Array 1 292-18 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ADEU01000005.1 Gardnerella vaginalis 00703C2mash ctg00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	==============================	===============================	==================
       291	    30	  90.0	    31	.A.T.....T....................	TCCCGTCTTTTGTAATTGCCCTTAAAGGCAC	
       230	    30	 100.0	    31	..............................	CAGAATACTTTGTGAATGCTGTAAAAGACTA	
       169	    30	 100.0	    31	..............................	TCCGCTACTTGTCTTTCCGCCTTAAATGGCA	
       108	    30	  93.3	    31	CA............................	GATAGCATCAGCCACGTGTGCAAAAAGCTCG	
        47	    30	 100.0	     0	..............................	|                              	
==========	======	======	======	==============================	===============================	==================
         5	    30	  96.7	    31	TGGGATCACCCCCGCGTATGCGGGAAAGAC	                               	       

# Left flank :   TGATTTAATATAAAATTTATTCTTTATTCATCTGGGGAATGAACTTTACGCGGGACTCCTAAATCATCCGCTATATCGTCATAGTCATCGCCGCATTCATAAGAATCTAGCAAATTATAAGCTTCAATTAGCAACTCTTTAGGTGCACTCTTGTGTAGCCACGCGTCTACTAAATAATAATCAATCGCAATCGATGGTTCGCCTGCTCTAATAGCACTATTGGCTGCTTCTTTAGAGAGCTTATCCATGTTAGGTTCTGCATATGGACGGAGTTTCTCAACCATGTCATAACAAATTTTCATCATATCCATTAGCTTTTCACTCCTCTCTTATTTTCCACAACTGAGAACAAGGTATTAACGCGCCACCCTTTTTTCTTTTCTCGCTCAATCGTTGCAAAAAAACTGAAAAACGTGGGGTGCTCCTCAGACTGATGTTCCAGTCTTGAAAGCTGGTTGCCGAGGTCCCCACGCTGGTTATACTGTATCACAATATTTATA
# Right flank :  CATATCTGGACGGCTTGA

# Questionable array : NO	 Score: 5.90
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGGGATCACCCCCGCGTATGCGGGAAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [2-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [15.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.64   Confidence: LOW] 

# Array family : NA
//


Array 1 37-187 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ADEU01000006.1 Gardnerella vaginalis 00703C2mash ctg00006, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
        37	    29	 100.0	    32	.............................	AGTAAAGATGAGCTTGCTGCGGGCGACTATGA	
        98	    29	 100.0	    32	.............................	GCAAAGCGAGGTGAATAATGAGTGATGAATAT	
       159	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	 100.0	    32	GGGATCACCCCCGCGTATGCGGGAAAGAC	                                	       

# Left flank :   CGTATGATTTTTCAACCTTTTTTACGATTTTGCTAAG
# Right flank :  CACTTAAAATCCCAATAAAAATGGCCATTTCCATAACAGAAACAGTCAAATTTCATTTACTTTTCAAATTCAACCTATCACAGAACATGGTACAACAGTATTTTATTTTTATGAAATAAATTTTAACAATCCTTTCAAATTAAAAACAAGATGCGCTGTTAGTCTAGCGTCCAGAAGAGCTCTATGCGGAACGGATTCAGAAATGTTGTATTCGTGCAGCACCGTCTTTAGCTGGTAATTTTTTAAAAATTTCTTTTCTTTCTTTACAAAACGAGAGATATCAAAAATTTTATTAATTAAAAGAGAATCGTCAAATCTTTCACCTAATGAAGATAAAGCAGAATTCAAAAATGACATATCAAACTGTATATTGTATCCAAGTATCGGTAATTTTCCGATAAAATCAATGAATTCTCTTAATGCTAAATCTAATCCTACACCATAAGACTCAAGCATATTAGTTGTAATACCAGTTAGCTCAATAATTTTATTAGGAATAA

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGGATCACCCCCGCGTATGCGGGAAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-9.80,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.37,0.27   Confidence: LOW] 

# Array family : NA
//