Array 1 91-554 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UEWP01000006.1 Haemophilus influenzae isolate PTHi-9437, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=====================================	===================================	==================
        91	    37	 100.0	    34	.....................................	CAAATAATCATCATATCTAGCCGACCAATCTATA 	
       162	    37	 100.0	    34	.....................................	ATAAAATCTCCTATGTAAGATAAGCACATTGCTA 	
       233	    37	 100.0	    32	.....................................	CATTACGCCCTGTCATACGTTGCATAGTCATC   	
       302	    37	 100.0	    35	.....................................	AACAACCTTTAACGCAACTTTGCGTAAAGCTTCAT	
       374	    37	 100.0	    35	.....................................	CCCAATCGCTGTCTACTGTATTTACTGTTTTAGTT	
       446	    37	 100.0	    35	.....................................	AATACAAAAACAAGGTATTTGATGTGATAAGAATT	
       518	    37	 100.0	     0	.....................................	|                                  	
==========	======	======	======	=====================================	===================================	==================
         7	    37	 100.0	    34	GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC	                                   	       

# Left flank :   CAAATCAATACCTAACTCTTCAGATATCAGAAAAAGTTGGAAAGTGGCTCTGGGAAGCCTTGCCACACAAGGCTCTAACACCCCACTGCAG
# Right flank :  CGAATGGGAAGTATTATAATTTTTACTAACTAAACGAGGAAAACAAAATGAGAAAAATCGAACAAAAAATGCTAGATTGTATCCAATTTGGGCATAATTTCAAACTAGGGAATACCAAGGTTTTATGGCACAACGGAGAGCTAAGGGTCTATTTGCATGATTATTGCATAATTCATAAAGTAAAAAATAAAATCACGCTAAAAAAGGGGCAAATTCTAGGAAATGGTGAACCTTTCATCTTTAAAACTCTTTTTAAGTTTGATCACAAGGTTTAAAAATGGGGGTTACTTTTAATGATAATTTTTAAAATTTGGATCGTTGGTTTCTTTTCGTTTTATCTTTTGCTTTATTTATGGGCTAGAAATGAAAGAAAAAAGCCCGATCCTATATTTGACAAAATAAAAGTGGTTTACCCGATCGTCAAGATTAAAACAAATTTATTTTATTTTAATGGTGCATATATCACGCCCGATCTGATAATCTACAAAACGCAAAAAATA

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGAAAGACATTGCCCTGTTCCAAAGGGATTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.35%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-3.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.37,0.27   Confidence: LOW] 

# Array family : NA
//