Array 1 686-860 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================= ================== 686 28 100.0 34 ............................ CGGCAGGCCGCGAGATCCCCCTCCGCCTCGACAT 748 28 100.0 57 ............................ CCAGCGGCGGGCCGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTCCCAGGG 833 28 85.7 0 ....................C.A..G.T | ========== ====== ====== ====== ============================ ========================================================= ================== 3 28 95.2 46 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CCGGGTCTCGGCCTCCCGCTGCTCGGCTGTCGCGATCGCCTTGTCGATCCGGGCCAGCCACATCGCGTGCCACATCCGCAGCACATGCAGGCACGGCAGGTCGGCGGGCAGATCGGACATGCGTTCGAGTCTAGGTATGTCGGGGCCGACGGCGTGCGGCCCCCCCCTGCTTGACTTCGAAACGCCGCCTTCCCTCCCCCATCAATCCTCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAAATCTCGCTCGCGACGGTCCTCGCCCTGGCACTGTGCGGCCGGCGGGCCCACTGGGTACTGGGCGCACGGCAGTTGCCCACCGAGGCACATGCGTGGGTATGGACCGAGAACGGCGCATTCGGGCTGTCCGGCCGCGACCACCCCGACCCCCGCCGCCCCTGGGCCGGCGCCCTCGCCGCACCTCCCGTGCCGAAAGGGCGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : TGCAACAGGGCTCTGGGTGGGTACGCAGTCAGACGTGCGGCTGGTCATCTGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTTAAGTGGGCAGGTGCGGTGGGCAGCGGCGGTCTCCGGGCTGCACGGGCTGCCGCACCGGTCGCAGACCCCGCGCACCTCCTGCGGGCAGCAGGGGCAGGTGCAGCGGTTTCGGACAGCGGGCACGCTGTAGCCACCGATGTACCAGTCGGTGTTGCCGCAGCAGAAGCCGCATTCGCCGATGCGGCACGGTGCGCACAGGCCGCTCACGACCGGGCCTCCGCGCAGGCAGGGCAGGCGCGCGGGAACCACGAAGCCCACGGGCACTGCGGGTCCGGGCGCACGCCGAGGTCCACGGCCGTGGCGGTATCGAGGCGCCCGGCGCACCACACGCACTCGGTGCCCCGGAGCTGCAGCTCAACGAGAGCGGTCGGCTGCGGTAACTCCTGCACTGTCGTCGCCATGGTCATCCCCTGCTGTC # Questionable array : NO Score: 4.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.89, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 939355-939148 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ======================================== ================== 939354 23 95.7 39 .............T......... TCAGTGACCGGTGGTTGAGGCCGCATCTCAGCCGAATCC 939292 23 95.7 40 ..............C........ TCGGTAACAGGCGTGTGGGCTCGGAGATCAGCCGAAACTC 939229 23 100.0 36 ....................... CCTTCGGAGCCTGGCCGGCGTTTGAGGTCATCTTCG 939170 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ======================================== ================== 4 23 97.8 39 AGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCTCCGCGGGGCGGCCTCGGTGACCGCCGGGACCCCCAACCTGCGGCCCGCCCCCCGAACAAGGCCAACTTCTTTGCCGAACCGGCAACCCTTGCCCTCACACGCCGGGCAGGCTCAATGGCCTCAAACGCCGGCCGGGCTTCGGGGGTGGTGGCCTCAAGCGCCGGCCGGGCTCCAGGGGTGGCCTCAAGCGCCGGCCGGGCTCCAGGGGTGGCCTCAAGTGCTGGCCCGGCTCCAGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTGTGCGGGTCCGGCTCCGGGTGCTGCTTCAGGATGGCTCAAGCGCCGGCCGGGCTCAGGGGTGGCCTCAGACGCCGGCCGGGCTGAGGGGGGAGCGGGCTGGCGTTCAGGGGCTGTGGGGAACCGGTGCTTGGGGCCGGAGAGCAGCTCAAACTC # Right flank : CCGAGCCCGGCCCAGAGGCGGCGTGAGGATCAGGCGGCGACCAGCCGCCCACCCGCCCCGGCCTCGCGATAGCGCCGCAGCACCAGCCGCGCCACCTCGGGCGCAGCCCCGAGCACGGGCGCCAGGACATCCGCCCCGGCGGCCCCCGCCGCGATCCGGTCCGGCAGCCGCCCGGGCGCCAGAACGTAGGGCGCGACCACCACCCGACGCGCGCCCCCGGCGCGCATCGCGGCGACCGCGTCCTCGGTCCGGGGACGCCCGGGACCGCAGGCGGAGGCGAACGCAGGCCGCACGGCGCACCAACCGGTACGCCGCCACTCCCGCGCGATCTCTGCGATCACTGCGATCGCCTCCGCGTCTGAGGAGCCCGCCGAGGCCAGCACGACCCCGGTCGAGCCACGCTGCCCCAGCTCCACCCCGGCCTCCCCGAGCCGCCGCTCCAACGCCGCGACCAGCAGCGGGGACGGGCCGAGCACCCCGGCCTGCCGCACGCGCAGCAG # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 3 2106159-2106308 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ====================================== ================== 2106159 25 100.0 38 ......................... CTCGGTAACCGGCACAGGAAGACCACCCCCGCCGAATC 2106222 25 100.0 37 ......................... TCTTTGACCAGCACGGTCACGACGAACCGCGCCCCCT 2106284 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ====================================== ================== 3 25 100.0 38 CCAGCCCGGCCGGCGCTTGAGGCCA # Left flank : GTATATGGTGCTGATCACATCTATTGCCACGGAACGCCTCCGGCGCGGGCCCGTCACGCCGACACGCCGCGAAGGGGTACGGGTTCCACCCGGGCGGACGCGCCTCCCCCACCGACTGGGCCCGCCTCAGACGCCGGCCGGGCTGTGAGGGCTTGGCTGCGGCTTCTGCCGCGGGCCAGAGGTGGCCTCAAGCGCCGGCCGGGCTGGAATTTGGCTGGGCTCCGGCCTTCGGCCGCGGCTCAGGGATGGCCTCAAACGCCGGCCGGGCTGGAATTTGGCCCGGCTCCGTCCTTCGGCCGCGGCTCAGAGATGGCCTCAAACGCCGGCCGGGCTGGAGTTTGGCTGGGCTGACTTTGGCCGGGAGTGGGCCGGGTGGGGTGGTTCGGTGACGCGACTGGAGAACAGAAGGGCCCCGGTGGGCTGGGCCGTCGGGGTCCTTCGGTCGTTCGGTGGGGCTGTTGTTGTGAGGCGGGATGTCGGGGGTGGGCCCCACACCCACT # Right flank : ATCCTTGACCGGCACGGTCACCACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAGGGCGGGCGGGTTGTCCACGCACACCCCCCACGTTGAGCGGAGTTTCCCGCCTCCCCGCTCGCCAGGGCGACCCCGTCGCCCTACTCTCCGAAGGAGCGGTCAAGCGCGGCGAAGGGTGACACGGTGCGGGCGGACCTGATCCTGCCGATCCTGGTGCTGGCAGCCGCACTGACCGCCGCCGTGTACACGTACCGCCGGCGCAGACGCCGGGTCAGCACCCGCACCACCCCGGCGGGGACCGAGATATGGGGAGCGGGCGGCGACACCCGCACCCCGGTGCTCTCCCCGGCGGAGGCCCTGGAGCAGGCGGAGGACGCGATCCGGATCAGGGCGGCCCAGGTGGCGGCCGCCTCCCCCGACGCCCCGCC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 4 2777127-2777398 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 2777127 27 100.0 34 ........................... CCAGTTGGCACCGCCGCACGATGATCACAACCCA 2777188 27 100.0 34 ........................... CCGCCGAGGGGTTGTGGATGAGGCCGCCGCGCTG 2777249 27 100.0 34 ........................... CCTTCGGGCTCGCCACCTCGACCGCGAGCACAGT 2777310 27 100.0 34 ........................... CCTCGTCGAGGGTGGCGTTCAGGACCGTGACGAT 2777371 27 100.0 0 ........................... | T [2777396] ========== ====== ====== ====== =========================== ================================== ================== 5 27 100.0 34 CTGCTCCCCGCGCGTGCGGGGTTGGTC # Left flank : GCGATGAGCCTGCTCCGAGCAATGGACATGCCGCTCTCGCCACGCGAGGTGCGGGTGCTGAGCAGGGCCGCGCAGGGGGATTCGGTGGCGGAGATCGCCCGGGGGTTGTGCCTGTCGCACGGGACGGTGCGGAACTACATCGCTTCGGCTACGCGGAAGGTGGGGGCGAGGAACCGGGTGGATGCGATTCGGATCAGCCGGGCGGCGGGGTGGGTTTGAGGGGGTGGGGTTGAGGGGGCTGGTGGGGGCTTGGGTGGTACGGGGGTGGGGTTGGGACTTGGCGGGTGGGGTGGGGGGTTGGGTCGGGTGAGGCTGAGGAGTGGGGTCGGGGTGTGAGTGGCTGGAAGGGAGGGGTTCGCGGGAGATCTGTCGGGTTCAATGGGGGGCGGGTGCTGGGTGGACACCATGTAGGGGGTATGAGGCATTCACCCGCATTGCCGGAATCTTTGAAGCTTGCGGGAGAGAGTGACTGGGCTGAGTGAAACCCCAGGTCAGCGAGA # Right flank : CCCTCCCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCCCCGGCTCCCCATCGCCGAAGGCTCCCCCAGCCCCGCCGCCAGTTCCCCGTACAAGGCCGACTCACGAAGGAGCGAGGCGTGGGTCCCCAGGTATGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACTGTGATGACCGTGGCCGGGTGGGAAGCGAAGGCCAGCTCGGTCGCAGCCCGTGCCCCTGCGTCCAGGTGGGCCGTGGGCTCGTCCAGGAGGAGCAGGGGCGTAGGTGTCAGCCAAGCCCGGGCCAAAGCAATGCGGCGGCGTTCGGACGGGGTGAGGTGGTCCGGGCGGAGAGGGCGGGCGGGGTCAGCGGCGAGGGGGGCCAGGGTGAAGGTGTCGATGGCTTCCGTGATGCGAGGGGCCGGGGCGTTCGGGGCGAGGTAGGTGAGGTTGTCGTGGAGAGGGGCCTCGAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGTTGGTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 4432705-4432493 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4432704 29 93.1 32 .............GT.............. ATCTACGGGATCGCGGCCGAACGGGACCGGAC 4432643 29 100.0 32 ............................. TGGGTGGCGTCGATCTCCATGAGCACTTCGGC 4432582 29 96.6 32 .........................T... GAGGCCGCTCCGGTCGTCACGAACATCATCGA 4432521 29 86.2 0 ..............G......CAA..... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 GTGGTCCCCGCGCACGCGGGGGTGGCCCC # Left flank : GCAAGCCCACACCGCGCCCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCATGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGACTCAAGGCGAGGTGGGCATTTTGGGGCGAATGTCGCTATCGGCGAAGCTTGCGGAAACTGGGGCAGGGGCGCCGTAAACCTGCCGGCCAGGGAGA # Right flank : ACCCCGCCTCACCCCGACCCGGCGCCCAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAAAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGTGGGAGTGCGCGCGGGCTGGCCAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGC # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5108785-5108937 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPN02000002.1 Streptomyces sp. SM8 Scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 5108785 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCACAACC 5108850 24 100.0 40 ........................ TCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 5108914 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCAGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCCGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTAACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATGGCGCCGGCATCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCCCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCACCGAGAGGCAACTGGCCGACCGCCGAAAAA # Right flank : ACCCCACCGCACCCCCGCCGGGGAGGGAAGACTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGAGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCAAGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCGAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //