Array 1 1051-824 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVQ01000074.1 Geobacillus thermoleovorans strain RL 964, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1050 30 100.0 36 .............................. TTGGAAATAGTGATAAGGAATTCCGAGACGTTGACA 984 30 96.7 37 ..........C................... TCAGGAGCCTCATTTTCATATCGGGGAACTGGATCAA 917 30 100.0 35 .............................. CGAAAAAAGGCAGTTTTCTGCCGTATAACAACAGC 852 29 86.7 0 ................CA......-..G.. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 95.8 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TATTTGCGGCGATCCGAAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGATGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGTTAAAGCAAGGGATGAAGCAAGGACTCCAACAAGGAATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGGTGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGCCCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCAAAAACCCCTGGGGATCGACGACAATGTTCTTTTGCGCCAAAATCCTACAGCCAACACGGCTGAACGATATTGACAGAATATTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATTGTGTGGG # Right flank : CTGTGCCGGTGTACCAAAATATTTGTGTTACCCGTGGTGCTATATAGATGCACCTTGAAAAATTAACTTCTGGATTACACTGCACACCCTAGGCGTTGTAGCACTTCCTTCGGGCGTTCATGGATGTAGTCCACAAACCGGGCAATGGCTTGGGCGATATCGTTTTGATCTTTGTGAAACACATTGGCAATGACAGTGTCTTCCAGCCATTTCCACAAGCGTTCGATCGGGTTCAGTTGCGGAGAATACGGAGGAAGGTAAATGAAGTGAAAACTCCGTCCTTCTTCCCGCAAAAACTCTCTCACCGTTTTGGCATGATGAATTCGGGCGTTATCCAGCACCAAGACGATGAGACGATCCGGGTAACGCTCTTTGAGAACTCGCAGGAAATCCAAAAACGTTGTCGCATTGGCCGCTCCTGCTTGATAAAGAACTGTTTCGCCATCATGGACGTTAACGGCGTCAAACAGCGATACGTGAGCATGATGGCCGAACGTCGG # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 6513-6879 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVQ01000074.1 Geobacillus thermoleovorans strain RL 964, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6513 36 100.0 30 .................................... GTACTTGGCGATTTGTCGGGTGTGGTAACG 6579 36 100.0 30 .................................... CCCGATGCTTATATATTTCCGGGCACTCTT 6645 36 100.0 30 .................................... GCGGATTATGTGAAAGAAAAGTATCCAGAC 6711 36 100.0 31 .................................... AGGCGCTTGATCTCGCTCTCAAGCGCCTTTA 6778 36 100.0 30 .................................... ACACGCTGTAGTTCAATCCATCAGCAGATA 6844 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AGCTTCGTCACGGCAAGCCGAAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCGTTGCAACTGCACGTATATGAGTAAGTTTATGCGGTTGCTCGTCTTTTTCGATCTTCCCGTCGTGACCAACCGGGAGAAGCGCGAATACCGGCGATTTCGCACATTCCTGCTGAACGAAGGGTACGATATGTTGCAATTTTCGGTCTACAGCCGCGTCTGCCACGGACATGAAGCAACGGACAAACATTTGGCAAGATTAAAACGCAACTTACCTCCTCGAGGATCGATTCGGGCGATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTCGGGGAACCAACGGCGCAAGAAAAGAAAGTGACATCCACCCAGCTGACGCTTTTTTAAAAAAAACAGAAATGGTTCCTCTTTTTGCATAAGCGCCTTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : TACTTTTTGAGGCGTTCCTCAAGCTCTCGGATTATACCACAGCGATAATTGTAAACTAGCACATTATTTCAGAATCCCTTTTTCAAATTATTTCAGGCGGATTCGGAAATAATGTGCAAAATTTTTGCGGATTGTTCCGGATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 8968-7927 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVQ01000072.1 Geobacillus thermoleovorans strain RL 941, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 8967 30 100.0 34 .............................. TCAAGTCAATACGTCACGATTGTGGTGGATGATC 8903 30 100.0 39 .............................. AAAAATGTTTTTTGCCATATCAATCGCCAACTTCATTGA 8834 30 100.0 35 .............................. GACGACGAGTTCCGCAAACGAGATGTGGAACTTGT 8769 30 100.0 35 .............................. GCAATATCGCTAGCATTGAAGTCACCTTCTCCGAC 8704 30 100.0 35 .............................. ATTGCTGCCCAACAAGCACGAACCGGTTGCCATTC 8639 30 100.0 38 .............................. GTAACAGTTTCGCCGTTTTCTCCGGCAAGTCGGCTTCC 8571 30 100.0 35 .............................. CAACAAATCGCCTACGGTCACGTCATCGGTCTTGA 8506 30 100.0 39 .............................. CTCGCTTTCACATTGCGAGCGTCAAAATCCATTTTCACA 8437 30 100.0 35 .............................. GTATTTTTGGAGCGTCGTAAATAACCCGCTCCCAC 8372 30 100.0 34 .............................. CTGTAGATGAAAACAGCGTGGACGTATGGCAAAG 8308 30 100.0 39 .............................. CCTAATGTCCGATAACAGCCTACCAATCCCAATCCGTCA 8239 30 100.0 121 .............................. AGTTGTGAATATGCGTCAAGGCCATTCCTGTGCATGGAGTGAATCCTTTGACACATAGTACGATGACTGGCTTTTCATAGAAGAAGAAACAAGAATGCTTCTTCTTTACGCCAAAATAAAG 8088 30 100.0 35 .............................. TATGCAGAAACTCAGCGCATAAATCAGAGTGATTA 8023 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 7956 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 15 30 99.1 42 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGTAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGTCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : GCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAGT # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.55, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 8948-8785 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVQ01000082.1 Geobacillus thermoleovorans strain RL 975, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8947 30 100.0 37 .............................. TTGAATTGGATGAAGAAGCTGCTGATGTGTTTCGTGA 8880 30 100.0 36 .............................. ATTGCTAAAGAAATGGCTAAATACCAACGCACTCAG 8814 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCACGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGTGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGCCCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATGTTTTTTGCGCAAAAATCCTACAGCTATTACGGCCGAACCATATTGACAGAATTTTTGCAACGTGATATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : TCCGGTTCAAGATCGGCGGCTGTGAGTCGTTTGCATGTGTTTCTTGTACCTGCCGACAGGTTAGCTATCTTTTTCGTCGCTTTTGTTGTCTTTGTTTGAGATGTGAGGGCTACCCGTCCCCTTCCATTGAAATCCTCGCCACGCGCTAAGGTGTTTCTTCTCCTTCTTTCTGTTCCCTTTTTCGCAGCAACCTCGTTTGATGCGGTATACTTGATAGAAGGAGCAACATTCGCTTGCTTCCGGATGGGCGTTTGTTTTTGCTTTTTCAGGATGGGGGCAAGCAAAGGAAAGAAAGGGGAACGGTTATGCGCTGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGCGGACAGTGATCCGCACCGGGGTGACGGCGGTGTTGCCGCATGGGGGCAACTCGTTTTTGGAGAAGGTG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14552-14778 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVQ01000114.1 Geobacillus thermoleovorans strain RL 1010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 14552 30 100.0 36 .............................. GTTACTTGAAACTTTTGTTACTAGATCTTGTTGCCA 14618 30 100.0 36 .............................. TGAACCGAAGCAAGCAATTGAAATAAGCGGCGTGCC 14684 30 100.0 35 .............................. CAAAAAATCATGACTTTTTCGTCAATCATCTCAAC 14749 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TATTTGCGGCGATCTGAAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGTCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGTTAAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAAAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGATGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGCTCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATGTTCTTTTGCGCCAAAATCCTACAGCCAACACGGCTGAACGATATTGACAGAATATTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATTGTGTGGG # Right flank : CTTGTTTAATAACCCGTGGTGCTAGTTGAGCTTTAGCGCTCAACTAGCCCGAGAACAACAAGTGAGTAAGCCAGTAAAATACCATCCAGTGCCGTTTCAAATCCAGAAACCGAGTTCGCGCGAATCTTGGTGATCCGATACGAATCGACTAAAATCGAAAACACGGTTTCCACCACGTCTGCCGGCAACGAGGATTCCGGCGAATACGCGACGTGCAGCTTCACTCCGGCGCGTTCGCCGTGATACGGCGCCCATGGC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //