Array 1 761648-761964 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079898.1 Acinetobacter septicus strain FDAARGOS_1401 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 761648 26 100.0 34 .......................... TATCGCAAAGGAGATGCATCAAGTAAGTATTGGT 761708 26 100.0 34 .......................... TTCCCATTGCGCCCCTGCAATAGAATAGAAACGT 761768 26 100.0 25 .......................... GCCTGATGATGAAGCAGGTTTTGGT Deletion [761819] 761819 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 761879 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 761939 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 6 26 95.5 32 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCACTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAAAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATACTTTAACTTGTTTTTAAAGCATAATATCAAATTATTAAAATAACTTATTGTTATTAAATTATTTATTAATAAGAGTTTATAGT # Right flank : TCGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAAAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAACCCCTTTCATTTTGCCTATGCGAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAAGGTAGAACTCGAAAAAGCCTATCGTTTACTTAATCATGGCCCTACTGTACTGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3448170-3453538 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079898.1 Acinetobacter septicus strain FDAARGOS_1401 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3448170 28 100.0 32 ............................ AGTTAGTCTTTTGGGTGGAGGGAATCCAAATC 3448230 28 100.0 32 ............................ ATGCGCTGAGAACGTGCCAACGGCGATACAAA 3448290 28 100.0 32 ............................ TGCAAGTCAATAGCAACTTGTGTGTAATGATC 3448350 28 100.0 32 ............................ AATGGTTAATGAAAATAAAATCACGGCGGCGT 3448410 28 100.0 32 ............................ TGGCACTTGTGTTTTTCGAGTAGCCATAAAAA 3448470 28 100.0 32 ............................ ATTAACATCTGCATGACCATAATTCTCTAAGC 3448530 28 100.0 32 ............................ AATGCAGCTTTAGACAATGAAGCCGCAATTCA 3448590 28 100.0 32 ............................ AATGGAAGGAAAAATATTGGGATGAAAATCGC 3448650 28 100.0 32 ............................ GCCCTTAGACTCAACAATCTCAACAGACTCAA 3448710 28 100.0 32 ............................ AGAACGCAATGCCAAGCCAAAACACCGATCTA 3448770 28 100.0 32 ............................ GAACGGCTCAACAGATATTCAATCATTACTTC 3448830 28 100.0 32 ............................ ATGCGCTGTGCCACGTTTGCGCCGCTTACCCA 3448890 28 100.0 32 ............................ TTTTCCGCCGCTGCTGCTGCATCGGCTTCTGG 3448950 28 100.0 32 ............................ TTGAGTCGGACGTTGATGAATCCCACGAAAAT 3449010 28 100.0 32 ............................ GTGGACGATTCCAGATGCGGGGGTTCGTACTG 3449070 28 100.0 32 ............................ TAGAAAATCAAAAGGTGCGGGGCAGATCAATA 3449130 28 100.0 32 ............................ GTATGGGTGTATTCAATGATTAGTGGGTGCGT 3449190 28 100.0 32 ............................ ATCTCTACTTACTTCAATTATTCCATCGATTA 3449250 28 100.0 32 ............................ TCAGCCATTACACTTAGATAAATGGAACGGCA 3449310 28 100.0 32 ............................ ATAAAACCACAAATTTATAAATCATTTTATGA 3449370 28 100.0 32 ............................ TCATCTCAAGAAGACATTGATGCTTCTTATTT 3449430 28 100.0 32 ............................ AATGCGAATGCTGCGGGTTCAGGCATTGATGT 3449490 28 100.0 32 ............................ GTAGTTGAGAAAAACGGAAAAACTTCACTTGC 3449550 28 100.0 32 ............................ TTGAATGGGTAGAAATGCCCACTGTGTTACCG 3449610 28 100.0 32 ............................ ATCAACTTAACTTCCGTGATCTGATCGTCATC 3449670 28 100.0 32 ............................ TTAGTGATTGCATGTACCAAGCCAAAAAAGGC 3449730 28 100.0 32 ............................ AATTAGTCAAATATTCAGTTGAAGCTCAAGAT 3449790 28 100.0 32 ............................ TAAACACGTTTATAACTTGTATAAATCCACCA 3449850 28 100.0 32 ............................ AGACTATCGCAGTAGCAACATATCCAAAAATA 3449910 28 100.0 32 ............................ AGAACCTGGAGTCGCTGACAGAAAGTTAATCA 3449970 28 100.0 32 ............................ TTGATGTGACTTACTCGGCACGTTTTAGAAAT 3450030 28 100.0 32 ............................ TAAGTTATTTAGCATGATTGATCTTGGTGCTG 3450090 28 100.0 32 ............................ ATGGGTGATGAAGCGAAAAAGATTGATGACGA 3450150 28 100.0 32 ............................ TCCACATAACACATCTTGCACATATCAATGGG 3450210 28 100.0 32 ............................ ATTTAATAAAACATCTGTTGCTATACTTTCTG 3450270 28 100.0 32 ............................ CATTCTTTTTACGAATAGTTTTTAATTCATCT 3450330 28 100.0 32 ............................ ATGCGCCATTGAGAAGCGTTAGGGCCTTGAAG 3450390 28 100.0 32 ............................ AAGAAGAAGATCGACTGGTTTATTTGAGTAGA 3450450 28 100.0 32 ............................ GAATAACCCTAAATACGCTTCATGTCTACCAT 3450510 28 100.0 32 ............................ TCAAAGATAGAATCTGACAAATAAGCAATTTG 3450570 28 100.0 32 ............................ CAGCGATTTAATAAATAAACTGCTGCGTACTT 3450630 28 100.0 32 ............................ AAACTTTAATGCTAAAGGAGCGAGTTGTTCCT 3450690 28 100.0 32 ............................ TGACCGTTTACACGCTCAGGGTTTAGCCTTCG 3450750 28 100.0 32 ............................ AACCGCATCTACAACTGGAATACCTGCATTAA 3450810 28 100.0 32 ............................ ACGATCAACCAATATCACACGACCACTAGCTG 3450870 28 100.0 32 ............................ TTTATAATATCATTTTGGTTAGTACCACCCGA 3450930 28 100.0 32 ............................ TAATGGTGAGCGTTGCCAAGCAACACTAGCTC 3450990 28 100.0 32 ............................ ATGTAGCCGATGGAAATGCTGTATGAAATGAT 3451050 28 100.0 32 ............................ ATAAGACATCCATTCAGTATCCTCCAAGTGAT 3451110 28 100.0 32 ............................ ATAAATGGAAAGACTCGAAAAATGTTGAACGC 3451170 28 100.0 32 ............................ TCATATCGGTTCACACACTGGATGAATTGCTA 3451230 28 100.0 32 ............................ ACACAAAAGAGCAAATTATTAACGCTTTAAAT 3451290 28 100.0 32 ............................ CAAGGCTTATCAACAGGACTACACAAAATAAA 3451350 28 100.0 32 ............................ ACCAGGAGGACGCAAAAAAACCGACTGGAACG 3451410 28 100.0 32 ............................ TGTTAAATCGACCAAGTCAGGTCTCATTCGTA 3451470 28 100.0 32 ............................ ATTTGCCAAAATTCTCCATTTGTAGGTATTGC 3451530 28 100.0 32 ............................ AAACAAGTCAGGAAAATAAAATGACATTACAT 3451590 28 100.0 32 ............................ AGAATCGTGACCGTTTCCGCGGGCGTTTTTCA 3451650 28 100.0 32 ............................ ATCACGTACGAACTGCACACCGCGAAGTGAAG 3451710 28 100.0 32 ............................ AGTAACGGTTTAAACGCTGAAACAGTATTCAA 3451770 28 100.0 32 ............................ AGACGCATTACTTGTAACACCAGATGAGTTAA 3451830 28 100.0 32 ............................ GCTAAAAACACGGTAATTGACAACATTAGGGG 3451890 28 96.4 32 ........T................... TCAATGAGTGAAAGTGATGCTTGATCAAATTG 3451950 28 100.0 32 ............................ CAATTTTCTGGTCAAGATGCGAATGCTGTATG 3452010 28 100.0 32 ............................ TTAACATGCGTTTAACGATGACAACTCCAAAC 3452070 28 100.0 32 ............................ ATCACTGGTGATATCCACCAGAGAAGCATCAA 3452130 28 100.0 32 ............................ CGATGCAAAACACAATAAACGCTCGTATTTAA 3452190 28 100.0 32 ............................ AGTAGCATAGCCTTCTGCCATACACACAATTT 3452250 28 100.0 32 ............................ AAGAGATTCATGCCGATGGTTTTAAGCCATAT 3452310 28 100.0 32 ............................ ATGTGTAGGAACTTCGCTAGTTCTACACCACC 3452370 28 100.0 32 ............................ TGTTTGCCCTGTCACTACACGATCAAGGGTAA 3452430 28 100.0 32 ............................ GTATCGGAAAATGGGAGTGTGACATGCATAAC 3452490 28 100.0 32 ............................ GGGCGCAAGAATAATGGGGTAGTTCATGAAGC 3452550 28 100.0 32 ............................ TGTAGCATCGCCAGAAATTGAACCATCGGTCG 3452610 28 100.0 32 ............................ TAGCCCCAGATAACTCCGTGCTGTATTGATCC 3452670 28 100.0 32 ............................ CAGGACTCATTACCTGCTTATGATATTCTGGA 3452730 28 100.0 32 ............................ ACGACGACCAGCCAATTCCATGTGAACAGTCT 3452790 28 100.0 32 ............................ CATTTAATTGGGCCACGCTGAAACTGATACAG 3452850 28 96.4 32 ....................C....... CGGTACATGTTTGGCGTGTACATATGATTAAC 3452910 28 96.4 32 ....................C....... GTCAGAACGTGTAGAACCGATAAAACAATTGC 3452970 28 96.4 32 ....................C....... TGCTTAAAGTTCCACTTAAAAACATTATTTTG 3453030 28 96.4 32 ....................C....... CATTAAAAAACCCGCCGAAGCGGGTTTGTGTT 3453090 28 96.4 32 ....................C....... AGTTTCGATTCCAGCGATCGACACTGTTTTGC 3453150 28 100.0 32 ............................ AAGTGGAGTGGTTAAAGTAGATGCTGTTTTTG 3453210 28 100.0 32 ............................ TTCAAATGTTGCTTCACTATCAACCCAAAAAC 3453270 28 100.0 33 ............................ GATTACAAAAAAGCAAGCCGCGGAATATCTTCA 3453331 28 100.0 32 ............................ GCGCATTCATTTGCAGCAGGTCTACGGATTAA 3453391 28 100.0 32 ............................ AAACAATTCAAGCAAATGCAGCAGTTTAATCC 3453451 28 100.0 32 ............................ TTTGGGTGATATGTTGTGGCATATACTGAAAG 3453511 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 90 28 99.8 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTCGCAAGGCTGCAAGATTATGTACATGTCTTATCCGCCCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAGGCACAGGAACACTTTAAAGCATTAGATCTAACGGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAGCTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACGGTACCTGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : ATGCAAACGATGTGTAAAAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //