Array 1 253-1333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCJ01000137.1 Geobacillus sp. FW23 rawlib.basecaller_c137, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 253 30 100.0 35 .............................. ATCTGTTCATCAAACAGCCCGCGATTGAGGGCTGC 318 30 100.0 38 .............................. CCCTCGCAAGAAAAACGCCATACGGGCTAAAATTTGAA 386 30 100.0 36 .............................. CTCATGTCCTAACCTCGCATCGATCATCTCAATGAC 452 30 100.0 36 .............................. ATTGAACCAAAAATCAAAAAGGGATCGGAAGAAACA 518 30 100.0 36 .............................. GCGGAATCGCAACAGCGAATAGTACAGGTGATTTTA 584 30 100.0 37 .............................. TTGAAGCGGGACCGGAGAAATTCGATGAACTCACAAA 651 30 100.0 36 .............................. TGCCAGGCTATAAGAAAGTATGGTAAGGAGAATTTT 717 30 100.0 35 .............................. CTCCTCGACGAGTGGCAGAAGCGCACCCTTTTGTA 782 30 100.0 36 .............................. ACAAGAATTTCCGATGGTTTGTTATGACTGTAACAC 848 30 100.0 35 .............................. CATGATGCTATGATGCATGACATCGAAGCGAAAGT 913 30 100.0 34 .............................. AATGCGTTTGGTGATGTTGACGGCATCCCAAACC 977 30 100.0 35 .............................. CATGATGTGCGGTGATCCGCGAATTGAGGCGCACC 1042 30 100.0 36 .............................. TCACATCGTTGAGATCGATCACCAGCAAAAAATGAG 1108 30 100.0 36 .............................. GTACATCTTCAACGGTAGTTTCCCTAAACTCTCGGA 1174 30 100.0 36 .............................. GAAACAGATCCCGATGTGTCGACGAACACGCATACG 1240 30 96.7 34 .............T................ TTTTCGCTTGCGGCGGTCAAGCCAATCTATGATG 1304 30 73.3 0 T...........T.C.CA...A.C....C. | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 98.2 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGCGCGAAGACGCCCGGAGACATGGGAGGGTTCGTCCTCATCAGCGACGCGGAGATCCAAAGGGTGCATCGAATACGCTTCTCCCCACGGAAGGAAAATATCCCCAGCCGTGGCCGCGAAGCGCACCCTAGGTCTGTAAGATATCCACAAAACTGAAAAAGGATGTAAGGGATTTTGTCGAAAAATATTTTTTGGACACCCCTGAGGGGCCGAAAAGCCTTGATAAATCAACATTTCTAGAGGGAGGTGGAGG # Right flank : CCTCTCCATCTTCGCGCGCAGGTGTGATGGGGGGCTCGTTGTTATCGCAGAGTTAGTTTAGACCACATCTCTCATGTGCTTCGTTTGCGGAGATGAAGCGTTGTGCGCAACGGATGGGCGCCTGCGGAACAGGCAGCACAGCATTCTAAGTTGGGCAAAGGCATTTCTAGTCTCACAGGTTGCCTTTCCAAGAGGCGGGAGAAAAAATAAGATGGCGGCGATTTATGTCGGCGGCATCTTTCGATCGAGGGAATCCCTTTTGAGCAGGGGATTCTTTTTTTGTGTTTCGTCCTCCGACGTTGTTTTGTGTCACTCCTTAAGAGGGGGGTGAAACAGTTAATAAATTTCTATAATTTTCCGTGAAAATCCCCACCACTTGGTGAGTGCGGTATACGCTCCTGATCCGTGAGGGTATACTGAAAATGGCCAAAAAAGGCAATAGGAAAGCAGAGGTGCCCGATTTTAGGCATCTCGTATAACCTGTCTGCCTTTTGGCTAGA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 13288-15585 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCJ01000074.1 Geobacillus sp. FW23 rawlib.basecaller_c74, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 13288 30 100.0 36 .............................. TCGCGAAGATGTTGAGAAGTATAAACAGCAAGTCGA 13354 30 100.0 37 .............................. GACGGGGGAAGTTTCGCCCACACGAAGCACGAAAAAG 13421 30 100.0 37 .............................. CAAGAAGCGATCGAGGACAAAGCAGAAAACATCGCCA 13488 30 100.0 35 .............................. TCGCTGAAACAGCTGACTCGGTACAGTGAAGCCGA 13553 30 100.0 36 .............................. ACACAACGGTACGGACATATCAGCTGACGCCGGAGC 13619 30 100.0 35 .............................. TCCACGCTTGTAGTGAAAACAACAGCCGGAACTAC 13684 30 100.0 40 .............................. GCCGAGGCCGAGGCGAAAGCGTTGGTGAAACTATTGCCCA 13754 30 100.0 39 .............................. GCATCTCGTTCCGGATGCGTGTCAGCACATTCAGCACAT 13823 30 100.0 36 .............................. AGGCTCGCTATGGCTACGACAACATCAGTGGAATAC 13889 30 100.0 36 .............................. TTATATCATCATTTGGTGATTTGTAAACATCTTTTC 13955 30 100.0 35 .............................. CAATCTCAAAAACTCGGTTGCGATCATCGAGCGAT 14020 30 100.0 38 .............................. CGTTTCCCAGCTCGAAAAAGTGGCGCAGAAGCAACAAA 14088 30 100.0 38 .............................. CTATTTCCCCAAGCGTGTGCTGGCACGCTGCAAGCATA 14156 30 100.0 38 .............................. CATTCGATATATGGACGACGTCATTGTACTGCACGAAA 14224 30 100.0 37 .............................. ACCAAACAACTCAACCAATTTTTTAAAACTAATTCCC 14291 30 100.0 36 .............................. ACCGTCTACCCATTCAACAAGAAAGGCTGTTTTTCT 14357 30 100.0 35 .............................. TAAGCGTCTGTCAATGTTTCTTGACGTTCGCTTTC 14422 30 100.0 40 .............................. TCTATGAAACCCTTCGTACCGAAGAGAAACAGCGGTACTA 14492 30 100.0 39 .............................. TGATCGCTCTGGCCGCAGTTAACTTATTAAATTTATCGA 14561 30 100.0 34 .............................. TGAAAATCAGCAGATATTGCAAAAGCTCGAGGAA 14625 30 100.0 35 .............................. TCAAAGGTTGGCGTGATTACTAACGCTGTGAGAAA 14690 30 100.0 35 .............................. TTCAGTCACTCCTTGTTCTGTAGATTCGTTTTGGC 14755 30 100.0 36 .............................. CCTCAACCACTTTAAGTGTCTTTTTGAGGTCGCCCC 14821 30 100.0 39 .............................. CGGGTTTTGTTGGTTCCGGAAAGTCGTACAATGCTACAC 14890 30 100.0 38 .............................. AAATTTTTCAATATCCCCCTAATATAGCTCCATCTCCG 14958 30 100.0 38 .............................. AAGATATTGCGATCAACGAGGCGGTCGAACTGGATAAG 15026 30 100.0 40 .............................. ACGGACGAGATGCCCGTAAACAAACCTGTTTTGGCTTTCA 15096 30 100.0 38 .............................. TCTTGTCCGGCTTCGAAGCCGAAAACCAGCCAAGATTC 15164 30 100.0 35 .............................. TCCTTTCAAATTTTGGTCAAAGACACAGACCAAAT 15229 30 100.0 36 .............................. GTGACAAACGGGCTTGCAAGTAAGAAACTAGCGATT 15295 30 100.0 36 .............................. TCTCTAGAAATAGAGGTGAAGGAAATTGCAAAACGT 15361 30 100.0 34 .............................. GCTCGAGATTTTCGATATGGTCAATCAAGTTCAT 15425 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 15492 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 15557 29 73.3 0 ......G...CG.....A..A.-GC..... | ========== ====== ====== ====== ============================== ======================================== ================== 35 30 99.1 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATGATTGTGGAATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCACGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGCGGAAAAGATCGAACAGCCGAAGAAGTCAACCCGCCTTTGCATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CCCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 9302-9932 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCJ01000077.1 Geobacillus sp. FW23 rawlib.basecaller_c77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 9302 30 100.0 35 .............................. ACGTGAACGCGCTCGCGGCATATTGTGATGCCTAT 9367 30 100.0 36 .............................. CAAGATTAGCAGGTTACACACTTGAAGAAATCGCGG 9433 30 100.0 37 .............................. CGGCACCTATAGCTGCGGACATGAAGGGCGGGTACAA 9500 30 100.0 37 .............................. TTGGATATGCTAGCAGATACGGCACATATGCAGGTAG 9567 30 100.0 39 .............................. GACGTAAGACGAGCTACGCTTCGGTGCCAAAGGCATGGC 9636 30 100.0 36 .............................. CTCGTTTGAGTAAAAGGAGGTGACAAAAGATGAAAA 9702 30 100.0 37 .............................. AGGCCGAAATGGCTCGGAGAGGAGTAATGGTGAAGGA 9769 30 100.0 36 .............................. TAAAGTGTCTGGAAGCCGTTTTTCCGCGCCTTTACC 9835 30 100.0 38 .............................. ATTTCCGAAAAAAGAAAAGACGCAGTGTCCGCGTCCTT 9903 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGTTCGACGGAAGAAAGAAAACGCAATTTTTTGACCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCGTACTACGGCGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGGTTCACGTTCATCATCGTCATCGTGTGGTGACAATGTTCAAGAATATGTATATTACAGGGTGGCTTGGCTATTACCGCCTCTGTTCTTCACCAGAACAGCTGACATTTTTATATCATGTCGGCCTAGGCAGCCGAAATTCACAAGGATTCGGCATGTTTCGCCTTAAAAGCGAATAAACGGGTCAAGAGATTGTCGTCGACCTCCAATCGTGCTAAAACCCCGGGGGATCGACGACAATGGTTTTTAGCGCCTCAAGCCTACAGCCATCAAGGTTGAAAGCCGTTGACAGAATTTTTGAAACGTGGTATGCTGAAAACAGCTCCAAACCGAAAAGCTTGATGGAACAAGCATTTTTGGGGG # Right flank : CTCACCTTTGACGATGCGCGCTAGAAAGGAGCATTCCCGTTAGGAGCTTTTCCGGGGACTTGATCAAAAAAAGCCCTCTTGGTATGATGCAGGGGTGTCAAACACATCACTCACCATACCAAGGAGGACTTCAGATGAATTGTACACAAAACTATAAAATTGATCAAGTCACCGAACAAACGCTTGTCGTGGGCATCGATATCGCGAAACGAACCCACTACGCCTGCTTCGTGGATGACCGGGGGCGTGTGCTTCGCAAATCGTTCCCGATCTTCCAGTCGAAAGAGGGCTTTCGCCAGCTGTATGAAGCGATTCAGGAGGCGATGCAAGCGTTCGGAAAGCCGCAGGTGATCGTCGCGGTGGAGCCGACCGGGCACTACTGGTTGAACCTGGCCTACTTCCTCGAGGAGCACGGGATCCCGTTGGTCATGGTCAACCCGGCGCATGTGTGCCGGTCGAAAGAACTTGATGACAACCTGCCGACGAAACACGACGCCAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 10322-13480 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCJ01000098.1 Geobacillus sp. FW23 rawlib.basecaller_c98, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 10322 30 100.0 37 .............................. TTTCATTCATCATTCTACGTACTTAGACGACGAAAAG 10389 30 100.0 36 .............................. ACATGGGCAGTCGGCAACGCGGTGACACGAAAAGAC 10455 30 100.0 39 .............................. CAACAAAGAGTCCGACGACGATACGCTTGAGATCATCGT 10524 30 100.0 36 .............................. CTTTTTGCAACGTCCGGGACCGCAAAAACGATAGGT 10590 30 100.0 34 .............................. GCAATACCTTTGAATCCAACCTTGCTGGATAAAG 10654 30 100.0 39 .............................. TTTGGTCCATGATCGAAAAGATAATAAACGGCGCCGACT 10723 30 100.0 36 .............................. TTCGTTGGATGACGTCGAGATTGTCACGGTTCCGTC 10789 30 100.0 38 .............................. GGTTCTTGTGACAGAATGCCAACTTGTACAGCGGCATT 10857 30 100.0 35 .............................. GCAGCGCCGGTTGTCGAGGTGTACCTTGCGATTGA 10922 30 100.0 38 .............................. CGGCGACAACGGGAAACGAATCATTACGGACATAATCC 10990 30 100.0 38 .............................. CACTTGTAGAGCTAGAAGGTTCCCTTCGGAATACGATG 11058 30 100.0 36 .............................. GATTGGTGAACTCCGGTCTTACCGCGGTGATGCTCC 11124 30 100.0 35 .............................. TCCGGAAGGGATTGAAAATATTCGCGCCAAGCTCA 11189 30 100.0 36 .............................. ATGCGCGTCTGAATGTCTTTTGGAACGATCAAGGAC 11255 30 100.0 35 .............................. AGTGCTTCGCGTCCTTTAAATGCGGGTGATATTTA 11320 30 100.0 36 .............................. GCATGTTGTTGGAGAACGCCGCCAGCGTCGCGTTCA 11386 30 100.0 36 .............................. CTAGTGGCGATATTAGCAATTGTACTACGTTTGGAG 11452 30 100.0 36 .............................. CTCGTCGCGAAGAGTGGATGTGCGCCCAAGCATTGT 11518 30 100.0 36 .............................. AAAATTGAAGTGTACCGTGAGGAGGTGGCTTCATCA 11584 30 100.0 38 .............................. CATCGAAGGAAACTCTTCGCAATCATTCGAAACAGTAC 11652 30 100.0 38 .............................. AAACGCAGATGGAGGCCCTATCGAAAGGAGTCAACAAC 11720 30 100.0 40 .............................. TCACGAACTAATTAAGCAAGTAAAATCAGAGCGTAGAGAG 11790 30 100.0 36 .............................. TGAAGGGGACGATGTTTTTGAGTTTACAGACGGTTT 11856 30 100.0 38 .............................. TTCATGAGCGGTGAGGATACATCCATACTCATTCCAGG 11924 30 100.0 37 .............................. AATCGGTCGGGAGCTGATCCCACGAATGAAAAAACCA 11991 30 100.0 37 .............................. CCGTTCGGCTTCACGATGATTTGCGCAGGCTTCCTGG 12058 30 100.0 36 .............................. TCAAGGAGCAGGCCGAAAAAACCGAGGAAGAGCTCG 12124 30 100.0 36 .............................. GCGATCGATACGGATGAAACGGAGGAGGAAAGCAGC 12190 30 100.0 37 .............................. AGCTTTCTTTCTGTCTCCACCATCTGTTGAGCGTACA 12257 30 100.0 37 .............................. GGCGATTCACTGCACGCACAATTCGGTTCATGTATTC 12324 30 100.0 39 .............................. GAGATGCGGTGATCAGCAAACTCAAAACAGCCTTCCCAG 12393 30 100.0 35 .............................. TCAAAAACTCATATGTCTCTTTGAGTTCTTCACGC 12458 30 100.0 34 .............................. CTACATACGCCGCTTTCCACCGCAACGCTTCCGC 12522 30 100.0 36 .............................. GTTGACTCCTCCTTTTAGTTTTGCGATTTCAATGTT 12588 30 100.0 35 .............................. AACTGACGGATAGCCAATTTTTCGAACTGAAAAAG 12653 30 100.0 35 .............................. ACACGTAACCAACAATGTTAAGTTTTCGTCAAATC 12718 30 100.0 36 .............................. ACACTCGACGACTATGACCGTCCAGCGCGAAGAGAG 12784 30 100.0 37 .............................. CATCTTTTACTTTCTCTTGGTCGGCTGGACTCATAGC 12851 30 100.0 36 .............................. AACAATTTATTGCCAGCAATCATCAAATTGCCGTTA 12917 30 100.0 36 .............................. CAGCTAGGTCCATTTGCCCAGCCATCATTTGTTGAG 12983 30 100.0 37 .............................. TAAATGTTCCCAGTAGCGCTTTTTCCGCGATCATACC 13050 30 100.0 37 .............................. AACATTCGAGGAAATGTGCAGGAAGTGGTGGCTCGTT 13117 30 100.0 39 .............................. CTCGTTGGGAGTAGGCTCTAATCCTCAAACACCTCATTC 13186 30 100.0 37 .............................. TCCGAACGTGCAGCGATCGCAAACAAACTGAATGCCG 13253 30 100.0 37 .............................. AACAATAAGGAGCGATGACTATGCCGTTGCCGAAACA 13320 30 100.0 35 .............................. CACTCCAGCGCTCCTACGGGCTTTTCCCCGCTCCC 13385 30 100.0 36 .............................. AGAAATAGAATGGGTGATTCCATGCCGCCCATAAAA 13451 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 48 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAGAGGAGGAAGCAAAACGGCGAAACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGATAAAGCAAGGGATGAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGATGTCGACACGATCCACGAACTGACCGGACTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTGCGCAAAAATCCTACAGCCATCACGGCTGAACCATATTGACAGAATTTTTGGAATGTGGTATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGGG # Right flank : CAATTAGTTTCAGAATACACTACTCTAAAACCGGTACTCATATTGTTCCAACTGTAAATTAGCACATTATTTCAGAATCCCTTTTTCAAATTATTTCGGACGGATTCGGAAATAATGTGCAAAATCTTTGCGAATTATTCCAGGTTTTGCAGATTATTTCCGAACATTTGCACATTATTTCGGATGATTAACTAGAATGAGGATGGATCGGGATGAAACATAACAGGGGCCGATCAGCCCCTGCTGTGTCAGTACCCCATTTCTTCGGCTGCCATACGCACAATGTCTTCGTCAATCATATGTTTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 6986-7886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCJ01000083.1 Geobacillus sp. FW23 rawlib.basecaller_c83, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 6986 30 100.0 34 .............................. AGCAACTGGAAAACAAAATCGAGAAGCGCTTGAC 7050 30 100.0 36 .............................. ACAAGTTATCAATGTAGTTGAGTTGCTTCTCGCTCG 7116 30 100.0 35 .............................. ATGAGGTGGAGGGGAAACTGAATGGGTCTAATGGT 7181 30 100.0 36 .............................. TCAACCGAGACCCTAGCGAAATCGAAGCGGAGATGG 7247 30 100.0 34 .............................. TCAAGTCAATACGTCACGATTGTGGTGGATGATC 7311 30 100.0 39 .............................. AAAAATGTTTTTTGCCATATCAATCGCCAACTTCATTGA 7380 30 100.0 35 .............................. GACGACGAGTTCCGCAAACGAGATGTGGAACTTGT 7445 30 100.0 35 .............................. GCAATATCGCTAGCATTGAAGTCACCTTCTCCGAC 7510 30 100.0 34 .............................. ACCAAAAATGAACGGATTTCCACCGAGGAAAAGA 7574 30 100.0 121 .............................. AGTTGTGAATATGCGTCAAGGCCATTCCTGTGCATGGAGTGAATCCTTTGACACATAGTACGATGACTGGCTTTTCATAGAAGAAGAAACAAGAATGCTTCTTCTTTACGCCAAAATAAAG 7725 30 100.0 35 .............................. TATGCAGAAACTCAGCGCATAAATCAGAGTGATTA 7790 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 7857 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 13 30 99.0 43 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGTCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 8.55 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.65, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //