Array 1 1035545-1030624 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064789.1 Halapricum desulfuricans strain HSR-Bgl chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1035544 37 100.0 36 ..................................... TACCACCGCGCGAACTCGTCGACGAAGTCCTCAAAC 1035471 37 100.0 38 ..................................... AAACAAAGACGAACACGTTCGAATACGGTTATTGTGAT 1035396 37 100.0 37 ..................................... TAGGGCCCGTCTTGCGTGACTGGATAGCGGACGCCGT 1035322 37 100.0 36 ..................................... GCAAATTGCCCGGCGTCAACTGCTGTCGATCCAACT 1035249 37 100.0 36 ..................................... ACTGACTTTGATCGGACGAGAGGTCGACTGAAGACC 1035176 37 100.0 37 ..................................... TGGACGATGCTGAGTTTGATGTTGGCGATGGAGTGAC 1035102 37 100.0 36 ..................................... GATTTCAACCTCAACACTATCGCCCCATGCCTTGCC 1035029 37 100.0 34 ..................................... CAGTGATCATGCTCGCGGTCGGAGGCGCTGCCGC 1034958 37 100.0 37 ..................................... ATATCGACTCGATCAAAGACGAACTCGAAGCGGCAAA 1034884 37 100.0 36 ..................................... TTGAGTTGTTCCGGGGTGAAGTCATCGAGCGTTGTT 1034811 37 100.0 37 ..................................... TGCTTGTTGCCTCTTTCGCTCCCGGTAGTAGTCTATC 1034737 37 100.0 33 ..................................... TGACAGCCACGCTTGAAGAGGGTGTTCGCTACC 1034667 37 100.0 35 ..................................... AGACCGGCGATGCACAGTACCGGACGCAGATCGAT 1034595 37 100.0 36 ..................................... TTGTTGATCGTCCGGGAGTTCCAGCAAGTCAGTCAC 1034522 37 100.0 36 ..................................... GGTACGTCCTTGCACCGATACTATTGCCTCTGGGAT 1034449 37 100.0 35 ..................................... TGGCTGGTGAGGTTGGTATCTCCCCACCGACAGCT 1034377 37 100.0 37 ..................................... TTCGCCTCCACGACTTGCGTTGTCCATGCGGAGATGT 1034303 37 100.0 36 ..................................... TTGCCGCCGTTGTAACTGGTACTGCTGGCCCACGTC 1034230 37 100.0 34 ..................................... GGGTTGATCGGAGCCAGCTTGAGCGGCCCCGGAG 1034159 37 100.0 36 ..................................... ATGTTGCGACGGTTGAAGACATCGCAGACCTTGCAG 1034086 37 100.0 35 ..................................... ACTGAGAACGTCTCGGTGATCGCGAGATCGGGCAC 1034014 37 100.0 34 ..................................... ACCCCGAGTCCGAGGACAACCCCTACGAAGTCCG 1033943 37 100.0 36 ..................................... ACCTGCCATCCAGATCCGGCGAAGTGGGTCGCTCTG 1033870 37 100.0 36 ..................................... ATATATGGGGCCTTGATACCGTTGTCTATCCAAACG 1033797 37 100.0 35 ..................................... GAGTTACTTCGACCCCGACGAGCACGGCAACACCG 1033725 37 100.0 39 ..................................... CACAGTCGCTCACCCTCTCGGAGTCTCCGATCTTCAACC 1033649 37 100.0 37 ..................................... TGATCGCCCGTTTCACCAACCGTCGAGCGGGCCGCCG 1033575 37 100.0 35 ..................................... AAAAAACTGTCGAGATGCGACATCTCCGCCGACTG 1033503 37 100.0 36 ..................................... CTGTATCGACAGGGGTTGATCGACGATGTCTGACCA 1033430 37 100.0 34 ..................................... TCTCCCTCTTCAACGCTCGTGGTACTGACGACGG 1033359 37 100.0 34 ..................................... GCCCCGTCGCGATCGCCGGCCGCGAGCGCGTCGT 1033288 37 97.3 34 ................................A.... AAAATCGCACGGAAACGAAACGACGTATTGAAAG 1033217 37 100.0 36 ..................................... GGCTGGTCGCTCTGTCTTGTAATATATCGCGTTCTG 1033144 37 100.0 35 ..................................... ACGGTGTGAGCATCCTACCCCTGCCGTCCGCGGTA 1033072 37 100.0 36 ..................................... CGTGCCTGCCCAGCTCGCTCTGCCCGCTGGGCAACC 1032999 37 100.0 36 ..................................... GGATCCCCGACAAAGTAGCTCTGAGCGATTGCTTTT 1032926 37 100.0 35 ..................................... GCGACGAGGGGATTGCGTGGGCCGGGAACAAACTG 1032854 37 100.0 36 ..................................... GACACGGATGTCGTCGCCGGTCGCGCGGTAGTGACG 1032781 37 100.0 34 ..................................... GTGTCGGTCGCTCGGCAAGCAGATGCAATACCCG 1032710 37 100.0 34 ..................................... ACGAACGCTTCCTCAGTCTCGCCGAACTCATCAA 1032639 37 100.0 34 ..................................... AGGAAGAACCGACCTGTCTCTGCGTACACGATCC 1032568 37 100.0 36 ..................................... GAAGCCCCAGAGGCCGCCGAACAGCGTCGAAGCCAG 1032495 37 100.0 36 ..................................... TGACCGACGACCTCGTGAGTCAACTGCCGCCGGCGA 1032422 37 100.0 35 ..................................... GCGCCTGATGAACTCGGGCTTCAGGAAGCGCGGCG 1032350 37 100.0 37 ..................................... GGGGCCGTGTCGCCCTTCGAGGTCGCCCGGGTCGCGG 1032276 37 100.0 35 ..................................... TCTGTCGTCGTCGGTGGGCTATCTTCATAGATGAG 1032204 37 100.0 35 ..................................... GCGTTGAGTAATCGAACAGGCGAATCGAAGCGACA 1032132 37 100.0 36 ..................................... TAGAAGAGGATTGCCAGTATCGCCATGCCGAGAATC 1032059 37 100.0 37 ..................................... AGCACCTCGTCCACGTCCGTCGTCCACGTCCCCGCTC 1031985 37 100.0 37 ..................................... TCGGCAAGCCTCACAGCAGCAGCGGCGATCGGGACGT 1031911 37 100.0 45 ..................................... AGGCCGGCCTTGACCAGCCCCCGGAACTCGTCGCGACGATCGAGG 1031829 37 100.0 36 ..................................... AATTTGACTAGTTCGCTCATCTTCACGTCGCCCACC 1031756 37 100.0 36 ..................................... CGGATTACAGCGAGCCAGTCACGTCCGTCTCGGACG 1031683 37 100.0 38 ..................................... GTCAGGGGCGCGAAGCCTGAACTCGACCATCCGCTCGT 1031608 37 100.0 34 ..................................... TTGCCTTCATCGTGCTGATCCTGTCGGTCATCAT 1031537 37 100.0 36 ..................................... ACATCTGTCCATCCCCCGCCCGTTGGGACTGTCGAA 1031464 37 100.0 35 ..................................... TGGGTCTTCGAGCCAGTGGCAACGTGTTTGAATCG 1031392 37 100.0 36 ..................................... TTAGAATGACCACAACACCAACCGAACACGAACACA 1031319 37 100.0 37 ..................................... ACGAGCGGCGAGAAGACAAGCAACAACCCGCCAAGAA 1031245 37 100.0 36 ..................................... ACGATGATAGGACGATCGGCCCAGGCAGGTCAACGC 1031172 37 100.0 36 ..................................... ATACGATAGCCGTCCTCGTTGTCGGCCGCGTCCGTC 1031099 37 100.0 37 ..................................... TGTCGTCGACGGCCGCCTTGACCGTGAGGCTGCGGAG 1031025 37 100.0 37 ..................................... GGGTCTACGAAACGGATAATGGAACGAAGTACGAAGT 1030951 37 100.0 36 ..................................... AGCTCCTGGAGACGAATACGCTGTATCTCCGGACGA 1030878 37 100.0 35 ..................................... CTGAAAATCGCGACGATCCAGAACCCCAGCAGATA 1030806 37 100.0 35 ..................................... AGACTAAGGCGGCCTGTCTAGTCGAGAAATCCGAC 1030734 37 100.0 37 ..................................... GACTCATCGTCAGCAGCGTCGGCTGTGTGTCGATTGG 1030660 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 68 37 100.0 36 GTCGCAGCAGGGAGAAAACCCACGACGGGATTGAAAC # Left flank : CGATCGTGTCCCTTGGTGGTGGTGCGCGAGACATTTTGCTCCCGCTGACGATCGCGTCGCTCGTTTTTTCACACCGTGTCGATCAGGCGCTGTTTTTCAGTGATATCGACCAGGACGTCCGCCCACTGTCGCTACCGGAGCTGACCGCGCGAGTGCCCGAGCGCACGCAGGAAACATTTGAATCGATCGTCACCGGCGACGGGTGGCAGACGCTCACGGGGATTGCCGACGGGACCGGCCAATCAAAGAGCACCGTCATTCGACATGTCAATGCTCTCGAAGAGGCCGAAGTCGTCGAGGCGGACACGAGTGAAAAAGCCAAGCAAGTCAGGGTTTCGTTCTCGGGTGAGCTACTATCGAAGGCCTGGTCGTTGCAGACCTGAGTCGATATCTTCGTGGACCTTTTTGAAGTCTCTGTACGGCCCCGGTCGACGAACAGGGGCGCGAAATTCACGAGCGGAGCAAGATTTATGCCCTCTCTGGACGGATTTCGACCCCCT # Right flank : GGATTACCGTCCTCAGCATATGCGCACTGGAAGACGACGTCGACCTGTTCGAGTGAGTCGGCGAAACAACTACAGGGACCAATATACAACGTATACGTATGACCACAACCATCCGAGTTTCCGACGACATCAAAGATCGGCTCGAACGGCTGAAGCGCGACGACGAGACGTTTGACGAGTTGCTCGATCGACTCAGCCGAGATGAAAAGGATATCGAAGCCATCGCTGGCAGTTTCGATCGGCCAGAAGACGAGGGGCTGTCCGAATCCGTCACCCAAACACACGAGGAGCTAAACGAGTCTCTCGAAGATCGAACGGAGCGGTCTGAACAGTGATCGTGCTCGACAGCGACGTTGCGGTGAAATTGCTCCGCGAAGACGATCCGGTGGTGAAATCGCATCTGAGCCAGTACAGCAACGACGCCTGGGCGATCCCGTCGTTGGTCGGCTTCGAGTTCTTCCAGCACTACGAGCGGTTGGATGTCGTTTCTCAGACCCAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCAGGGAGAAAACCCACGACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 1046502-1049013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064789.1 Halapricum desulfuricans strain HSR-Bgl chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1046502 37 100.0 34 ..................................... ACGGCGAGGGCGAACTCCCGGCAGAACTGGCCGA 1046573 37 100.0 35 ..................................... ATGGTGGCTCGACAGGCACCTGCAATACCCGACAG 1046645 37 100.0 36 ..................................... ACGATCCACATCCACACGTCGTGGGCTGACGCTCTC 1046718 37 100.0 36 ..................................... ACGATCCACATCCACACGTCGTGGGCTGACGCTCTC 1046791 37 100.0 36 ..................................... ACCTATACGAACCACAGACCGGTTCACTACAGGTGG 1046864 37 100.0 35 ..................................... TCGAGGATGGCGAGCCAATGCCGAACAGTGATCCA 1046936 37 100.0 37 ..................................... CTGAAGGAAACCACGCGGAACGTCAAGGAGAGTTACG 1047010 37 100.0 37 ..................................... ACGTGATCGGTGCGAAGTACACGTTCAACGGTGACCC 1047084 37 100.0 38 ..................................... TCGGCCAGCGCGACCGCCTGCTGCTCGGCTGCGGCCGT 1047159 37 100.0 33 ..................................... TCGTCGTCGACGACGACTACCTCGACGGCCCGG 1047229 37 100.0 36 ..................................... AGTCGGACGGGGACGCCATCAAGGAAGCGGTTGACG 1047302 37 100.0 35 ..................................... GTCCTGCAGTTCGATCGGCGGCTGACAGACCAACG 1047374 37 100.0 32 ..................................... GCAACGGAGAGACAACCAATGATCGGGAATAT 1047443 37 97.3 36 ...........G......................... GATCCGTGCGAGTGTGCAGGAACACGACTTCGTCGG 1047516 37 97.3 36 ...........G......................... ATTGCTGGCGGGAGTGCATTGCTTGCGGCCGGCGGG 1047589 37 97.3 36 ...........G......................... ACGACGCGCCAGCCGGCCAGTATCGCTGTCGGTACT 1047662 37 97.3 36 ...........G......................... TCGTCTCGCCCTGCTCGCGAACGAACTCGCACATCG 1047735 37 97.3 36 ...........G......................... ATCCCGGTAATGCGGAAGGGATGAAAATTGTAAATG 1047808 37 97.3 38 ...........G......................... TGTTTTTCGTCGTTTTTCATTCTGATGTGATTGTTAAC 1047883 37 97.3 40 ...........G......................... GGTTCGCCGCGGCCGAGGGGCTGGTGTACTCGACGTTCTC 1047960 37 97.3 38 ...........G......................... ACGTACGAGCGCGTGTTGGTCTGGGATATCACGCCAGC 1048035 37 97.3 37 ...........G......................... GGTCCCGTGGGACGGCCCGCCGATCATCTGCTCGCCC 1048109 37 97.3 35 ...........G......................... GGGTCGTCGGTGTACGGCCGGCTGTGCAGCGCCCA 1048181 37 97.3 35 ...........G......................... ACGAGCACGAGGTCGACGCCGAGCTGGCCGCGCAT 1048253 37 97.3 35 ...........G......................... TCGATGATTGCCTCGCCGCTAGACCGGGTGGCGAT 1048325 37 97.3 37 ...........G......................... GGGTCTACGAAACGGATAATGGAACGAAGTACGAAGT 1048399 37 97.3 34 ...........G......................... ACGGCAATCCTGATTGCACTGCTCGTGCAGATTT 1048470 37 97.3 38 ...........G......................... ACACGGATCACCTGATCGGCGCGACGGATCTCTCACAG 1048545 37 97.3 34 ...........G......................... TGATACGCGACCCGGCGCTTGCCTTCGACGCGGT 1048616 37 100.0 34 ..................................... GCGCCATGCACTACGAGGAGCTGGCCGAGGGAGC 1048687 37 100.0 35 ..................................... CTGTCGAAGGCGCTGGCGGGATTGGTCGTCGCGAT 1048759 37 100.0 36 ..................................... ACCTCCGCCTTACCGGCACGGCCACGACGGCGATCT 1048832 37 100.0 36 ..................................... ACGACCTCGCGACCCGGGTGGCGATCCCCGACGCCG 1048905 37 100.0 35 ..................................... ATCCAACATGGACTGATGATGTACGGTCAAATGAT 1048977 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 35 37 98.8 36 GTCGCAGCAGGCAGAAAACCCACGACGGGATTGAAAC # Left flank : ACTTCGAATACACAGTGACACGGCGAAAGGCGGTCCGTCAGCAAGCGATTCTGCTTCGAAAGGCGATTACAGACGAACTCGACGCGTATCACGCACTCACATTCGACCGATAACCATGCGACTCGCTGTCGCCTACGACGTTAGTTCAGATTCGAACCGCCGGCAAGTCTATCGAACGCTCCAGCGATACGGTGCCTGGAAGCAGTACAGCGTCTTCGAACTGGAAGTTAACAAAACCGAGCGCGTGAAACTCGAAGACGAACTCGAGTCGCACATTAATCCTGACGACGGCGATAGGATTCGAGTCTACCGACTGTGCGATTCATGTCTGGATGACATCTCTGACATCGGGGCAGAGCCACCTGACGAACAGTCGAACGTACTGTAGGACTTTCGTGGACCTTTTTGAAGTCTCTGTACAGCCCCGGTCGACGAACGAGGGTTCGAAATTCACGAGCGGAGCAAGATTTATGACCTCTCTGGACGGATTTCGACCCCCT # Right flank : CTTTCTTGGTCACGTTTACCGCGAGTATCGGACTGCGAATAGCCAGTTTCTGAGCCTGTCATAGAATCCATCTCATAGCTTCTCACAGCCCGGATTGTTTCCTTGCTCGTAGTTGGTGATGGCCACGACAACCCGGAGACAGAGCGCAACAAACACTTCTGTTCGTGCGTGGACGCGGCCTCGGGCGCGGACGTGCCCGAGGCCGCAGTCCTTGACTGCGTCGTTGGTTCGTTCGACTCCTGTCCGGTTGTTGTACGTCACATCCAAGATGGATTGTTTCAGCTGCACGTCCTCGCTGTGTTCCTCGATTCGGTCTTCGACCCTGTACTCGATATCTTTCGGGTCGTCAGTGTTTCGCGGGTTGTATGGGGCGATTGGCACGACCCCTGCAGCCAGCAGGTAGTCGTGCCAATCGAGGATATCGTAAGCGTTGTCTCCAAGCATCCAGATCGGTGTGTCGACGGCGAGCGCGTCACGGAGTGGTCAGCGTAACTTCTGAA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCAGGCAGAAAACCCACGACGGGATTGAAAC # Alternate repeat : GTCGCAGCAGGGAGAAAACCCACGACGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //