Array 1 233319-229574 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGYX010000004.1 Klebsiella pneumoniae strain 4928STDY7071696, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 233318 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 233259 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 233198 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 233137 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 233076 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 233015 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 232954 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 232893 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 232832 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 232771 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 232710 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 232649 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 232588 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 232527 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 232466 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 232405 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 232344 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 232283 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 232222 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 232161 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 232100 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 232039 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 231978 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 231917 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 231856 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 231795 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 231734 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 231673 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 231612 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 231551 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 231490 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 231429 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 231368 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 231307 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 231246 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 231185 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 231124 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 231063 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 231002 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 230941 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 230880 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 230819 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 230758 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 230697 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 230636 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 230575 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 230514 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 230453 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 230392 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 230331 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 230270 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 230209 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 230148 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 230087 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 230026 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 229965 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 229904 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 229843 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 229782 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 229721 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 229660 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 229602 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //