Array 1 155210-155840 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CABFLI010000011.1 Haemophilus parainfluenzae isolate Haemophilus_parainfluenzae_BgEED17, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    155210	    36	  88.9	    30	..AA..A.A...........................	TCAATCGCACCATGTAAAGTTGAAACATCT 	
    155276	    36	 100.0	    30	....................................	GAACGTTATACCCATAATAAATAAGGCTAG 	
    155342	    36	 100.0	    30	....................................	TTTATATGTGCGTTTGGATTGATGATGCAG 	
    155408	    36	 100.0	    30	....................................	AGCAGTTTTTGCTTCCACTCCTTTGTCATA 	
    155474	    36	 100.0	    30	....................................	GCACGACGTTGATTATGACATTAGTCGGCT 	
    155540	    36	 100.0	    30	....................................	TCAATCGCACCATGTAAAGTTGAAACATCT 	
    155606	    36	 100.0	    30	....................................	GAACGTTATACCCATAATAAATAAGGCTAG 	
    155672	    36	 100.0	    30	....................................	TTAAGCCTAATTCGTAACTTAATCCTTCAT 	
    155738	    36	 100.0	    31	....................................	TGTATTTTTAAAACTTCAGACGGTCGTGAAT	
    155805	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        10	    36	  98.9	    30	GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT	                               	       

# Left flank :   AGCCTTACCATCGGTGAAGTGAAGAATGATGAATTCTGTGTAAATTTAATTCCAGAAACCCTACATCGAACCCTGATCGGCAAACGTCAAATCGGTGATTTAGTGAATATCGAAATTGATCCGCAAACACAAGCGATTGTAGATACGGTAGAGAATTATTTAAAAGCAAGAGGATATAGTTAATTAAGATTACTATAAGGAGGAAATATGTTTAAAGATGAAATTGCTCTTATTCGCTTTTTAGGCCGAGAGTTTATTGTCATGTTTAATGTGTTTTTTCTATTTCCACTTTCAATTATTTTAGTGTTGATTGGCGTTATTCATAGTGTAATATGGAATGTACTTTTAGGTATTGCATTTACTTACCTCGTATTTCTTGTCTTATTTAGGATATTAATCTATTTTTTATATAAAAAATGGGAGAGAGAGCATCAGAAAAAAATGCAAGAAGAGAATGAAGTTAAATACATTATTATTAAATAATAAATTTATACTGTATT
# Right flank :  TAGGGACAGCAAAAAGCCCCATGCCGTAAGGTTTAGGGGCTTTTTTTTTGCCTAAAAAACGGCTAAAAAAGCAATAATTGATTTGAATTGACCTTTTTTTCTTGTGGTTTTTTCTCTCCCACTAAAATTTCCATGCTCGCAAATTGTTTTTCTGTAATAGATAAACATCGAATTGAACCCTCTTCAGGTAAGCGTGCGACGAGTCTTTTATGATGTTTTTCTAACGCATCTCGCCCTTTAATAATTCGAGTATAAATAGAGAGTTGCAACATTTGATAACCATCTTTAAGTAAAAATTGACGGAATTGGTTTGCCGCCCGCATTTTTGCTTTAGTGGTGACCGGTAAATCGAATAGAACGATCATACGCATAAATACCCCCTCACTCATATTGATATTCCTGTAATATATTGATCTCTGGTAACTGCAATGATGTTGCATTTTTTTGAATAAGTGCAATTTGTAAAGAGGCAATGGTTTTATCAATAGCAGTTAAAACAC

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [83.3-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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