Array 1 8800-7837 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEPN010000009.1 Gemmiger formicilis strain CLA-AA-H284 NODE_9_length_124570_cov_42.335591, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 8799 36 100.0 30 .................................... TCGCCGTTCGCACCTATTGTTGGCTTTACT 8733 36 100.0 31 .................................... TCCGGAATGTACAAATCGCTGCCGGACGCAA 8666 36 100.0 30 .................................... GCAATACAGCCATACCAATTCGGGCATCCC 8600 36 100.0 31 .................................... CCTGATGAAGGAACGGTCCATCAACTGGCAT 8533 36 100.0 30 .................................... TGATGCTGCCTATTGCCGGCATGGCGCTGG 8467 36 100.0 30 .................................... TTACGCTGCGAACTATGTCGCGGCTGTCGT 8401 36 100.0 30 .................................... CTGTGGCTTGGAGGCAAACGCCTTTAGGCC 8335 36 100.0 30 .................................... GCTTCAATGGCAGCACCAGCATGGATGTTA 8269 36 100.0 31 .................................... CAGCATCACAGCGCCGATGAACGCGTCTTGA 8202 36 100.0 30 .................................... TTCTGGTATTCGTCCAAAATGATGAGGTTA 8136 36 100.0 30 .................................... CTGTATTAGCAACTGCTACATTGTTTAGAA 8070 36 100.0 30 .................................... GATTGATTTAGTGGACAGCCCCATAGCCAA 8004 36 100.0 30 .................................... ATGCAAAGCCGTGTACGCGTCTGCCAGGCC 7938 36 100.0 30 .................................... TTTCGCTTAAAAGGCGGACTTCCTGTTTTT 7872 36 94.4 0 .........C.........................T | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.6 30 ATTATACCATACCAAGAGCTATTAGGGAACTATGAC # Left flank : CCTGTTGAATGCGGATATTCTTTCCGGCGGGCAGCACCACAGCGTTGCCTATGCAATGGAACGCCTGGTGCAAGGTCTGCGTGGACAAGCCCTGCTGTTACCCAAATTGCTTGAATACAAGCAGCATAGCTATGAGTAAATTTATGCGGATGATTGTCTTTTTTGACCTGCCTGTGCAGACAAAGACTGAAAGGCGGCATGCGACGGCGTTCCGGAATTTTTTGCTGAAGGACGGATACCACATGCTGCAATTCTCTGTGTACGCGAGGGTGTGCAACGGCAACGACGCCGTGCAGAAACACGAAAGCCGTTTGAGGGCATCCTTGCCGCCAAACGGCTCCATTCGCCTGCTTGTCGTTACAGAAAAGCAGTACCAGTCTATTCAGATTCTTCTGGGAAATTATCAGCCGGAAGAAGCCCCTTTTGTATGTGAACAGTTGAGTTTTTTCTAAAACAAAAAGCGCATCGGACCGCAATCCGATGCGCTTTTTGCATAGCCT # Right flank : TTTCAGAAAATCGATAATATACTCCGATGCATTATACCATATCAGCACAATATGCGCAGAATCTACCACAAATTTTCCCCGCAGGTCTTGCAACGGCCTGCGGGTTTTGTTATAATTTAGGTTTGTTGAGCAACTTAGGATTTTAGGCTCCGCTGCCGGCTGCTGGTCGGCAGCGCAAACCCCGCAAGGCTGGCGGTCTTGCGCGTGGTCAAAATCTATCCGCCGGAGTATTGTATGAATATGAAAAATCTGTCCGTCCGTCGCCTTGTGCGCTGCGCTGTCATTGCGGCTGTCTATGTGGTCGTCTGCCTTGTGCTGGCCCCGTTCAGCTACGGCGCGGTGCAGGTCCGCGTGGCCGAGGCCCTCTGCCTGCTGCCGGTGTTCGGCGCCGAGTATATCGTCGGCGTCACGCTGGGCTGCTTTTTGGCAAATCTGCTCGGCTCCACCGTCGTTGACGTGGTGTTCGGCACGCTGGCGACCCTGCTGGCCTGTCTTGTGAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCATACCAAGAGCTATTAGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //