Array 1 226390-229039 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYCT010000026.1 Klebsiella pneumoniae strain MRSN517281 MRSN517281_contig00026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226390 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 226451 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 226512 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 226573 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 226635 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 226696 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 226757 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 226818 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 226879 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 226940 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 227001 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 227062 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 227123 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 227184 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 227245 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 227306 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 227367 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 227428 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 227489 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 227550 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 227611 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 227672 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 227733 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 227794 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 227855 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 227916 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 227977 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 228038 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 228099 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 228160 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 228221 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 228282 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 228343 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 228404 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 228465 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 228526 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 228587 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 228648 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 228709 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 228770 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 228831 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 228892 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 228953 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 229011 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //