Array 1 2370020-2377369 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071382.1 Geobacter sp. Jerry-YX chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2370020 29 100.0 32 ............................. TCTCGTCAAAAAATCCGCCGTGCCGTAGAAAA 2370081 29 100.0 32 ............................. GTACCGCTGGAACCCTGAGAGGGTAGGACACC 2370142 29 100.0 32 ............................. GCGGGGCCTACAAGCACAAAGGAATCGCAAAG 2370203 29 96.6 32 ............................C AGAGCGTCCCTACGGACTCCGTGGGTGCTCCA 2370264 29 100.0 32 ............................. GTAGGTTGCCCCTTTACCCACCCTTTTTGTTT 2370325 29 100.0 32 ............................. TTCAAACGGTTTGCCGCAGCGTTTGCATGGGC 2370386 29 100.0 32 ............................. ACCGATGACCAACCGTGACGGCCCGATAGCAT 2370447 29 100.0 32 ............................. CTCAATCAGTCGGGCCGGTGGCGGCATGTACT 2370508 29 100.0 32 ............................. TTATCCACCTTTTAGTGCCGGGGCATTTTGTC 2370569 29 100.0 32 ............................. CGCTGGCAGCGGCCGGCCTGGCGCTGATGAAA 2370630 29 100.0 32 ............................. TGCCCAAACGGATGCATCGGAGACGGATATTT 2370691 29 100.0 32 ............................. TTTCAATTTCAGTGGCCCCCATGTCGGACAGG 2370752 29 100.0 32 ............................. TCAAAAACGGATAACAAAATTATCGGTAAAAT 2370813 29 100.0 32 ............................. TCTGGTTCTGTGGCGTCGAGCAGAGCGGCAAA 2370874 29 100.0 32 ............................. CTCGGTAGTTATGGCCGGTAGATTTACCGTTA 2370935 29 100.0 32 ............................. CGGGACCGGCAAAATACAATAACTATCTTGTA 2370996 29 100.0 32 ............................. AACTGGTTGCTGTAATCGCAGGCGGCGAGGAA 2371057 29 100.0 32 ............................. CCCGATTAATGATTTATTGAACGAGTTAGCGG 2371118 29 100.0 32 ............................. GCTTAAAGTCCGTTGTTTGCGGTACGGTAGCG 2371179 29 100.0 32 ............................. ATGGCTTTGCTGATTTTGCCGACAGCGGTGAA 2371240 29 100.0 32 ............................. TACGATCAGAAGTCAGTCGTGGTGCCGCCGGA 2371301 29 100.0 32 ............................. CCCCGGTCTGCATACTGGCCGAGGATGTGGAT 2371362 29 100.0 32 ............................. AGCCACATCAACCGATGTCGCCCGGATCTCGC 2371423 29 100.0 32 ............................. CTGGAGAGCGTGGATGCCAGGTATAGGGTGCT 2371484 29 100.0 32 ............................. GCATAGGTTTTCCGTCGTCGCAGTATTCACAG 2371545 29 100.0 32 ............................. GTGGTCAGGCCGCCGTCAGCCGGTTCCCGAAA 2371606 29 100.0 32 ............................. GCGGGTGATTATATACAGATGGGGAATCAGTT 2371667 29 100.0 32 ............................. TACCACTGCTGCCAGCGTGACCTTTACCCCCT 2371728 29 100.0 32 ............................. TAGAAAACTCCGCGCAGACCATTAACAGCGTC 2371789 29 100.0 32 ............................. TCGCCTTATCCCCGTGGATCGGGCAGAACCCG 2371850 29 100.0 32 ............................. TTGCCGCCCGGAGCGCCAAAAGTCACCGATGC 2371911 29 100.0 32 ............................. CCGATAAGAATTATGGTTTTAATAAGGTTGAG 2371972 29 100.0 32 ............................. ATGGTAACGACATTTCTTCTGAATGTCCTCCT 2372033 29 100.0 32 ............................. ACCGGAGAAAAATGACACACTTTGAGTAATAA 2372094 29 100.0 32 ............................. GTATTATTATCCTGTCACTGTTGGCGGCTCTT 2372155 29 100.0 32 ............................. CTTTGACTCGTTCGTTTCTGCATTTAATCCAA 2372216 29 100.0 32 ............................. AGGGTCCATTAGTAAACACTCCTGATAATGCG 2372277 29 100.0 32 ............................. AAGACCAAGCCCCCCGAGCGTTTCACTGAAGG 2372338 29 100.0 32 ............................. GCGGCGTTGGTAAAACCACTATTGCGTGTAAC 2372399 29 100.0 32 ............................. TCCACCCTGACATCTCTTCGGCGAAAAGAAAT 2372460 29 100.0 32 ............................. GCGACGTTCCCCCTTCCCTGGGGGAACAGAAC 2372521 29 100.0 32 ............................. GGGTGTTAGGTTTTTACTGTTAATATGTTGGT 2372582 29 100.0 32 ............................. GTTCGCTCCGGAAAGGTCCGCATAGCGAAGGT 2372643 29 100.0 32 ............................. ATGCCGGCATTGACTGGGTTCTCGATGGCCCA 2372704 29 100.0 32 ............................. GCCAGGACCAGGACCAAAGAAAAGGATGTTAT 2372765 29 100.0 33 ............................. AACAGAACCGAACACCTCATAAAGACCTGTTGT 2372827 29 96.6 32 ............................A AATACTATTATTTCTACTTCTCCTTGCCCTGC 2372888 29 100.0 32 ............................. ATGAATATTGTTGATGCCATTGAGCGGCACGT 2372949 29 100.0 33 ............................. CCGCCGCCGCCCCTCCCGGGGGGGGGGGATGTA 2373011 29 100.0 32 ............................. TCAGAGCGATACCGCTCCATTTTATCAGCTGG 2373072 29 100.0 32 ............................. GATAACGAAACCTCGCGCCAAACTAGCAGTTT 2373133 29 100.0 32 ............................. CTCCCGGAAATAGGTCTAGATGAAAAATCCCA 2373194 29 100.0 32 ............................. GCGAATTGAATCTCGGTGGCATGAGCGCCGAT 2373255 29 100.0 32 ............................. GTATCCCTCAACAATATACACACGATCCAATG 2373316 29 100.0 32 ............................. CCGACGAGACACTGGCATCTGACGCCCTATGC 2373377 29 100.0 32 ............................. ATCTCAGATTGACGCAAAAAGAATTTGCCGCA 2373438 29 100.0 32 ............................. AGGCGCACGGTTGCACAATCGACGGGGCAAAG 2373499 29 100.0 32 ............................. CCACCGTAGCGCGTTTACAATGTCCGGTTCGT 2373560 29 100.0 32 ............................. GAGGCGGCGATGAGATCAGACGAGGCAATCGC 2373621 29 100.0 32 ............................. GGTCGTGCCGACCGTGAAAGGAGTAGCCGATG 2373682 29 100.0 32 ............................. TCGCCAGCGGCAGTGATGGTTTTACGGAGATC 2373743 29 100.0 32 ............................. CTGCCACTCGGTCAGATCGCACGGGCTGATAA 2373804 29 96.6 32 ............................T GATCGTTCTGGATGGAAACAACAACGTCTCCC 2373865 29 100.0 32 ............................. ACCGGCACGGGCGAGGTGGTGTACCGGGTGAA 2373926 29 100.0 32 ............................. TTACATTTTATCACTACAAACACCTTTGCGAA 2373987 29 96.6 32 ......T...................... CGGCTACTGTTTACCACGTTTTACCATGCCGA 2374048 29 100.0 32 ............................. GTCGATATCCTTGCTCAGCTCCTCAAGGTCGG 2374109 29 100.0 32 ............................. AGTCGCGTAAATAGGGCGTTTACAGGCGAAAA 2374170 29 100.0 32 ............................. CGGCGCAATCTGAGCCTAGGCCGTTCGGCCTT 2374231 29 100.0 32 ............................. CGACACAAATTGAGCCGATTGTTCGGGACCAA 2374292 29 100.0 32 ............................. GAACAGAGACCATTGACAAGATGGACGAGACC 2374353 29 100.0 32 ............................. GAGTTTTGGCGGGTTTTGCGATGGCCTATTTA 2374414 29 100.0 32 ............................. ACTAACAGCGGCGACACCAGACGACGATCTGG 2374475 29 100.0 32 ............................. TTTGCTTTGATTTCATTCCATGAAGCCTTAAC 2374536 29 100.0 32 ............................. CGGCTCTTGTCCTCTATCCACCGCTTCTGGTA 2374597 29 100.0 32 ............................. TTGTGGAGGCAATATAGCCATGATATGGGAAC 2374658 29 100.0 32 ............................. TCTGTCCACCCGGCGGGGTATCCCATAAGCCA 2374719 29 100.0 32 ............................. AGGCCGACTGCCTCAAGCCGCGCTTCCATTTC 2374780 29 100.0 32 ............................. ATCGGATGGAAAAAGTATCGTTGAGCATGGAG 2374841 29 100.0 32 ............................. GGTTCGCACGTCGTCATAAATCGGCACTCCTG 2374902 29 100.0 32 ............................. TATCGCGGCAATGTGGACCTTGCCCCGGTCGA 2374963 29 100.0 32 ............................. CACTCGCCAAGGTGGAGGGGCTTTTCAAAAAT 2375024 29 100.0 32 ............................. CCCTGGAGATTCCCGCCTCGCCCGATGCCCTT 2375085 29 100.0 32 ............................. GCCAACGGACAATGGCAAGTCACTGGGTGTAC 2375146 29 100.0 32 ............................. CCGGTACGGTACGACCGTGCCGGGGAGTGCCC 2375207 29 100.0 32 ............................. CGCGCCCTTCGAGGTAGACAGTTTGCCCGTAT 2375268 29 100.0 32 ............................. GACGTACTCGACAAAGTGCTTTCCTCCGACCC 2375329 29 100.0 32 ............................. GCGTAGAGCATGGACGATCTGGCGGCAGTAAA 2375390 29 100.0 32 ............................. AAAAAAGATGGTGGGGATAAACCTGACGAAAT 2375451 29 100.0 32 ............................. ATAAAACGGGGGCGTAAATGGACCGCGCTAAA 2375512 29 100.0 32 ............................. CGCACTCTCCCCGCTAGTGTACGGGATAAACA 2375573 29 100.0 32 ............................. GCTAAAGCAAGGCTGCGCCAAATTAACCTTAA 2375634 29 100.0 32 ............................. CAATCGCAATATGTCGGCCCGGCGTCGGTAAC 2375695 29 100.0 32 ............................. CCGGTCGGCCTAAAAACGACAATGAACGCAAA 2375756 29 100.0 32 ............................. GAATCTACAAAGTTCAGCCACTTTTTGTTTAG 2375817 29 96.6 31 ....................A........ AGGGCTTGATTAACTATGAACCCGGTTGGAG 2375877 29 100.0 32 ............................. GTAGTCACCGTCGGGCAGTGCCTTGGCGATGT 2375938 29 100.0 32 ............................. CCGCGGCGCTGGGACTGGATCGACCCGCTCAA 2375999 29 100.0 32 ............................. GGAGTAGGCAATGAATTATCAAGAGGTGTGCA 2376060 29 100.0 32 ............................. ACATTGGAAATAGAATTTGAAACTGACGAGGA 2376121 29 100.0 32 ............................. TCGGTGAGGCTGCCGGTATCACACCATACTCC 2376182 29 100.0 32 ............................. ATTAGGCATCACACATCACAATTCGGACGATA 2376243 29 100.0 32 ............................. AGCTCAGATTGACGCAAAAAGAATTTGCCGCA 2376304 29 100.0 32 ............................. CATGGATCGGCCCGGCAGAGCCGCCGAACTCA 2376365 29 100.0 32 ............................. GTGTTCATTGGCGCAGGCGCCGTGCTCACCGG 2376426 29 100.0 32 ............................. CCGACTGGTATTCTGTGCCTCGGTTTCCAGCG 2376487 29 100.0 32 ............................. CCGACTGGTATTCTGTGCCTCGGTTTCCAGCG 2376548 29 100.0 32 ............................. GGGGTGGGCAGGTAGACCGGCATAATGACGAC 2376609 29 100.0 32 ............................. GAACGGGAGCGGCTTCTTGCACAGGCCATGAA 2376670 29 100.0 32 ............................. CCGCACGGGAGGCTCGCGCAGCCGCCAGAGAG 2376731 29 100.0 32 ............................. TCTTGAGGGAATTGGCAATGCAGGAACTGGAC 2376792 29 100.0 32 ............................. GTGGAGTTGACGGTGTAGAGCTTGGCCGAGCC 2376853 29 96.6 32 ............................T ATCAACATTGCGGTTGCAATGATGGTAAGCCC 2376914 29 100.0 32 ............................. CCTGCCGTCCTCGGCCAGCTTTCGGAACTGAT 2376975 29 100.0 32 ............................. AGCATTGATGTTACAACAAGCATGTGGGAATT 2377036 29 100.0 32 ............................. ATAAAAGGGATGGTGTTATGAATTAACTAACT 2377097 29 100.0 32 ............................. GCCGATATGATTTTCGGCACCGTTGAGCTAGT 2377158 29 100.0 32 ............................. ATGAAGAGGAACCACCGCCAATGGTGGTTGAT 2377219 29 100.0 32 ............................. AATGAGCAGAAACCACCCCGGATTGTCATTTA 2377280 29 100.0 32 ............................. AACGACAACGCATACGGAGCCAACGGGCAGAG 2377341 29 93.1 0 ..............T.........G.... | ========== ====== ====== ====== ============================= ================================= ================== 121 29 99.8 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : AAGATTCTGCACCGGATCATTCCCACAATCGAACAAGTGCTAGCTGCCGGCGAGCTTGATGTGCCCAAACCACCGCCAGAATCGGTAGAAGCGGCTATTCCGAACAAGGAGGGGATCGGCGATGCTGGTCATCGTGGTTGAAAACGCGCCGCACAGGCTACGCGGTCGTCTGGCTCTCTGGCTGCTTGAGGTGCGGGCCGGGGTCTACGTGGGCAAAGTCTCTCGCCGAGTGCGAGAGATGATCTGGAACACCGTCGTACAGGGCATCGAAGATGGAAATGCGGTAATGGCTTGGAGCACTAATACTGAGTCGGGGTTCGACTTTCTGACCCTCGGTGCGAACCGGAGGATTCCGCTGGAACTGGATGGTGTGAAATTGGTTTCTTTTCTACCGGAGAATACCGATAAGCAAGCTGTTGAAACTTGACTAGGGGTGTTGAAAAGTTGGTAGCTTTGAGTTCTTTGAAAATTGAATGTAATTTCAAGTAAGTAGAGGAAGT # Right flank : GTAGATGATTTGGCAAAGTAAGGGAAGCGTAGCGCCCGCTCTTCGGGTTGGGCGAGGATTGATATTCTGGTGAACCGGTGCTCGAGATGCAATGCCGGCGTTTCAGGACGGGCAAAGGTAGAAAGAGTCAAGAGGCCGTCGGCTACCGGAGGATAATCCCCCCGATACATACACAGCAGAGGGCGATGAAAAACGTTATTACCGAGATTACGGCAATGGTTCTGGACAGCATGGCGGTGGGCCTCGTAATGCTTTTTCTTTACTAATCGGTGCGGGATTTTAAAACTTTAGTCTGTTTTACGAGTATTTATATTAATTTTGTGGAGGTCGGGAATGGATGTGTTGGAGGCGATTTATGGACGCCGCAGTGTGCGGCATTATGCTGATGAGCCGGTTGCGCAGGAGAATGTTCTGGAAATTATCCGGGCCGGATCATGGGCGCCGTCGGGACTCAATAATCAGCCGTGGCGGTTTGTAGTTGTGCGCGATGGGGAAAATCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //