Array 1 274604-274149 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABVEU010000004.1 Faecalibacterium prausnitzii strain P9239, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 274603 28 92.9 33 ............T.T............. GGTAAAGGAGCAACAGGCGTTGGCTATCGAGAA 274542 28 100.0 33 ............................ CGGAGGGAACGACATGGAGTTCAAGAACGTGGA 274481 28 100.0 33 ............................ TGCGCCCGGTGGCGGGGCGCTGTCCGTGGGTGG 274420 28 100.0 33 ............................ TCGGCTCATCATGGAGCTGTGCATTGCCACGGG 274359 28 92.9 33 .C..........T............... CTATGTGGTTCTGTACCAGATGCTCTGCCTTAT 274298 28 96.4 33 ..............T............. TCTGAGTATTCAGGGACATAATTTAGCCCTCCT 274237 28 92.9 33 ............T.T............. CATCTGGCTGAATGGTCTGGTCGGCGCAGGCTA 274176 28 71.4 0 ...........ATGT........TCCA. | ========== ====== ====== ====== ============================ ================================= ================== 8 28 93.3 33 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : GGGAGAAAAACTGTACCTGCTTCTGCTCAGTGAGGAGCGGCCGGACCTGACCGCCCTGTGTGCGCAGTTCGGCACTGGCGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGGGGCACCCTGAAACCCTGCTATCTCGAGGTGGAGCAGGAGGAATGGCTGTGGGCGCAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAAGGGGCGTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGCCTGTTACCCTGCTGGCTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATCATCCACAGGAGAGAAGCGCCCTGAA # Right flank : ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAAACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGCGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCGG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : CTTTTCCCCGCCTATGCGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.91 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], //