Array 1 60900-61588 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZS01000006.1 Halostagnicola kamekurae strain DSM 22427, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 60900 37 100.0 36 ..................................... CGGCCTCGTTCCCCTCGAGGATCTGTTCGCGGACCT 60973 37 97.3 34 .............G....................... ATCCTCAGCGACGGAACGCAGTTCCAACCGACAC 61044 37 100.0 36 ..................................... AGGTTCGAAAGGGCGATGGGACGGTGCTGTGGTCGA 61117 37 100.0 36 ..................................... TTGCAGTCCTGATTACTGGCCTGTTCGTCGTGACCT 61190 37 100.0 33 ..................................... ACTCCTCGAGCGGTATTGAGCGGCCCGACGAAT 61260 37 100.0 36 ..................................... GATACAGGAGGGTTCGAGACGGCGATCACGGACGAG 61333 37 100.0 35 ..................................... GCCGATCCGCAGACCTTCGTTCTTGAGAGCGGTGA 61405 37 100.0 36 ..................................... AAGAGCAGGTCTACACGCGGAGTACAACCAACGGCT 61478 37 100.0 37 ..................................... ATCCGCGCCGCGTGCAGGAGGGGAGAGTGATGGACTC 61552 37 91.9 0 ....C..G...................A......... | ========== ====== ====== ====== ===================================== ===================================== ================== 10 37 98.9 36 GTCGAAGTGCGGTAGAAACCCAGAACGGGATTGAAAC # Left flank : GCACTTCGAGTACCGCGTGAGCCGTCGAAAAGCGATTCGACAGCAAGTGATTCTCTTGCGGAAAGCGATCACAGGTGAGCTCGATGACTACCACGCACTGGAGGTGTCCCGATGAGACTCGCAGTAACGTACGACGTCAGCGACGACACGAATCGTCGGCGTGTCTACCGGACGCTAGAACGATACGGGGCGTGGCGCCAGTACAGCGTCTTCGAACTTGACGTCTCGAAGAGCGAGCGGGTCGAACTCGAAGACGAACTCGAGGAACACATCGAGCCAGCTGACGGAGATCGAATCCGGCTGTATCGGCTCTGCGAATCCTGCCAAGAGGCGACGACAGATCTCGGAACCGAACCACCGGACGAACAATCCAACGTTATCTGACGTCGGTCTTCGTCGACCTTTTTCAAAGCCGTGTACAGCAGAGGTCCACGAAAGCATCCCGTGTCGTCGTGGGTAGAGCAAGGTTTATAGACCCGCTCGAGCAAAATTCACCCCCT # Right flank : CGCCCCGATCGGAGCGGCCCTCAGTTCGAATCCGGGGCGTCGCAGAAGGGAGAAAACCCACTACGGGATGAAAATAGATCAGAAAAGGACATTATCGATGATTGTTTGGCTATCTAAGGGCCGTGGGGCAGAAGCCTTCTTATAGCGTGATGTTGGGGCTACCGACATCGCTTCCTCGATGGTGATTAGCGAGTGTAACGGAGGGTGTCATAGAAGAGTTCTCACACCGTGATCACGGTACTTGCCGGATTGTCTCCGCGTTCGTAGTTGGTGATTGCGACGACGAGGCGAAGGCACAGCGCAAGAAACACTTGCTCTCGTACGTGGACGCAGCCTCGGGCGTGCGTTCGCCCGAGGCCGCAGTCCTTGACTGATTCGTTGGTTCGTTCGACGCCTGTCCGGCGGTTGTACGTCTCGTCTAGCGTCGATTGCTTCAGTTGAACGTCTTCACTGTGTTCCTCGATGCGGTCTTCGACTCTGTACTTGATGTCTTTCGGATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGTGCGGTAGAAACCCAGAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA // Array 1 6451-6778 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZS01000009.1 Halostagnicola kamekurae strain DSM 22427, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 6451 37 100.0 36 ..................................... GACAAGAGCGGCCAGAGCGACGACGAACGCCGCTTT 6524 37 100.0 36 ..................................... ATCTCCGTGCGATCAACACGGACGTCGACCGCTCCG 6597 37 100.0 34 ..................................... TCGGGCCTGCTCTGGCAGGAGGACCTCGAGGCCC 6668 37 97.3 36 ........................T............ TTGCATCCTGAACGACGCCGGCGTCGATCGGACCGT 6741 36 89.2 0 .....A...................-.A........T | A,G [6762,6774] ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 97.3 36 GTCGCGACGCGGTAGAAACCCGAACTGGGATTGAAAC # Left flank : AGATACTGATTCCCTCCCATGGCAGGAACAACCCCAATCGTACGCGGGGTTGTAGAGCGAGTTCTTGCAGTCCCCTAGGATAACGGACTACATTAATCGACATCAGCGAGGATCCGAAGGGTTACCTAACGCTGCACGGTGGCCGGCAAGGTGTACTTCCGGAACGCCGATCACTCCGCCACACGCGGGCGCTTCGACACACCGATCCGGCTACGACGATCGGTTCAACGAACTTCCCCTGCGTACCTCGTCACGATCGGCTTTGGCGACGAAACCCACGAATCCCGGTGACCGATTGCCTGTTTTTGAACGCTACTGAGTGGTGTGGTACATTCTGAATTGCCACAGTCGTGGTGAACTCGGGCTAGTAAAGAAAGTGTTCTCGGGGTAGGAGAGATCGAATTGGCATCTGCGCTCACCGCTCAAGATCATGGCAATGCACGTTGGGCACTGGGTATACTTCGATCAGCGGGGAGGCTCGCAGAGAAAGATGATGATGT # Right flank : TGGCGCCTTCGGTGCGCTCTCGTGCTTGAGAACGGAAGAACTGCAGATGTCTGACTAGGGTAACCAACACCACCGGCGAATGCGGCCAATTGTTGGCTACTACTCTCCAGACAACCGAAGAACTGCAGTAGACGTGGTTGAAGCAATGGACCGAGAGGTTTTCCCTCGATACGACCAAGATCTGGTATGCCCTTTACCGCGAGCTGGCGGACGCTCCTCGACGAGTGTGAGGAGCTCGCTGCGGATGCAACACTCATCACGCCGCTATCAGAAACACGCTTCCGCATCACCGATGTCCAAGAGCACCGCATCGTCATCGAGTTCGGCAATTCAGGCGACTCTCAGCCGCTGCAACGCGAGCAGTTTGAAACACTCGCCGAGCGCATCACCGACGCTGGCAGCACGTTCGAACTCGAGCGGCTCCCATCAGATGCAGAACCATATGCCGCGGTACTCAGCCTACATCCTCGCTACGAGATCAACGACCAAGCGGGGACACT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGACGCGGTAGAAACCCGAACTGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //