Array 1 26967-28815 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACTRZ010000003.1 Francisella philomiragia strain F1100 philomiragia_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 26967 37 100.0 35 ..................................... GTAATGAGGAGGCTATGAATGGTATTAGGGCAGCT 27039 37 100.0 35 ..................................... ATATTTGATTATGGCCAACGAATTTGCGGAACGGT 27111 37 100.0 36 ..................................... AATTCCTGCACTAAAAAATAAAAAATATAGTTTGAA 27184 37 100.0 35 ..................................... TTCAAAACTTCTGATACTAAAAATTCTTGATAAAT 27256 37 100.0 36 ..................................... TAAGTATAGTTGGCTTAACAAGCTTCCATTCATCAA 27329 37 100.0 36 ..................................... TTGGTTCGATCTTTAAAACTCTTGCTAGTTCAGCTT 27402 37 100.0 34 ..................................... GCTAGATGGTTTATGGGTGCATCAAAGCCAAGTA 27473 37 100.0 35 ..................................... GTGATAGCACTGTTTTAAGCACCAAAGAAAGATAT 27545 37 100.0 36 ..................................... ATTAGTACTTGATGATGTTATTGTCGGTTTCATGGA 27618 37 100.0 34 ..................................... TTTTAAATATGTATTTTCCCTGTGGAAAAATATT 27689 37 100.0 37 ..................................... TAGTAAGTACCTTTTTGTTAGGTTTCCATTCAATGGA 27763 37 100.0 36 ..................................... AGATGATGTGGTAGGGGATGTTAAAAGAATGATTCT 27836 37 100.0 36 ..................................... TAAAGATGTGGGTTTCTGCGAGCTAGATCCTTTTGT 27909 37 100.0 37 ..................................... GGTAAGCATTTTGAGTGTTAGTTTGTGTTGCTGATTG 27983 37 100.0 35 ..................................... ATTTATGAGGGTGATATTGTTATTAGAGACCTCGA 28055 37 100.0 35 ..................................... GATTATGATTTGTATTACAAGTTTCAAAGCGTTCC 28127 37 100.0 36 ..................................... AGAAAATGTACATAAAGAAGTAACTTGCAAATATTT 28200 37 100.0 36 ..................................... CAATAGCAGTTTAGCCGTTGGCACATGGATAAATAA 28273 37 100.0 34 ..................................... AAAGAAAGACAAATGATTAATATTGGTAAGTTGG 28344 37 100.0 37 ..................................... GTTTAGTTTCTACAGCTAATAATGTAACATCGCTTGG 28418 37 100.0 34 ..................................... AGAACATTGCCAGTTTAAGATAACGCTGATAGAA 28489 37 100.0 35 ..................................... CGAGATGGCTTAGTTTTCTTAATCATGGGCTTTAC 28561 37 100.0 36 ..................................... CAAAAGAGCAATGATTGCATGGTTCCTAAATTTTTT 28634 37 100.0 35 ..................................... CAAATTGAGGATCAACTTCAACTAACATATGTATA 28706 37 100.0 36 ..................................... AATTTTACTCGCAATTAGGGTTATATTTTTTTAGGT 28779 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 26 37 100.0 36 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : CATTTTGGGCCAATCATAGTAAAAATGCTGAGTTTATATCTGAGCTAATAAACTATATCTATAGCAATAGCGACTATACGAGTATTATAAATAATGATCTTGCTTTGGTTGGTTTCTCTGCTGGAGGATTAGCTACTTTGATAGCGACATCAGAGAATACTAGGGTCAAGCTTTGGATAGGATTAGACCCTGTAGATGTAGGCAATCTTGGCTCTCAAGCCGCCAAGAATATAAATTGCCCAACCTATATAATAGCTGCCTCAGCAAGCGCATGTAATGCCAATAACAACTACAAAAACTTCATAACAAATCTAAAAGAAAACAATCTTATCAAAATTGATGGAGCTGTACATGTCGATGCTGAATGGCCAACTAATAGATTCGCTGAGTTGTTCTGTGGTAGATCCACACAGCAAAAAAGAGAAAGATTTCATGATGATGTGTTGACGATTTTGGATAAGAGTTTTAAAAATGAAAGCTATATACAAAATATAAAATGA # Right flank : GAGCCAAAATAAACCTAGAGTTTATAAGGCTTTGCGAGAATAATTTATTGGTGTTTTTTCGCAAACACCCTACTTGTCAAAAAAAGTAGACATTTTGCGAAAAAGTATCTAAAATAGATTTTGTACCAAATATTTAATGCTCTGTAATCATTTAAAAGTATTTTGAACGGACCTCTGTTTGACACGTCTGATTGATATAAAACAAAAAATTGCCATTTAAATGGCTTTTTTTGTTTGTGTAAATATGGATTTGATAGATACCCAATCAAGTTGGGTATTACGAATGGTATTTGTATAATGCTTATCGAAATTCCTACTAAATGGCGATCTAAGAAAATCAAGCTGAGTATTGCAAATTAACTCTATACTTTACAGGAACTTGATAGGGTTGATGACCTTTTGCTCTTAGCGATCATTGCAAAAGTTAAGATACTCACATTGTATACATTGATGACCTGTTGCTGATGAATCAGGCTTATTGCCATTATCAAGAGCATTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //