Array 1 1923371-1921685 **** Predicted by CRISPRDetect 2.4 *** >NC_017501.1 Neisseria meningitidis 8013, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1923370 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 1923304 36 100.0 30 .................................... TCAGGGCTATCGGGGCTGACCGGTTTATTG 1923238 36 100.0 30 .................................... GGCGGATGGCATACGGCGTGCCTTTTCGGT 1923172 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 1923106 36 100.0 30 .................................... GTGGGAGTTCGTCTATGAATTCGATGGCGT 1923040 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTTCTGTACG 1922974 36 100.0 30 .................................... CTTCCGCACTTCCAGGGGTTAAATCGGGAC 1922908 36 100.0 30 .................................... ACGCTTACCATCAACACGAAAATCGGTAAC 1922842 36 100.0 30 .................................... ATCATGACATCCTCAGATTTAGTATTCAGA 1922776 36 100.0 30 .................................... ATTATTTTTGATTTTGATTTTTTTCGTACA 1922710 36 100.0 30 .................................... ATTATTTTTGATTTTGATTTTTTTCGTACA 1922644 36 100.0 30 .................................... GCGGGTTTCCTGTGTGGCGCGTGAATTTAA 1922578 36 100.0 30 .................................... GCGGGTTTCCTGTGTGGCGCGTGAATTTAA 1922512 36 100.0 30 .................................... CTCTCCCCGGCCCTCCCCCACAGGGGAGGG 1922446 36 100.0 30 .................................... CCAAAAAATCTACACAAGCATGGAAATCAC 1922380 36 100.0 30 .................................... ATACGCGCCTCGCACTTGTCCACTCGAGCA 1922314 36 100.0 30 .................................... ACCTGTTCCGTCCTTTGCTGTTCGTCCTTA 1922248 36 100.0 30 .................................... CCTGAGCATCAAAACAGGCGGAAAATTGCT 1922182 36 100.0 30 .................................... GACAGCCAACAGCACGAAAGCAACGGCGAA 1922116 36 100.0 30 .................................... CCCTTCGCTGTATCAAAGTCAGAGAAAGCA 1922050 36 100.0 30 .................................... TAGCCTGCTATGCCGCATATAGCGATGCTT 1921984 36 100.0 30 .................................... CCGACTTCCTTCAAAGTCAGCGCGCGCATC 1921918 36 100.0 30 .................................... TCCGGCGCGTTTCATGGCGCGTTCTTGCTG 1921852 36 100.0 30 .................................... ATGGTCGTCGCGCAACAAAACCCCGCTACT 1921786 36 100.0 30 .................................... TATTCCTCATGCGCGGCGCATTACCTTTAC 1921720 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //