Array 1 28769-29530 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOJU01000005.1 Fructobacillus tropaeoli strain RD012353 Contig05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 28769 36 100.0 30 .................................... TATCACCTTGCCGACCATTTAATGCCGGAA 28835 36 100.0 30 .................................... TCTATTGCTAATCCGCTGATATAAAGCGCC 28901 36 100.0 30 .................................... ATTATGCGGTTGTCCTATGAGTCAATTAAG 28967 36 100.0 30 .................................... TTTGTCTTGATACCTTTCCATTACTTGCTC 29033 36 100.0 30 .................................... TGGAGTGATGGATAAGAAAGAATTGATTGG 29099 36 100.0 30 .................................... TTTTCAGTAGTTAACATAATGTGCGTTACC 29165 36 100.0 30 .................................... CTCCAAATAAAAATGACCATTTCCATTTTG 29231 36 100.0 30 .................................... TAATTAGTCAGATTGATTCTTTGGAAGATG 29297 36 100.0 30 .................................... ATGCTTGAAGATTTTGTGGCATAGTAACGA 29363 36 100.0 30 .................................... GTATGGGAAATTGATTTCTCACAAGCGCCA 29429 36 100.0 30 .................................... CATTTCTTTGGTAGTGATCGTGAAGGGACT 29495 36 94.4 0 ........................A..........A | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.5 30 GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Left flank : GGTCGGAGGTGGTGATATTAGGAACTATTATAGTAAATTTATTCCTACTATTTTGGAAACAGCAATATCTGATGAGCGACGTGATAAAGCTTATCATTTAAGTATGGAGTTACAATCGCTTCTGGCTGAAGAAATTATTGATAGTAATTTGCCATTCAGAATTGAAAGTGAATGGAACTTAGAAAAAATTATAAAATCACAAAATATTACTGTTGAAAAAAGCAATGTGAATACGATATTTGATAAAATAGAAGATATAGTACACACGATGGGGATGTTAAATGAAGAGCGATATTTGCTATTAACAAACTTATCTTTGTATTGTGATATGTCAGAATTAAATCAACTCCATCAATGCCTTTTAGCTGAAGGTATTAATCTCATATCTCTGAACTTAAGCAGGGAGAACGCCATTAATGATGAAACGTTTAAAGCGAGCTATATTGACCAGGATTTTGTACTTTTTACTTAGTATGTGTCTTGTAACTATTGAGCGGTAG # Right flank : ATGCCGTTAGCGTTTGGTTTGCCAGTTGTTTTAACTGGGTGGACGTTATATATTACCCAAATTTTGTCGAATACGGATCGATTGAACTCATATAGCACAGTTGCCTTAATATCGGAGTAACATGCCCTTGAGATTCAAACTTTCATCGATTAATACTTATTGGGCGAATTATTAGAAAAGACTAGTGCAATAGCTAGTCTTTTTTTGACAAAGTTTTCCTTTTTCTCCCAACTGGTCTATAATCAAATTTACTTATTCTACTTGAAAAGAGGACGAATTGATGAAAATTGGTATTACAGCAGATGCAAATATGCAACAAACAGCCCCGAGCCGATTGAAGTTAGCTGATTACGTTCAAAAGCGCCTAGTGGACGTCTTGGTTAAAAACGACGTGGTTCCGATGATTTTGCCAATTGCTAAGCCAGAAATGGCGAAAGAGATGGTCGGGATGGTGGATGCCATTATCATTCCGGGCGGACCGGATGTTTCACCACACCTTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //