Array 1 231905-230147 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYY01000002.1 Fusobacterium canifelinum strain OH4460_COT-188 scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 231904 30 100.0 38 .............................. AAAGTTTTCCTAATTTTTTCTCCCATTCACTATAATAT 231836 30 100.0 35 .............................. TTTGGATCTTATATTTAAGAGTTCTATTATATCCA 231771 30 100.0 36 .............................. GCCAGAAGCCCTTTTTACTAAATAGTGAATGAGAAA 231705 30 100.0 37 .............................. TAAGGTTGGCACAGTCTTTGTTCATGAATAGATAATC 231638 30 100.0 36 .............................. TTAAACTTAATCCATTTGCTTCTTTTGATAATTCTG 231572 30 100.0 37 .............................. GCTGGTTTCATGGGAACACTTGGTTCATGGGCTAGAA 231505 30 100.0 37 .............................. TAAATTAACTCTTAAAATTTCTCTCAAAAATTAATTA 231438 30 100.0 37 .............................. AGAATTAATGAAAAAAAAGTACCTTATGAAATTAAAA 231371 30 100.0 36 .............................. ATATATAATTTACCTAGTACAAATAATACTGGTGCA 231305 30 100.0 36 .............................. AAAACAAAAATAAATGGTGTTGAATATTATTTAGAA 231239 30 100.0 35 .............................. GATGAAATATTTTGACAAGATGACTTATGAGGAGA 231174 30 100.0 35 .............................. AAGATGAAGACAAAGTTTTGGAACATAATGAAGAA 231109 30 100.0 36 .............................. ATAGAAAGGCAGAAATAGCGGTATTAAGTGGAAAAA 231043 30 100.0 36 .............................. AATTTAGAAATAAGCACAGATGCAAAAGCATTTGAA 230977 30 100.0 38 .............................. GGATTTGGTTTAGATATTGCAAATTCAGAAACTTTATT 230909 30 100.0 37 .............................. AGCAACAGTTAATATAATTGGTGTATTTAGTACCAAG 230842 30 100.0 36 .............................. TCTGCTGCTTGGTCTGCATATTTCCACATACTTTTA 230776 30 100.0 36 .............................. GGATTAACATTGTTAGGGATTGCCTCTCTTGCTGGA 230710 30 100.0 39 .............................. TTTTATGTCTTTTTTACTTACTTGAGTTCTATTTTTTTG 230641 30 100.0 38 .............................. AATGCAGATATTTCAGGGGACATAGAATCTGTAATTAC 230573 30 100.0 37 .............................. AATTGTATAGCTCCTCCCATTAGATTTTCAAAAATTA 230506 30 100.0 37 .............................. CAATCCAAGAAATATATGGAATTATTTCTTTGTTTAT 230439 30 100.0 36 .............................. TTGCCTATCGGTTCTCCCATATATACAAGTCTATAT 230373 30 100.0 34 .............................. AAAAACATTTGAATGTCTTTTACATTAACATTGC 230309 30 100.0 36 .............................. GTTGCTGTAACTTTACAATGTATTAGGGCTTTTGTT 230243 30 100.0 37 .............................. AAAATGATATTTGTTTCTTCTAAACTTTCAAAGTTTT 230176 30 80.0 0 ....................A..AAA.TT. | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 99.3 36 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : ATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGTAGTATACGATATTTCATTAGATGAAAAAGGTAGTCGAAATTGGAGAAAAATTTTTGGAATTTGTAAAAGGTATCTTCACCATATTCAAAATTCTGTCTTTGAAGGTGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATACATTAGAGATGATTTGGACTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTGTAAAAATTATTGTCTACCTCTAATAATGTAAAATTAGTGGAAGATTGACAAAAGTTATAAAAGTGTTTATTTAGAAATAAACTTAAAGAAATTAAAAAAGTTAAATAAAGTAAAATTTTTTATTTTTTACTAAAAAAACTTACATTGACAAAAAGATATAAAAAAAGTATTATGTAAGAGTAGCTTTTTTAGCTATCC # Right flank : GGAAGAGAGGAATTGAATAAAGAAGTTAATAGTGTTATATAACAAAAGAATAAATGAAAAATTAAGAGAATTAACTCCTTCTTTTTATAGAACTCAATTCTTCTTAATAAGTTAAATTAAATTTGTCTAACTTTTTGGGATCAGTACAAAAAAGTAAAAGTTAACTAAATAAATTAATTTTAACCATGTTAAGTACAACTTAATAAAATAAACTAAAAATAAAGTACGCTTAAAGTAATAAAAAAAATTAAAAAAATAAATTTCAATTAAAATGTTAATATAATGAACATAAAATTTTAAGACAGAAAAAGAAAATTACTAAATATAAAACCAATAAATTTTTGCTAAAAATTAAGTGAATTTTACAATAAAAATATTGCATTTAATCGTAATTGGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAAGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGGCAAGTTAGAAAAAAAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 62451-64276 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYY01000003.1 Fusobacterium canifelinum strain OH4460_COT-188 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 62451 36 100.0 39 .................................... CTTTTAATACTTTTTAGTATTAAGATTATTTCTCTTTTA 62526 36 100.0 40 .................................... ATAATTACACCTTTTTTAAATTCTTTATTAAAGTTGTATT 62602 36 100.0 38 .................................... CTTTTATTGAATTCTATATACATTTTATTCTTAGAATA 62676 36 100.0 38 .................................... TAGTTTTATTTTTTCTGTCTATAAAAAAACTTCTTTTA 62750 36 100.0 37 .................................... TGTTTTCTTTGCCAGTTAAGTGGTCCTACTGTTTCAT 62823 36 100.0 40 .................................... TCAAGTCCACCTGCAACTATTGGATATATAAACCTTTCTT 62899 36 100.0 38 .................................... CTTTTTTAACTAAATTAAAAGTCTTTTCTGTGTTTTTC 62973 36 97.2 36 ...................T................ TAAAAAGTATAAAAGGATATGAAACTAAATTGAATA 63045 36 100.0 37 .................................... AAATATAATTTTTTATTTGTATCAAATTAAAAGTTGT 63118 36 100.0 36 .................................... CACCAACCACCGATATAGCCATTTTTATAACCTTGT 63190 36 100.0 40 .................................... CAGCTATCTTCCCACAATGATCCATCTTCTTCCAGTGTAA 63266 36 100.0 39 .................................... TCATAAGCCCATTGACTTATATAATTATAAGAGTATTGA 63341 36 100.0 37 .................................... CTACCATAGGTAGAGTTGTAACACCTCGCAAGTCTAG 63414 36 100.0 41 .................................... TTTTGAGTTTTCACCATTTCAAATATATTTTCATTGTTCTT 63491 36 100.0 39 .................................... CTAATGAAATGCTAACTCCTAGATTTTTAAATATGTTTA 63566 36 100.0 41 .................................... TTTTCCATAGTTCCACCAAATTCAAGACATAAATTTTTCAA 63643 36 100.0 41 .................................... ATACAATTTTTATCTATAGCTCTGCACCACAAATAAAGCCC 63720 36 100.0 40 .................................... TTATCTACCATTATTTCCTTAACTTCACCAACTGCACCAA 63796 36 100.0 36 .................................... ACACAGTATAACATTTTCTTTCATTTTCTCTTTTTA 63868 36 100.0 37 .................................... CTGTTAATTGAATGACATCATAAGCATATCTATTAAA 63941 36 100.0 42 .................................... TTTATAAGTACTTATTTTCCCCCATTTATCTTTAACCCCTTC 64019 36 97.2 38 ...................T................ TTTTTAAGCTATATTCCTTATTAGATATACTATTTAAA 64093 36 100.0 40 .................................... CCTTCTAATACTAGCAATTCTCCAATAATCGCTATTTTTT 64169 36 100.0 36 .................................... ATTATCTATATTTTTTAATAAACTTAATAGAATTAT 64241 36 94.4 0 ................................G..T | ========== ====== ====== ====== ==================================== ========================================== ================== 25 36 99.6 39 ATAAGAGAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : GTAGATATTTATAAGCCAGTTTTAATTAGGTGATAATTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAATTTTTGAAGATAACTTTACTGTTATTATAATTTATGATATTATATCCAACAAGAGAAGGACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCAGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTACTTATTGAAAAAATTGATAGATATGCAAAGCCAGAAGATTTAATAAGAATCTATAGATTAAATCAAAATGTAGTAACTCAAATTTATGGAGAAAAATTAGAAATTGAAAATGAGATGTACTACTTTTTCTAATGAAAAGTAGACGATATGATAAAAATGGGAAGTTCAATATGATTTTTGATAAAACAAAATATAAATTTTTAAAATTTAAAAAGTCACACGATAATAGCTCTGTAAACTATTGCAAACAAAAGTTTTTTTGAGTATAGG # Right flank : TATATCTCATCTACTTTTAATTAAAATTTTGATTGTAAATAAGAAAGAGTATGGTTTTGAGAGAAGATAGAAGTTCATTTTGTTGACAAAAAATCAATATATTTTTATAATACTAGTATAAGAAAATAGAATTTAAAAAAAGGTAAAAAATATGATAATATTCCAATACTTAATCAAGAATTTCTCACAATTGAAATTTTTATAGAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAAATACTACTTTTTACATTGTTTATAGGAATTTGTATGACTGGAGTGGCAAATACAAAAGAAAAAAATCCAACTCTTTTAAAACAAGTATATAAAAAGGAAGAATTGATAACATTAGACAAACAAAATGTAGCAGGAGGAAATGGAACTTTACATGGAAAATTTGCCTTTACTAGAGATATGGCTACTGAAGAAGATGCAATTAAAGAAATAGGTTGGATGACATTAAACAAGGGGGAATCTGTTGGAGTGCACCC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //