Array 1 181909-184986 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKUX01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181909 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 181971 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 182033 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 182094 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 182155 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 182216 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 182277 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 182338 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 182399 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 182460 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 182521 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 182582 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 182643 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 182704 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 182765 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 182826 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 182887 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 182948 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 183009 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 183070 29 96.6 32 A............................ GGCGCCGGCCTGATCACTATCGGGTAACGGTG 183131 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTTCACCTGGAA 183192 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 183253 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 183314 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 183375 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 183436 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 183497 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 183558 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 183619 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 183680 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 183741 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 183802 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 183863 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 183924 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 183985 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184046 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184107 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184168 29 100.0 32 ............................. GAATATAAAACCGGATTCCATATAGCCCTGTG 184229 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184290 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 184351 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 184412 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 184473 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 184534 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184595 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184656 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184717 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 184778 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 184839 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184900 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184958 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGGAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //