Array 1 41220-40459 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRUL010000002.1 Flavobacterium muglaense strain F-392 Seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 41219 36 100.0 30 .................................... TATATCGGCACCTGCAAGTGTTCAATCATT 41153 36 100.0 30 .................................... AACGTATGATAGCAAAGGACTTGTAACAGC 41087 36 100.0 30 .................................... AAAAGCCCGAGAAATATGCAAGGATAGAGG 41021 36 100.0 29 .................................... TAGGAGAATGGAGGACAGGAGCAATTCAA 40956 36 100.0 30 .................................... ATACGCTTTAATAGGTTGCGTGTCTTGTTG 40890 36 100.0 30 .................................... AGGTACACGTTTTGAGAAATCAATGCAATC 40824 36 100.0 30 .................................... CACTTGCCACATTGCACGTAATGAATACCC 40758 36 100.0 30 .................................... TCACGCTCGAGCTAGTCGAAGCACATTACC 40692 36 100.0 30 .................................... CAAATCCATTAAGTAAAAAATAAGCTGTTA 40626 36 100.0 30 .................................... TTACTTTTATGTCATACAAACCAGCCAAAC 40560 36 100.0 30 .................................... ATATTTTATTATTTCAACCGGAATACAACC 40494 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATTGATGCAGGGTCATATTACAGATTAGGTAATGAAGAAAATAAACTGAAATATGATATAGTAACCAATCCTCACGATAAAACTGGATTACCATTGAAGTATATTTTAAAAAAAGGATTGATGGTTTTGTTTTTCAAAGAAAATTTTCAAGAAATATTAGAATTACCCACTAGTGATTTGCATAATAGATTATATAAATTAGCTAAGTTTGACGCCCAAGGAAGATTAACTTTTAGGACTCATTTTGAAGCCCGACAAGCTAGTGAATTGAAAGAAATTTATAATGTAGATTTTGAGTCCCCATTTGAACAAATTAGATTGCAAGTAAGTAAACTAAATATGTTAGTTGAAGGATATGAGTTTGTATTGACAGCTTCTGGCAAGATTACTTTCATTTAAACAAGCTAATAGTTCTTTGACATTTTGTTCAACATCTTAAACATCTCAAACCACAACTGAAAGGGATAGCATCCGCCCAGCAGGGATGCAGTCGCTTTCA # Right flank : AGTTGGCTTGTTACCTTCTGATAATCATGGGATTAAAGTAGGTATCGTATAAAAAAAATGCCTCTTTATTGGTTTGATAACCCAATATTGAGGCATTTTTTTATTTGTAAAGTGTTGTCTTCTAAATTATTGGTACATTTGTATAAATATTTATTCTATGAGAGTTGTAATTGAAGCTAGCGAGCAATATAAATCCTTTTTAATAGAGGTGGCAGAGGCAATTAAAGCAAAAATTTCATTTGATGATAAAGATGCTTATGAGGATATTCCTGAACATGTTAAATTAGCCGTAGAAGAAAGTCAAGTACAATATGAAGACGGGAAGTACACTGATTTTTCAGTTGTAAAAGCTTCTCTTTTGAGTAGGCTACACAAAATGTAAGGATGCGAATTGTATTAACTGATAATGCAAAGTTTACTTTGCAAACTATTTTTGATAGTATCGAAAGTAGGTTTAGTCCCAAAAGAGCAGACACGTTTTTACTTGAAGTAGAAAAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 19205-19596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRUL010000033.1 Flavobacterium muglaense strain F-392 Seq33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ======================================================= ================== 19205 25 92.0 48 .........A.A............. GACTTTGAAAAAGGGAGCCATCGATAAGTATATTTAGCTTTTATATCT 19278 25 100.0 55 ......................... GATTTCGTTTTTTTGTATCGAATGAAAAAAGCACGCCCTAAGCAACAACTTGAGC 19358 25 100.0 49 ......................... GATTTTGGGAAAAGAGAAGTTATCGCTTCCTCCTCTAGTTGTTTTAAAT 19432 25 100.0 41 ......................... CTTTTTAGCTATCATAACAAAAAACGTGTTACATCATTAAG 19498 25 100.0 49 ......................... CTTTTTGAAAAACCGAAGCCATCGATGATTACATTTAGCTTTTATATCT 19572 25 88.0 0 G..........A............C | ========== ====== ====== ====== ========================= ======================================================= ================== 6 25 96.7 49 TGTCAAATCGAGCGGAGTCGAGATT # Left flank : AGCACGGGTGCCGAATCTAACTGAAGGTCGCTTGTGGCTATGGCTGGAAGGTCACGGCTTATTTTAAGGCCGGCCAGCGGTTGCGTTTTTGTTTTTTTTGGGTTGTCAATAACCAGATCACTAAAGGTTTGACTAATCAATTTATAACTCACTATATTGTAATCTAGATACCAGCAACGTAACGATTGGCTATAAACAGCTCCCAATTGTTTCAATTGAGCAATTGTAGCACTGTCATACTTAAAAAAAAGTCCAATTCGATCCGCATCGCGATGCCATATCTTTTTTACAATTATTTGCATATCAAGATTATAATGCAACTAAAATACTACTTTATTTTAAATAATACAGTATTAATAGGTTGATTTTTAATAGGCTATGATTTTTATTTATGAACAGGTAGGCAAGTCATAATTAAAAGTAAAAAAGTAAACATTAGATGATTGAAATACAGTTGCGTTTTTTCGGTATTTAAAGTATTGATAAACTCTTTTTTAAAT # Right flank : CATCTCCGTTACTAATGAAATAAACGGATCGTGCGTGTATGCCGAGTTGCGTGAAGGATAGCAACGGAAATCCTTTTATTTTTTTTCTTTAAAAAAATAAAAGATTGCAGTGTATAGGTACTATCTTAAAATCCTAATGATTTTCTTTTAATTTTTATATATTTGTTAAACTATAGAAAGCGTTTCATTTTCAATAATGATTTGTTTATCTGGTATAGCCTCGACTTGATTGGGGCTATTTTTTTTGTTTTTCTCTTCATTTAAAAGATTGGTTATATTTTCTTGCTGTTGATTGATTTTCTCTAAATAATTTGGATCATATTCCTCATTTTTTTTCCAAATATGGTATATTAGGACCAATAGTTTTTTTTGCACAGCAACATAACTTTTCATTTTGATCCCATGTTTTTCAATGGTTCGATTGTATAAATCTATTGCTGGTTTTTCATGATGTTTAACAGCTACAAAGGCTGGCATAAATAATGCTCTTCTAATATGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.22, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCAAATCGAGCGGAGTCGAGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //