Array 1 152807-156314 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXN01000004.1 Halomonas hamiltonii strain KCTC 22154 sequence04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 152807 29 100.0 32 ............................. GATTCTGGCGTGCTGCTGGAGCTGGCGCTGGC 152868 29 100.0 32 ............................. CAGTTGGCTAGCATGAGGGCGGCGTGATGAAT 152929 29 100.0 32 ............................. CCAGCGATGTGCGGATTGACGACCTGATTGAC 152990 29 100.0 32 ............................. CGGGGGTCACTGAGGTTCGATACGCTGAGCCG 153051 29 100.0 32 ............................. GCCTTCTTTCCAATCGTCAATGGCGCTCTAGA 153112 29 100.0 32 ............................. TGCAGTTAGCCGAGAGCCAATCCAGGCCATGC 153173 29 100.0 32 ............................. CCCTGTAAACGCTCGCACTCGGTGGGCGTTAA 153234 29 100.0 32 ............................. GATGGTTGATACTCAAGGCGCTCCTTGATCTG 153295 29 100.0 32 ............................. CACAGGAGCCAAATATGAGTCAGCAGGATCGT 153356 29 100.0 32 ............................. GGTGTTCTGGTGGGAGGTATTCGATTGATGGA 153417 29 96.6 32 ............................A CACACAGGAAAGCCGCCATGTGGTTTCAAAAC 153478 29 100.0 32 ............................. TACGCGTTTGCATCGCGGTTATAGCGCCGCTG 153539 29 100.0 32 ............................. TTTTCAACACCGCTTCCCAGGGCGCAATCATC 153600 29 100.0 32 ............................. CCACGCGCTGGCATGAAACGAATCGGAGGCCT 153661 29 100.0 32 ............................. GCCGCGTCATCGTTCGCTGCACGGAGTTTGAA 153722 29 100.0 32 ............................. TCGATTTGGCGAGCTTCGGCTTCGGCCTTCTC 153783 29 100.0 32 ............................. GGCGACAGCGATCACAAACGCAACGGTCGATG 153844 29 100.0 32 ............................. ACCGTCGAAATAGCCTAGGCAGGGAACAGAAA 153905 29 100.0 32 ............................. GATACGAGCGCCGTCGATCTCGTGCTGCCGGA 153966 29 100.0 32 ............................. CGTTCAGCCTCGCCGGGGGCCTTTGCCAGCAC 154027 29 100.0 33 ............................. GGCGATACCATCCTGATAGACATGCAGCGCACC 154089 29 100.0 32 ............................. CGCCATGGCGATGCCCGTAGGAAGCAGCATCC 154150 29 100.0 33 ............................. ACGGCGTTCGCGCTCAACATTATGCGCGCCTGC 154212 29 100.0 32 ............................. GTTGGCTGGGCGCGGTAGCCCGAGGAGGTTGA 154273 29 100.0 32 ............................. CGATTCATAATCGGCCAGTAGCTGAAGGAGGT 154334 29 100.0 32 ............................. CCAGCTTCGTTCCAGCGTTTTTTGCTGATGCC 154395 29 100.0 32 ............................. GCGATGACGCCGGAAGACCGGAAGCGCCTGAA 154456 29 100.0 32 ............................. CGTAGCAAGCAGATTAAACGAGCTTAAACGTT 154517 29 100.0 32 ............................. GAATGCTGGCGTTCAACCAGTTCACTCAGGAC 154578 29 100.0 33 ............................. CGAAATATTCTGCTTAAAACGTTTGTGCCTCAC 154640 29 100.0 32 ............................. TGTAGGTCTGATTCGTCGGTTTGATCGATGTG 154701 29 100.0 32 ............................. ACTTCAACCTGTTCGGCGATGGCAACAACTGG 154762 29 100.0 32 ............................. TCACAAGACGAGATGGCGAGACTTGGGCAGAG 154823 29 100.0 32 ............................. GGTGCATTCAACTCCCAGCTTGCGAAAAGCAG 154884 29 100.0 32 ............................. AGCTGGCTGGAGGCCATCCTGTGTGGCTGCCT 154945 29 100.0 32 ............................. CGCGCCAAGGCGGGCATGAAACGTATAGGAGG 155006 29 100.0 32 ............................. CAGGCGGTGGCCCTGGATTTCGTGAACGAGCT 155067 29 100.0 32 ............................. CTGCACTTCGCCGTGCCGATACTGCGCTGGGA 155128 29 100.0 32 ............................. CGATCATCTGAAGCTCATCCGGGAGGCATTCA 155189 29 100.0 32 ............................. CGTCGGCCATCGTGACCGTGATCGATGATGTA 155250 29 100.0 32 ............................. GTCGACATGGAAGCCGATGGCGCCATGGCCCG 155311 29 100.0 32 ............................. GCCAAATTGACCTGTGACCAGCGCAGGCCAAA 155372 29 100.0 32 ............................. CGATGAGGCTGCCGACCACTTTGGTAATGGTG 155433 29 100.0 32 ............................. TGAATAGTTCGCCCTTTGGGTAGCTCCACCCG 155494 29 100.0 32 ............................. CATGATCGCTACCGGCGAGTGGGTAGGCACTG 155555 29 100.0 32 ............................. CCTAAGCGCCCGCCTCGGCACCATCGCCGAAC 155616 29 100.0 32 ............................. GCGCTTGGCGTAGATGTCTCCGATCAGCATGT 155677 29 100.0 32 ............................. CGTCGAGACATTGACCAGCGCCTGGCTGACCG 155738 29 100.0 32 ............................. GCGGTTACCAGCACCCACCTCAGAATCAGCAG 155799 29 100.0 32 ............................. TAGGGGAACGTTATAATAGGGACACCAGCGAC 155860 29 100.0 32 ............................. TCCTTCTTTTTACTATCTTTTCTTTAATAAAT 155921 29 100.0 32 ............................. AGGCAGTCATGAAACTCACGTTTGCAGCAAAA 155982 29 100.0 32 ............................. GTGGGCAATGCCAGCCGGAAGCTAGTCTTGAT 156043 29 100.0 32 ............................. CGGGCCGCCAACGATGCCAACGGTGGGCGCTC 156104 29 100.0 32 ............................. CCGAAAAATACGGACTGATCGAGGAGAACAAT 156165 29 100.0 32 ............................. ATGGCGGAGAGCAGGGCGCGGCGTTCGACGTT 156226 29 100.0 32 ............................. CCTACTACACCAGTCCCGGCCTATTGCCCACG 156287 28 93.1 0 ......................-A..... | ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.8 32 CCGATCCCCGCACGAGCGGGGATGAACCG # Left flank : GGCGAGATTCAGCCCCCACCGCCAGCACCTGATGCTGTGCCACCTGCAATTCCAGAACCACCGTCGGTCGGTGATGCCGGGCACAGGAGCGGATAAATGGCGATGCTCGTAGTGGTTACAGAAGCCGTGCCGCCACGCCTACGTGGCAGGTTAGCAGTGTGGCTTTTAGAGATTAGAGCCGGTGTTTATGTGGGTGATGTAAGCAGGCGCATTCGCGAAATGATCTGGGAGCAGGTCGAAGCGCTAGCTGAAGATGGCAACGTCGCCATGGCCTGGGCAAGCAACCATGAATCGGGGTTTGAATTCCAAACCTACGGTGAAAACCGCCGAGAGCCGATTGATCATGACGGATTGCGTTTGGTGCGTTTTTTACCGCCCCAAGTTAACTAACTGATTTTATTTGCTCTTTAACAATTTGAAGTGGTTAAAAAGTAAGCAAAATAGCTGGTGGAATTTTTATCTGCTATTTTCTTCATGTAGATCAAGTATCTACAACAAGT # Right flank : GGGCACCAGCATGGAGGGCGTGGGCATCTATGACCGATCTCCGCTTAGGATATAGTTCATGTGTGCGAGGTTTTGCAGTGAGAATCAGCTTTTCTACCTGTCGTTATTACATGGAGCCTAGCCGATATTTTGCTTACACTTCTTCAGGTAATGCGAGAGACCAATATTCGCCTGGTGTGTCCTGTGAAAACAGATGAGGCATTTGGGGATGGCGAGCCAACCTCGCATTACGCCTCCTTCTTGGGAAGGTGCAGCTTTCCATCGAAGTGCATGGCTGGCTGACCGATGTAAGCTGACACCTTTTCTAAAGATCTAATGCACTAGCCTAGTGTGCTTAACCCCCCGCCCCAACAGGTCGCCCGAGCGGGGGCCGTGGTTACTCTTTTTCGTCCTCTTCTTCCTCTTCCCAGTGTTCCATGGCGCGTTTGTCGTCGGGTAGGCGCACGATGTCGCCGATGACGATTTTCTGGTGTGATTTGAAGCGGTGGCCGTGTTCGTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //