Array 1 48697-44458 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXNS01000002.1 Halomonas nitroreducens strain 11S NODE_2_length_383101_cov_49.009209, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 48696 29 100.0 32 ............................. TTGATCCCGGTAGCCGTCTCAATCTCGCGAAA 48635 29 100.0 32 ............................. AGGAATATCAGGACGGCGCGACCGCCTCTGTC 48574 29 100.0 32 ............................. GCCGGTAACGTCATGGGTGAGGCCGGGCAGAG 48513 29 100.0 32 ............................. GCCGAGCACCTAATCCGCCTGCGCGGATCCGA 48452 29 100.0 32 ............................. CGATGGCCGTTCTGATGGGGGAACTGGGCGCC 48391 29 100.0 32 ............................. CGATGACGATGCGCTGGCCTGCCAGCACTGCG 48330 29 100.0 32 ............................. TACCACGTCCGGCTAAAGGGCGCATGGGTGGA 48269 29 100.0 33 ............................. GAAAGCCTCGACCTGCTCAACGAGAGTGTCAGG 48207 29 100.0 32 ............................. CTACCAGTATTTTCATTTCATTTCCCCCTGTT 48146 29 100.0 32 ............................. GCGTAACGTCGAGCGTACCGTGGTACTTGATG 48085 29 100.0 32 ............................. TCCGCTAAAGACTCTGCCTTTCAACTCGGCGC 48024 29 100.0 32 ............................. AGTTCATCGTGATGTTTGCCGACTGGTACGCT 47963 29 100.0 32 ............................. GCACCTATGACAATTGCATCATCACGAACACG 47902 29 100.0 32 ............................. CCTTCATGGGATGATGCGCCAGAGTGGGCGGA 47841 29 100.0 32 ............................. TGGTCACGGTGAGAGGGCTCCCATCGATGGCA 47780 29 100.0 32 ............................. GCCTCTTGGCGGGTAGCTATCTCGGTGTCCTG 47719 29 100.0 32 ............................. CAGCAGGGGCGGGCGCGAACCCATGCGAGATA 47658 29 100.0 32 ............................. GAGGATGCCGAGTGACCACTCGCACCGAACGC 47597 29 100.0 32 ............................. GTATCATGCCCAAGCTTGGTCCGATTGCCGCC 47536 29 100.0 32 ............................. TAGACAGCACGCAGGGACTTCCCGGAGCCAGG 47475 29 100.0 32 ............................. GTGTCTCCCTGGTCGAGCAGTGCGGCGATCTC 47414 29 100.0 32 ............................. CTCTCTCAGGGATTGCTCAGCCAGCCGTTGAA 47353 29 100.0 32 ............................. TGGCGGCGCCAGGTGGAGAAGGACCTGCGCCG 47292 29 96.6 32 ............................A GCGTAATCACAGCAAAATACCCCCGACAGTCC 47231 29 100.0 32 ............................. GCGTCAGGCAGTGGCGTTACCGTGTCGCCCGT 47170 29 100.0 32 ............................. CTCCACATCCTGCTGAGGGCGACTCATGTCAA 47109 29 100.0 32 ............................. TTTGGGCCGGTCCCGCTGGGTGTAGACAAGGC 47048 29 96.6 32 .C........................... CGTTGGTCCTGAATCACGTCGGGGTTGGTGTC 46987 29 100.0 32 ............................. AAACCCCTCGAGGTAGCCATCAATCTGTTTAT 46926 29 100.0 32 ............................. GCGCAGGAGGCACGTCATGCCCAACAGCCAAA 46865 29 100.0 32 ............................. GCCTGGCTGAGGCCCATCTCGCTGGTCCAGCC 46804 29 100.0 32 ............................. TTCGCGAGCCTGAGAAATATAGTTTTTAATGG 46743 29 100.0 32 ............................. CAGGTAAAAGAGATGGCGGCCCGGGAGGGCGT 46682 29 100.0 32 ............................. TGATTTCGCCGCTGGTCGGGTCCTCGGTCCAC 46621 29 100.0 32 ............................. GTGAATCCCAAGTACGACGGCAGCGACCCACG 46560 29 100.0 32 ............................. GATGAGCCGTATCGCCGAGCTGATGCCCCTTT 46499 29 100.0 32 ............................. GAGCTAGAAAGGGATGGTAAGGGTCGAGATCA 46438 29 100.0 32 ............................. TCCACCTCTTGCGCCATCTCAGCCGGGGTCAG 46377 29 100.0 32 ............................. AACTGAAACTGACGGATACCCCAGGTCGCCGA 46316 29 100.0 32 ............................. ACGGCGCGGCGCTGGGCACGCGGCCAGCAGCG 46255 29 100.0 32 ............................. ACCGAGGTCAATGCGCTGGTGCGGCACTACCT 46194 29 100.0 32 ............................. GCCCCTCCGGAGAGGGGCCCATGGCAGGGATG 46133 29 100.0 32 ............................. TCTTCAACCTGGTGCCCGAGCCCGCCGTGGCG 46072 29 100.0 32 ............................. GTGGTTGGGGCACCGACGATGGTGTGCCCCAC 46011 29 100.0 32 ............................. GGCACGGACAGTGCCGGGTAGCCGGCCTGCCA 45950 29 100.0 32 ............................. CCTTCGTTCAACCACATGGAGGGTCAGCCATG 45889 29 100.0 32 ............................. GGCGTGCAGATCCCCTGGACCGGCGAGGACAT 45828 29 100.0 32 ............................. CTCACGGCGCAGGCTAGTGAAAGCATCGGGGG 45767 29 100.0 32 ............................. GCCGCCGGCCTGCTGGCCGCCGAGATTACCGC 45706 29 100.0 32 ............................. ATCCAGGCCGAGCACAGCACGGGCGGCAGCCG 45645 29 100.0 32 ............................. GACATGTCACCGGCGCTCGACATCCTCGAGGC 45584 29 100.0 32 ............................. CCGTCGCGCGGGTCGGCGCGCAGCTGGGCGCC 45523 29 100.0 32 ............................. GGCACGAGCAACAGCGGGGCAGCACCATACTC 45462 29 100.0 32 ............................. TTGACGATGGCCGCCCGGCCCACGGCCAGGCT 45401 29 100.0 32 ............................. ACGTCGCCGGCCAGACTGAGGCGCTGGGATTC 45340 29 100.0 32 ............................. ACTCCGCCACCGAATACCTAGCCCCTCTTTCT 45279 29 100.0 32 ............................. CCATGAATGCCCTCTCCCTGATGGCACGCCCT 45218 29 100.0 32 ............................. CCCAGCCCCTCCAGCCACCGGACGATGCCGGG 45157 29 100.0 32 ............................. CCATCAATACCCGACACCTGGGTGGCGCCACT 45096 29 100.0 32 ............................. GTGTTTTCCCCGATGCCGCCCAGCCTGATGGC 45035 29 100.0 32 ............................. CCCCTGGTCGATGAATCGAAGAACAGGCGTCC 44974 29 100.0 32 ............................. GTGCGGGAATGCCCGTTGATCCAGTCGCCATG 44913 29 100.0 32 ............................. CACGGGGCCTACTACTACCGGCCCCGGGAGAA 44852 29 100.0 32 ............................. TCCTCGAGGCGGTTGCCCTCGTTGTCCATGGG 44791 29 100.0 32 ............................. ATGGCTAGCATGGCCAATCCGCGACAGTGATG 44730 29 100.0 32 ............................. CAGCTAGAGGAGGTCATCGAATGATGAGAAGC 44669 29 96.6 32 ....C........................ TTAGGGGGTGGTGTAACTCCAGTTATGTGATC 44608 29 100.0 32 ............................. GTCCGAACCGAAGACCTGGAGGTATTCGCCTA 44547 29 100.0 32 ............................. GATGAGCGAGCGACAGGCGGGATATTACTGGA 44486 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 70 29 99.8 32 CTGGTCCCCGCAGGTGCGGGGATGACCCG # Left flank : GGCGAAATATCCCCACCGCTCCCAGCGCCCGAGGCCATGCCGCCGGCCATTCCCGAGCCGGAGTCTGTTGGCGACCAGGGGCACCGGAGCAAGTGATATGGCGATGCTGGTCGTGGTGACTGAGGCGGTGCCGCCGCGCTTGCGCGGCAGGTTAGCCGTCTGGCTGCTGGAGATTCGCGCCGGTGTATACGTCGGCGATGTCACCAAGCGCGTACGCGAAACGATCTGGGAACAGATCAATGCCCTGGCTGAGGACGGTAATGTCGCCATGGCCTGGGCCAGCAACCATGAGTCCGGCTTCGAATTCCAGACTTACGGGGTCAACCGGCGCGAGCCGATCGACCATGATGGTCTACGGCTGGTGCGTTTTCTGCCGCCAAAGCCAACTAACTGATTTTTCATGTTCTTTAACAATGTAGTCTGGTTGAAAAGTAAGCAAAATCGCTGGTGGAAAATTCACTGGCGATTTTCTTCATTGTAAACAGTTATCTACAATTAGA # Right flank : GTCGGGGGCGGCAGCGACTTTTTGACGCCTTTCCTTCGACACTACGATCATCCGGCACCCTGCAACTAATGGCTGAACGCGGCTTTACAGGTTCGGCGCTTACGCAATTTGGCGTGTTATACAATACCGAATCTGAAACTTTCCCCCTGTGCGACTCGAAGGGGTGACACGAGACTTATGAGCACAACACCGAGGGGCCTAGAGGTTGCCGAGGCGTACCAACTACTGCGAGATTATGTTGACCGTTACCAGCGCCAGCATGGACACCGACCGGCCACTGTGTCGAAAGGTCGGGTTGGTCGTGGTTTGTTGTTGCTATCGCATGGAACCCATACGGAACCCACAGCGATACAAACGAAAAACCGCCACCCGGCATGATCCGTAAGTGGCGGTTTCTCTTGGTGTTCATGGTCGGAGCGACAGGATTCGAACCTGCGACCTTTGCAACCCCATTGCAACGCGCTACCAAGCTGCGCCACGCTCCGACGTCCTCATTTTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCAGGTGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //