Array 1 44788-39408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEQG010000014.1 Faecalibacterium longum CLA-AA-H243 NODE_14_length_59366_cov_27.778677, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 44787 33 100.0 36 ................................. ATCTCCTGCATATCGTCCTCTGAGAGACCGAGGAAG 44718 33 100.0 34 ................................. CGACTCGGGCGGCGGCAGTTACGCACAGAGCAAG 44651 33 100.0 34 ................................. TTCGTGATAACCCGCTGCGCCTCCGGCGCGATCG 44584 33 100.0 34 ................................. TCAATCATTTTGAGAACCGGCTCGAACGCACGCT 44517 33 100.0 34 ................................. ATAGGTGTTGGAGGTGTCCGCAAGCCGGACGTCG 44450 33 100.0 34 ................................. ATGTTTGGTGTCCTCCTTTGAGTATAAAAATAAG 44383 33 100.0 34 ................................. TTCCGGCAACAGCAAAAACGGCTCTCCGGCTCTC 44316 33 100.0 34 ................................. ACGCGAGAAGATGCAGCTCGTGCTGCACAGAACA 44249 33 100.0 34 ................................. TCGCGGACGGTCTGCCGCTTTTTGAGCTGGGCGG 44182 33 100.0 34 ................................. AGCAACCGTTGCGCTGCTGCCATGCCGCCCCGCT 44115 33 100.0 33 ................................. GGGCCGAAGCCGCCTTGTGGATATATCAAGGCA 44049 33 100.0 35 ................................. AGTGTCCGGGTGTGTGTGTCGTGCCTTGTGTGTGG 43981 33 100.0 35 ................................. CAAGACCAGACGTGGGTGCTGGAAATGGTAAACAA 43913 33 100.0 34 ................................. CAAACTAGACCACACAACCAGACCGATGCAGGAG 43846 33 100.0 35 ................................. TTCCATGGGCGGGGCTTGCCATTTGCCCCCCAGTC 43778 33 100.0 34 ................................. TCCCTCTGCCGGGCATCCAGCGCAGAGGGTACGC 43711 33 100.0 33 ................................. TATCTGGAATCTCTCGAAAAGAGAGGTTTTATC 43645 33 100.0 34 ................................. CTTCCTCCACCGCGATTTCTCGCAACTCGTCAAT 43578 33 100.0 34 ................................. ATTTTTGCTTGGTTTTCTTCCCGCGCCGGAAGGT 43511 33 100.0 34 ................................. CAAACTAGACCACACAACCAGACCGATGCAGGAG 43444 33 100.0 35 ................................. TTCCATGGGCGGGGCTTGCCATTTGCCCCCCAGTC 43376 33 100.0 34 ................................. TCCCTCTGCCGGGCATCCAGCGCAGAGGGTACGC 43309 33 100.0 33 ................................. TATCTGGAATCTCTCGAAAAGAGAGGTTTTATC 43243 33 100.0 34 ................................. CTTCCTCCACCGCGATTTCTCGCAACTCGTCAAT 43176 33 100.0 34 ................................. ATTTTTGCTTGGTTTTCTTCCCGCGCCGGAAGGT 43109 33 100.0 35 ................................. TGGCCGTCATCGATGGCGAGTGGTGGGACAGTTGG 43041 33 100.0 34 ................................. TTGAGGGTGTGGTAATCGCCCAGCTGGACGCCCT 42974 33 100.0 34 ................................. CTTGTATTTCGAGGTATCGACTGCAAGGGAGGTC 42907 33 100.0 34 ................................. GTCGATGGTGGCCTCTACCCGGTCAACGTCGCCG 42840 33 100.0 34 ................................. CCTTGCTGAACGCCTTGAAGACGGCGGGCAAGTT 42773 33 100.0 33 ................................. AAGTTGGCGAAGCACCAACCAGCCCGGAGACCC 42707 33 100.0 33 ................................. CCTTGGTCTTGATGCCGTGGACTGCGCCCTCCA 42641 33 100.0 34 ................................. TGGGAGTATCTGGAGTATTGCGGCCAGAAGGAGC 42574 33 100.0 34 ................................. TTCAAACGTCGTCATTTTTACACCTCATTTAATA 42507 33 100.0 33 ................................. ATGGTTTTTGTCCTCCTGTTTTGTGGTGGTGTG 42441 33 100.0 35 ................................. TGGTTTGAAAGGGCTTAGCAGCGCATTTACTGCGC 42373 33 100.0 33 ................................. CCCGGTGGGTGCAGGAGCCTCAGCAGCAGGCTC 42307 33 100.0 34 ................................. TCTACCAACTGGACGCTGACGGGGCCGTCGACGT 42240 33 100.0 34 ................................. CTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCA 42173 33 100.0 36 ................................. AGGCCCTGAAGCACCGAGGACTGTTCCGGCTTGAAC 42104 33 100.0 35 ................................. TGGAAACAGTATTTTTTGGTAAAGCTCTGCATCAC 42036 33 100.0 34 ................................. TGCGGTGCTTTCTGTGGCTTGTTTCCCGCGAGGC 41969 33 100.0 34 ................................. CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT 41902 33 100.0 34 ................................. CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT 41835 33 100.0 34 ................................. TAAGCTGAACAGCGTGATCTCTAGCATGGCGGCA 41768 33 100.0 35 ................................. TGGGCAGCACCGCAGCTTCCGGCGACACGCTGACC 41700 33 97.0 37 ....T............................ AATTCGTGACAGGCAGCTTTCCGCGTTCCAACTGGGG 41630 33 100.0 35 ................................. ATGCACCGGGAGAGCAGCACATAGACCGAATCGAA 41562 33 100.0 34 ................................. TCACCACGAGTGTAGGCAGTGAGCTTGCCCTCCC 41495 33 100.0 36 ................................. TAAGACAGCAATTTTCCCCTTGAAAAACGGGCTGGA 41426 33 100.0 34 ................................. CCTCTACACTCGTGGTCTCTGACGACGGCACGGT 41359 33 100.0 34 ................................. CGCGTCAGCGTGGAGCGCGGCGCAAGCGGCGAGG 41292 33 100.0 34 ................................. TTCTGGACGATTCTCACGAGAAGGTCGTGCTCGA 41225 33 100.0 34 ................................. TTGCGGTACATCTCAGCGGTCAAGGTGGTCTGGT 41158 33 100.0 34 ................................. CCTCCTTTACTCGCTCACTTCGGTGGCGAAACGG 41091 33 100.0 33 ................................. ATTGTGCCGCTGGAGCAGGTCATTTACTGCCGC 41025 33 100.0 35 ................................. TTGTCTGCCGTGGAAACTACCGGGGCCGCCTGCTG 40957 33 100.0 34 ................................. CACGGGAGCGCGTTGTACGCCGCTCGCGTCTCCT 40890 33 100.0 33 ................................. TCGGTGCAATAATTGACCGCGTCGTCCGGCCAC 40824 33 100.0 35 ................................. CTGAACAAGGCCGCAAAGCGCGGCACGGCCATCCA 40756 33 100.0 33 ................................. CTGTGGTTCTGGGGCATGAAGAACGCCGATGAG 40690 33 100.0 33 ................................. ATATTGTCTCTCATAAGGTTTTACCTCTCTTTC 40624 33 100.0 34 ................................. TTCACGCTCCCATAAGGGCTGCTGCGTGTGTACC 40557 33 100.0 34 ................................. TGTGTCCTGTGTTGGTACATGGTCATCGTCATAA 40490 33 100.0 34 ................................. ATCCATGCTTGGCTCAAGCTCGGTACGCTTGTAT 40423 33 100.0 34 ................................. TGCGCAAACGGAGCCGGGATGCTTATATGGGCAT 40356 33 100.0 33 ................................. ACCGCTGCGGTGGACGACAATACCGTGACCTAC 40290 33 100.0 34 ................................. ATCGACAATGTGTTGGGCGCTGACTACATCACCC 40223 33 100.0 35 ................................. TCTCCGAGGTTGAGCAGGGCGTCTGGTCCGGTGTC 40155 33 100.0 34 ................................. TTCGCCTGAACTGCTGCGGTATAAGTCTTTGCGG 40088 33 100.0 34 ................................. AGTTCAGCAGGCATTGTAGTTCCTCCTCTTACAG 40021 33 100.0 34 ................................. CACAGCCAGATCCGCCACCTTGTCCCGAACACCG 39954 33 100.0 35 ................................. CAGTCTGGTTGGTGCTTTGTCGAAGTCGGTCACAT 39886 33 100.0 34 ................................. ATCTCTTTAATGGTCATGCGCCTTTTAAGCTTCG 39819 33 97.0 36 .....................A........... TCGTATTACATTGAGCACTGACCCGAGCGTTGATTG 39750 33 87.9 211 ............A.........CA.G....... CGACACAAAAATATGGTAAACTCTTATTAAGTTGTTGCCATGCGCTCTCTAAGGAACCGAGTATTTTGACCTATAATTCCGTCTCTTAAAGACGTTAGTTAAAATCAATTTGTGTTCCCCGGTGCATTCTTCGACTTGAAGTCGCTCCTATTTGAGGGGTGTGGATAGAATAACATAATAATCATATCGCGGTTCTCAAAGGCGTAACCAA 39506 33 78.8 33 .A..T....T..A.C.......CA......... TGTCACAACCACGCCGGTCTTTTCAGCATCAAG 39440 33 78.8 0 ..T.......C...AA....TAC.......... | ========== ====== ====== ====== ================================= =================================================================================================================================================================================================================== ================== 78 33 99.2 36 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CATTTTTCTGGAAGTGAGGGATGTGTATGCTGGTCCTCATCACCTACGACGTCAACACCGAAACTCCTGCCGGGCGCAAACGTCTGCGCAAAGTCGCCAAGCGCTGTGTGGACCACGGCCAGCGGGTGCAGAACTCCGTGTTCGAGTGTCTGCTGGATGCCGCGCAGTATGCCGTTCTCAAGGCGGAGCTGATGTCTCTCATCGACCCTGCGCTGGACAGTCTGCGCTTCTACCAGCTGGGCAACAACTATAAGAACAAGGTGGAGCATATCGGCGTTCATCCGCCCTTCGAGCAGGACGGCCTGCTGTTGTTCTGAGTTTCCCGCCCCGGTGCGAAGGGCGAGTTCTCAGCATTTTTCCGGCACCTTCGCACCGGATTTTTGTGTCATTTTGCATGATTTGGATAGTTCTTTGACCCGTTGTAAATCAAGGCTCTTCTAAATTCGTGCAGAATGTTGTACAATTTGTTTGAAAATAGAGATTTTGTCTCTGTTTTTGCT # Right flank : CAGTTTCCACCTCGAATCGGGCATCGCCACAATTTTTCCAAAAAGGAGTTTTCCATGCATACCGTTTCCCTTACCCATCAGCTCGTCACCATCCAGGACGACTTTGACCTCGACAAAATCATCGAAAGCGGCCAGTGCTTCCGGCCGCAGAAACTGGCCGACGGGCGCTACCGTTTTCTTTCCGGCGGCGCACTCCTTTATCTGACTCCGCTGGGCGCTGGGCAATACGACGCTGCATGGTATGGCTCAGATTGGGAGTGCTGGGCCAACTACTTTGATTTGGGCCGGAACTATGCCGCGCTGCGGTGCAGCTTGGCGGGACAGAGCAGCTATCTGGACAAATCGCTCGAATTTGGGCAGGGCATCCGAATCCTGCATCAGGACCCATGGGAAATGCTCATCACCTTTCTTATCTCCCAGCGCAAGAGCATTCCGGCCATCCGCACCGCCGTAGAACGCCTTGCCCGGTGCTGCGGCGAACCGCTCAGTGCCGAAGGCGA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 66110-66470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEQG010000006.1 Faecalibacterium longum CLA-AA-H243 NODE_6_length_100869_cov_33.192198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 66110 32 100.0 32 ................................ AAAGGGCAAATCCAATGAATCGTCAATCACAG 66174 32 100.0 35 ................................ TTCACATCAATCGGCTCGCCGCACAACTTGCACCG 66241 32 96.9 34 ...A............................ TTGACGAAGTTAATGGTGTGGGGCGTACAATTCA 66307 32 96.9 34 ...A............................ TCGTTTCTGTCAACGTATACGATATACTTGCGAG 66373 32 100.0 34 ................................ CTCATAATTTTGCTGTCGATAATGTTGTTGCTGA 66439 32 87.5 0 ........................G.A.A..A | ========== ====== ====== ====== ================================ =================================== ================== 6 32 96.9 34 ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Left flank : CGGCACGGTGGTCGATCTTGCCTTCCCTGCCATCGACCCCGCCGCCGACGAGGCCGCACTGGACTCCCTTGCCACGGTATACGCCGACCACATCCTGCACCTTAACCCGGACGCCGTGCTCTGTCAGGGCGAGTGCACCTTTGTGTACCGGGTAGTCCAGCGTCTGGAAGCCGCGGGCATCCCCACGCTGGCCGCCTGCTCCCGCCGCAAGAGTCAGGAGACCACCTACCCGGACGGCAGCACCCTGAAGCGCAGCATTTTTGTGTTTGCCGGGTTCCGGCGCTATGGCCCGATGCCCTGAAGTCAACAGTTCGGGGGGCGAACCTCCTTTTCTACCGCCTAGTTTTCCCCAATCTGGCACAGGGTTCGCACCACCAATTTCCAACTTTTATTCGGAAATATCTTTTATTTTTGCAGTCAATGTGCTATATTTATCTTGTGATTGCAGAACACGCCTTAAAAAACGCAGGAAAAGAGTTTCTTTTTGGGGCAGTTCTGCT # Right flank : ACTCCGCATCAAAAAAAGATGCGGAGTTTTTCTTTTGCAAACCTTAACTCTTTGTTTTCCGTGGGCTGTCCCTCTATGAACGGAACGATTGCAGCTGCTGTGATATTTTCTCTGCTGCGGCTTTTGCATAGCGACAAAATGTGTTATAATAAAGCCAATTCCAAGCATCTCTTACAAAATTGACAAATACACTTTCCGTTTATTGTGCAATTCTTCCATAACCCATAAAGGAGATGGTATTTTGAACGTTCTCACCCTGCAGTCCACCTATGGCGGGCTGCTGCACGACACCGGAAAAGCGGTGTACCGTGCCGGTGGGCAGCGCGGCAGCCACAGTGAACAGGGCTACCAGTTTTTGCACGGCGTTTTGCCCGGTGCAGGCTGGTCACCGGCGCTGGACTGTGTGCGCTACCACCACGCCGCCGCGCTGCGCGGTGCAGCAAAGGCTCTGCCGGCCGATTCCCCGGCCTATATCGTTTATCTGGCAGATGATCTTTCTG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGCTTATCCCCGCAAGGGGACGATAAC # Alternate repeat : ATTACAGCTTATCCCCGCAAGGGGACGATAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //