACATTTCATCGCCGCCGTTTCCAC 2137000 29 100.0 32 ............................. GTGGATTTCACCTTTGGCCCGCAGGTCAAATA 2136939 29 100.0 32 ............................. GTTGGCAGAGAGACGTTTCATATCCGCCCGGA 2136878 29 100.0 32 ............................. GCCATGAAAAACACCATCTGGGCTGCAAATAC 2136817 29 100.0 32 ............................. CTGAATATCTGGGGCGAGATCGATCCGGATAT 2136756 29 100.0 32 ............................. CACTTGCTCCCGCTACGCTGGAGAGTGCGCTC 2136695 29 100.0 32 ............................. ACGCGCGACCTGAACCAAAACATGAACGCCGC 2136634 29 100.0 32 ............................. AACGTCAGGGGCTACCAGACGGACCTACGAAA 2136573 29 100.0 32 ............................. GCTGTTGTGCGGCTTGATCCGGATAACCTTCA 2136512 29 100.0 32 ............................. AGGGCGTCCGCGATGGCAAAGCCACGCGCAAG 2136451 29 100.0 32 ............................. CCGTTGGTGCCGTACAGCGCCCAGTCCCGCTC 2136390 29 100.0 32 ............................. ACGACTGCCCAGGAAGCGCTTTTGTCTTCCTA 2136329 29 100.0 32 ............................. TTGGCCGCGACATGCGCCAGTCCCGCGAGATC 2136268 29 89.7 0 .......................A..T.T | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGCCTCGTCCCCATGATCGAAGATGTTCTCTCCGCAGGAGGCCTGTCACCCCCTGAAGCACCGGAAGAGGCCATGCCCGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGGTCATCGTGGTTGAAAACGCCCCACCACGACTGCGAGGGCGGCTCGCCGTCTGGCTGCTGGAGATCCGCGCAGGAGTATATGTCGGTACCTATGGCCGAAAAGTACGCGAGATGATCTGGCAGCAGGTCTGCGCCTATATTGAACAGGGAAACGCTGTCATCGCATGGGCTGCTCCCAATGACGCAGGCTTCGAGTTCGACACCTGCGGCGCCAACAGACGATGCCCCGTGGACCTTGATGGATTTCGTCTGGTCGAGTTCGGTCCAGAAGCTGCCCTCCCCCTCCTGCCCGGCCCCCTCAATTCACCACGAAACCGACGCTGAAAAATCGGTAGCTTTTTGAAGTGGAAGATTTGCACCCATAATCATATACTTACAAACAAGG # Right flank : TTACCGTCAGGCGTCTGAGCCCTGCACAACCGCACTCATTCTCCCCACATTCTTGCACACAAGGAGACAGATCATGAGCAAGCTCAGTAAAGAGGAACGGGACAGCCTGCCTGACAGTGAATTCGGGCTTCCTGAAAAACGGGCCTATCCCGTCGATACAAAGGCCAGGGCCCGGAATGCAAAAGCTCGTGCCACGCAGGAGCTGGAACGGGGGCTGCTGACACAGGAAGAACGGGATGAGATTGACCGGGCAGCAGATCGTAAACTGAACGAAGACTAAGCCAGAATCAGAAACGGCCCCGGATCACTCCGAGGCCGTTTCATCATTCAATTCCGCAGTCAGTGAGCCTGTGCTGCCCGCAATGGAGCATCTGCCGGAACATCCTTGAGCGGGATTCCCTGATACTTACCCGTCAGGGTTTTCAGGAACGCAACGATGTCTGCAACATCCTGGTCAGTAATATCATGATCCGGCGTTTCGTAACGCGCCATGGCACGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2211687-2211044 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043043.1 Gluconobacter thailandicus strain HD924 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 2211686 29 100.0 32 ............................. GCCCAGTACTCTATGTCCGTTGCGACATCGCC 2211625 29 100.0 32 ............................. GCTCGGCAACGATCTCCAACATTCTCGATGAA 2211564 29 100.0 32 ............................. AAAAAAAGTTCAATAAATTATACAGACGGGTT 2211503 29 100.0 32 ............................. TCGCCAACGAGCTACGGCTTGCTGACGATGCC 2211442 29 100.0 32 ............................. GTGTCCGTCTGCTGTGCGTTGGCGCGCTTTAA 2211381 29 100.0 32 ............................. GCAACTCAGGGTGATCTTGAAAAGGCGCTGGA 2211320 29 100.0 32 ............................. TTCGACGCGGACCGCGTAACGTCTGATATTCA 2211259 29 100.0 32 ............................. CCATTGCGCTCCATTGGGATGCCTGGGCTTCT 2211198 29 100.0 32 ............................. TTGGCGGCCCCATAGGCAGAGCGGACCAGACC 2211137 29 89.7 35 ......................C...GG. ACTACTGGTGGCCGTAACTTCGATCTCGCCAAATA 2211073 29 72.4 0 ..CC..G....T..G...T....CT.... | T [2211064] ========== ====== ====== ====== ============================= =================================== ================== 11 29 96.6 32 GTGTTCCCCGCATGTGCGGGGATGAACCG # Left flank : TCGGGAACTGCGCGTTCCGTTCCGGACGGCTCATCATGTCACGGGGCGTCTGGTCGGACTGGCCGAGCAGCGCGGTTGTGATCTGGCGGATCTGTCCCTTGAGGACATGCAGGCCGTGGAGCCGGGGATCAATGCTGGTATTTTCGATGTTCTGACGGTTGAATCCTCACTGGCTTCCCGCACCAGTCTGGGTGGAACTGCTCCGTCCAACGTGCGCCAGCAGGCTCAGGCCTGGCTGGAGAAACTTGGAGACGCTGCATGAAACGTTTTCTGCTTGTTGGCCTGACCCTCGTAGCGCTCAGCACTGGCCTGAGCGCCTGCGGGAAGAAAGGGGCTCCACACGCACCCGGCCCTGCTTCCGACATCACATATCCCCGGAGTTATCCGCCTGAATAACGGGCTTTCAGATAAGTCTTACGGGGGCCGAAAACAGGCCATGAAAATCGGTAGATTTTTGAGAGTGGAATTTTCCCTTTTCTGTCAGTACCTTGCCAGGAAGA # Right flank : GAAGAAGCGATTCCACTTTCTTCAGCCTCAGCGTTTTTCTGAAAACTTTACAGATGCAACAGCCGCCATCAGCTGTCCGCCAGAGCCTTGACTACCAGCGGGTGTGTCAGAACGTCCTCTGCAGGCCAGCCCATCGCCCTGAGCGCTCGAACCCCTTCTGCACCATCCCTTTTGGAAAGCTTCTTTCCGCTCTCATCCAGAATAAGAGCGTGATGCCTGTACTCAGGTTCAGGCCATTTCATCAGGGTCTGAATTACACGATGAATGGATGTCGCAGTGTAAAGGTCCTGCCCTCTCGTGATGCAGGTCACGCCCTGAAGGGCATCATCGTGGGTGACGCACAGATGATATGATACGCCCGTATCTCTGCGTCCCAGAACAATATCGCCAAATTCATCCGCACGCCCCGCAATCCGACCATGACCCGCTTCATACCAGGACGGCACACCGTGGATTTCGTTCAGAGCGCGCTGCATATCGAGCCGCCATGCCGGCGCACG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3193434-3192916 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043043.1 Gluconobacter thailandicus strain HD924 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3193433 29 100.0 32 ............................. TGGACGGAGCGTTCGGAACGGGCGGTGTAGCT 3193372 29 100.0 32 ............................. GTGATGCGGGGTTCTGGCGTGGGTGCGGGGGC 3193311 29 100.0 32 ............................. GTATGCGATGGAACAGAATCTGGTTCTTCCAG 3193250 29 100.0 33 ............................. ACAGCTTCAAAACGGGCGATGTTCCAGAGGTGC 3193188 29 100.0 32 ............................. CTGGGCACCGAAAGCACCGGCTGACGTCCTGG 3193127 29 100.0 32 ............................. GAAAACTGTGGCTTTGGGTATCAGAACCGCAT 3193066 29 100.0 32 ............................. GCCGGGGGGCAACATGCCCTCGCCCGTCTGCG 3193005 29 100.0 32 ............................. GCGCATGCCGTGGGATCGGGAAAAACCTTCTC 3192944 29 89.7 0 ...........GT............G... | ========== ====== ====== ====== ============================= ================================= ================== 9 29 98.9 32 GTGTTCCCCGCACGTGCGGGGATGAACCG # Left flank : GCCGTTCCCGGTTATACCGAAGCGCGGCCTCCTGCAGCACGCGGATCATGGGAATCATGGGGCTGCCCATATCTCTGATGCCAGCGAGTTCACGGTTGCTGGCGGAAAGCAGGGCCGCCAGCGAACCGAAGCGTTCCAGAAGCGCCGGGACAAGACTTTCGGCTTTTTGTCCACGACCCGTAAAAAGATGGACGATCAGCCTCAGAAGTATGTCGTCGCTCAGATGACGCCCTCGCCCACTCAGGAGTGCAACAGGAGCAGGAATCGTTTCGTGATCCGCTGTCTCCGGCGCGGCTGTAGCTGGTATGGCCTGAAGGAAGGGACTTCCCAGACAGTCAGAAAATCCATCTTCAGAAGGCTGAGCGTTGGTCATTCGTTTTTCTGGCACTGTAACCCGGACGAGATCAAGGCGTCGTCAGCCTCTCTCGGAAAGGTTGAAAAAATCGGTAGATTTTTCGGGGGCTGTTTTTCTGTTGGAAAACAGTTATCTAACAGGAAGA # Right flank : GGCTCAGGAAAACGCCAGCTTTCTTGCATTTTATGTTCCCTGCAAACGCAGGATTGTTTTTGAAGCAGGGTGTGAGGCTTAAAGGAGACCTTCCTGGCGTAGGCTGCTGAGTTTTTTGTATTCAGTGCTTAGAAGGACGTCATGCAAGACGATGGAAAGTGGCTTAAGTGCGGTTTCCAGAGTTCTTGCAGCCGTTGACAGGGCTGGTGATCTGAGAGCGGGTTGGACATGCAGGCCGATAATGGCGGTAGCATGTAGCGCCAGTGCGCGAATGGCGATGGCGCGGTTCAGGAAGGTGATATCCTCCTCTTCGGGGGCCGCTTCATCCGCAAGGAGGCGGTTGCGGTTATCCAGATAAAGGATGCGAAGCTGCCCGGGAACCGCGCCTTGTAATGTCGTTTCAAGATAGCTTGTCAGTTGTGGCCAGTTCCCCAGAACCGGACGCTCGCGGCTTTCGGCGGAGGCAAGACGTTCTGCGGCGACTGACGGAAGGCGAAGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //