Array 1 3839609-3843054 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQLV01000001.1 Halomonas sp. TG39a U738DRAFT_scf7180000000004_quiver_dupTrim_5727.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3839609 29 100.0 32 ............................. CCTGCCCATGAGCCTGAACGCCTGCAGCAGTT 3839670 29 100.0 32 ............................. CTGTTCGCGCGGATCCAGGAAGGCGAAGTGAA 3839731 29 100.0 32 ............................. TTTGAAGGGCGACCTGCAGGCGACGTCTGCAG 3839792 29 100.0 32 ............................. AACTGGAAGCCGCGATTATAACGGGCCGCTTT 3839853 29 100.0 32 ............................. CGAAACAACGTGACCGACGCCGTTGCGGGTTA 3839914 29 100.0 32 ............................. CGTTAGGGGTTTCCAGCGTCCAGTATTCGCGC 3839975 29 96.6 32 ............................A CTGCACACACTGCCCATGGAAGCGCTCAGCGC 3840036 29 100.0 32 ............................. ATGGCAATTTCAGCAATGCCGCCATCACGGGC 3840097 29 100.0 32 ............................. GCTAACTGATGCCAGAGATCACTAACTTTGAG 3840158 29 100.0 32 ............................. GTTGCCGCGCCTATCGCTATACCGTTTATTTC 3840219 29 100.0 32 ............................. ATAGAATTACTGGCGCTTGCTAGTGATTTCAC 3840280 29 100.0 32 ............................. CGGCCAGAAGGCACAGCGCGCAAGCGTTTCAA 3840341 29 100.0 32 ............................. CGTTATTTAACGCTGCCGTTAACGATGAATTC 3840402 29 100.0 32 ............................. ACGGAATGCGCCGCTACGCGGTGTTTAGCGAC 3840463 29 100.0 32 ............................. CCGCCGCTGCAGCCATGAAAATGATGATGCCT 3840524 29 100.0 32 ............................. GTTGTGTCGTGTTGGGTGCGGGCGTCTATCAT 3840585 29 100.0 32 ............................. GGTGCGTAGCGTTTTGATGGTGTGTTGGTCGA 3840646 29 100.0 32 ............................. ACGACGTGCTAATGACCTTGATGGTCTGGTGT 3840707 29 100.0 32 ............................. TGCGCGATGAGTCCATCGAACCCCCGATGATC 3840768 29 100.0 32 ............................. CGCCAGCAATAGCAGCAACGAGCCGCCATAAA 3840829 29 100.0 32 ............................. CAAATTGTTGAGCGCCGCATCTTCATGAAGCG 3840890 29 100.0 32 ............................. TATTTCAGCCCGCGCTGGATATGGTTAAAAAG 3840951 29 100.0 32 ............................. CATCTGCCTGTGGGGAAATGCCTTTGTAGAAA 3841012 29 100.0 32 ............................. GCAAGTGGGCACGTGAAAGAAAGCTGATAACG 3841073 29 100.0 32 ............................. CGCGTTACGTGGCTGCGTCACCCTGCTAGCGG 3841134 29 100.0 33 ............................. TACTGAACGGCCTGCCCGAGAACTACCTCGGCG 3841196 29 100.0 32 ............................. AGTGACCGCTGCCGGTGAACCGCTGTCTAGCT 3841257 29 100.0 32 ............................. CAGCTCTTGCTCATTAGTGATTTGGGCTTTCA 3841318 29 100.0 32 ............................. CGGTGGTGCTTCTTCCGCGAGGCCTAGGCGTT 3841379 29 100.0 32 ............................. GCGAGGTGATCAATAAGGGTGATTTTGTGATC 3841440 29 100.0 32 ............................. CGTTAGCCCGGCAGCACAAGGCACATTCCAGA 3841501 29 100.0 32 ............................. CTGTTGCCGCCCGAGCTATGGCAATCATGGCC 3841562 29 100.0 32 ............................. AGTTCACGCCGGGCGGCATCCACTATCTGGAA 3841623 29 100.0 32 ............................. GCGGAGGAACTGATCCCATTGGCCCGCATTGG 3841684 29 100.0 32 ............................. CGTAACCAGGCCAACGGGCGCAGCGACCGGCT 3841745 29 100.0 32 ............................. TCACCATCACCCAAATCGGCTTCACCGCCACC 3841806 29 100.0 32 ............................. TCGCCACCGCCATCGCCGCAGATTCTGCCGCC 3841867 29 100.0 32 ............................. CATCACTATCGCATTGAGCAGTACCAGTTCGC 3841928 29 100.0 32 ............................. GTGGCGGCATGGACGGCCCCATCGAAGTCGAC 3841989 29 100.0 32 ............................. TATTCTTACACTTTCTCACGCTGGTCTAATGG 3842050 29 100.0 32 ............................. TGGGCGCTCGGTGTTCAGAAACTGGGTGTTGA 3842111 29 100.0 32 ............................. TATATGGTCATTATCATTACCGATGAAAACGA 3842172 29 100.0 32 ............................. TCTTTGGAGTAGGACGTATTGAGGATGCGCAC 3842233 29 100.0 32 ............................. CAATGTGTTTATTTCCAGTATGCCGGGTCAAA 3842294 29 100.0 32 ............................. CCTGACCATTGGAGCGTGTCAGTAAGACAGCT 3842355 29 96.6 32 ...................A......... ATGGCGAACAGGTCGCGTACGGGTGAGTGCTT 3842416 29 100.0 32 ............................. GATGGGCGGCCGCCTTCTGGGCCCGAGGGTAT 3842477 29 100.0 32 ............................. GCGCCATGGGGGTGCTGGGTTCAGCGGTTGAT 3842538 29 100.0 32 ............................. CGATGAGCAAAGTGCTTTAGCGTCGAGCCTGG 3842599 29 100.0 32 ............................. CATCTAGCCGTGCCCATGGAATATGGGTGTCA 3842660 29 100.0 32 ............................. GCAGAAACGCCCGCCGCCTACGTGTATCTGGC 3842721 29 96.6 32 ...........................T. ATAATGGGTTGGTTTGCCAGTTGCCACCGACG 3842782 29 96.6 32 .......T..................... CCGATCATCACGCCGCAAATCATTCAGGAAGA 3842843 29 89.7 32 ..........T.....T........G... ATCCATGGCTATGAGGCGATAGGTGACAACTT 3842904 29 86.2 32 ........T..A.GG.............. AGATTGCTTTCGAGAAAGTGCATCGCGATTAT 3842965 29 86.2 32 ...C.......A.GA.............. AGGTGTTCGTAATGGCTGAATTAGCAGGCAAT 3843026 29 79.3 0 .............T.ATA.......G.T. | ========== ====== ====== ====== ============================= ================================= ================== 57 29 98.7 32 CCGATCCCCGCGCCTGCGGGGATGAACCG # Left flank : GGCGATATACAGCCGCCACCGCCAGCACCCGACGCGGTTCCACCTGCCATTCCAGAACCACCATCGGTCGGCAATGCCGGGCACAGGAGCGGATAAATGGCGATGCTCGTGGTAATTACAGAAGCTGTGCCGCCGCGCCTGCGTGGCAGGTTAGCGGTATGGCTATTAGAAATCAGAGCAGGTGTCTACGTTGGCGATGTTAGCAGGCGTATTCGTGAAATGATTTGGGAACAGGTCGAGGCCCTAGCCGAAGATGGCAACGTGGCAATGGCCTGGGCCAGCAACCATGAATCCGGTTTTGAATTCCAAACCTATGGAGAAAACCGCCGCGAACCCGTCGACCATGACGGGTTACGTTTGGTGCGCTTTTTACCGCCACAAGTTAACTAGCTGATTTTATTGGATCTTTAAAAATTTAAGATGGTTAAAAAGTAAGCAAAATAGCTGGTAGAATTTTTATCTGCTATTTTCTTCTTGTAGATCAACTGTCTACGACAAGT # Right flank : GCTCATGTGGCGAAAGAACCTCATTGAGATAGATGGTCGTGGTTAGACCTGAGATATGTGCCCGTGGCACCGCTGCGCGGTGCTTTCGCGGGTGCGCCTTAGGCTTACCACGCGCTACTCGAAAGTGCATGATCCGTCATGTGTGGCAAAGTCGGTGTTGCCATATAGGCAGTTCATAAAGCTTTGCCAGCGGCGTTAGCTCCCACCTCAGAGTTCGCTGCCGCCCAGCCAGTATGGCTATAGACTTAAGGTATGTGCACCTGGCACCGCTGTGCGGGTGCGCTGACGATACTCGATGTGTTGCTTGGTTGTTTAGCTTTGCGCGGAAAAGCCACCGTGTTAGTGGCTGGTGTGGTTAGTTTAGAAAATGCTAATCTTTAATCTTCTTGTGTGGGTGTTTCCATGGCGCGTTTGTCGTCGGGTACGCGGACGATGTGGCCGACTTCGAGCTTGTGATGGCTTTGGTGGCGGCCGCCTTTGGTGTCGATGATGGCGGCGAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //